Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d04
         (576 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5CYL6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.39 
UniRef50_Q14QT5 Cluster: TGF-beta signal transducer SmadD; n=1; ...    36   0.90 
UniRef50_Q2HHK4 Cluster: Putative uncharacterized protein; n=3; ...    36   0.90 
UniRef50_UPI0000D5715D Cluster: PREDICTED: similar to CG13643-PA...    35   1.2  
UniRef50_Q4CYE1 Cluster: Putative uncharacterized protein; n=2; ...    34   2.1  
UniRef50_Q9SGH2 Cluster: T13O15.10 protein; n=2; Arabidopsis tha...    34   2.8  
UniRef50_Q0D9C0 Cluster: Os06g0727900 protein; n=3; Oryza sativa...    34   2.8  
UniRef50_Q9Y4F5 Cluster: Protein KIAA0284; n=22; Eutheria|Rep: P...    32   8.4  

>UniRef50_Q5CYL6 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 103

 Score = 36.7 bits (81), Expect = 0.39
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +1

Query: 244 NRNYSRRTAELHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITEN 411
           N+N  R +  +  +H    +V GNF R S L+ +G K++  S    + LI II EN
Sbjct: 31  NKNVRRPSTFIQRQHIWTNSVRGNFSRRSKLKNQGSKVLNFSNYNKKFLIHIIREN 86


>UniRef50_Q14QT5 Cluster: TGF-beta signal transducer SmadD; n=1;
           Echinococcus multilocularis|Rep: TGF-beta signal
           transducer SmadD - Echinococcus multilocularis
          Length = 719

 Score = 35.5 bits (78), Expect = 0.90
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = +1

Query: 325 SSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQRSHSFNSNAQQK 504
           +S+LRL  + ++  SPLC    +P ++     +Q  + +   EP H+Q+  S  ++A   
Sbjct: 219 ASTLRLSVQSLLDESPLC----VPTLSGGIKPEQTENSTIAYEPAHQQQPTSTIASATTT 274

Query: 505 PKKSCLKTQDA 537
           P    L+  DA
Sbjct: 275 PNPLSLENVDA 285


>UniRef50_Q2HHK4 Cluster: Putative uncharacterized protein; n=3;
            Chaetomium globosum|Rep: Putative uncharacterized protein
            - Chaetomium globosum (Soil fungus)
          Length = 1181

 Score = 35.5 bits (78), Expect = 0.90
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = +1

Query: 343  RGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQRSHSFNSNAQQKPKKSCL 522
            RGEK ++R+ +   +  PI T +TP+++ S GS L+E  H+       S+ Q +  +   
Sbjct: 874  RGEKRIKRADVGLDRCDPIRTASTPKERESAGSPLKELFHQAELDHLKSHDQMQSWREVP 933

Query: 523  KT 528
            +T
Sbjct: 934  RT 935


>UniRef50_UPI0000D5715D Cluster: PREDICTED: similar to CG13643-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13643-PA - Tribolium castaneum
          Length = 815

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
 Frame = +1

Query: 244 NRNYSRRTAELHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITENTPQ- 420
           NRN  + T + +D++  A   + NF++   LR +  + VQ      +   P    N PQ 
Sbjct: 191 NRNGGKETDDDYDDNTNANQNNDNFQKKKLLRKQHRRPVQNDNNNQQNRRPQQQNNRPQN 250

Query: 421 -KQRSDGSRLQEPGHRQR--SHSFNSNAQQK 504
            +Q+++  + Q+P ++Q+  + + N+N QQ+
Sbjct: 251 NQQQNNRPQQQQPNNQQQPNNRAQNNNNQQQ 281


>UniRef50_Q4CYE1 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 524

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 23/92 (25%), Positives = 35/92 (38%)
 Frame = +1

Query: 184 WENFAKWNYETC*CE*LKKMNRNYSRRTAELHDEHCCAANVSGNFRRSSSLRLRGEKMVQ 363
           WE F  W      C   +   R         H   CCA N+       S   +RG     
Sbjct: 123 WEAFPSW------CRDTELQRRRCGGDAVHGHSFVCCAWNLGRVAGELSFPSIRGWAAAY 176

Query: 364 RSPLCTRKLIPIITENTPQKQRSDGSRLQEPG 459
           RSP C R  +P++T +     +++ ++  E G
Sbjct: 177 RSPWCHRYQLPLLTRDGSGGDKNNNNKNGESG 208


>UniRef50_Q9SGH2 Cluster: T13O15.10 protein; n=2; Arabidopsis
            thaliana|Rep: T13O15.10 protein - Arabidopsis thaliana
            (Mouse-ear cress)
          Length = 2176

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 394  PIITENTPQKQRSDGSRLQEPGHRQRSHSFNSNAQQKP 507
            P++T+N P+K  S+ + L+  G    +HS NSNA + P
Sbjct: 1545 PLVTDNLPEKDTSE-TLLKSVGRNHETHSPNSNAVELP 1581


>UniRef50_Q0D9C0 Cluster: Os06g0727900 protein; n=3; Oryza
           sativa|Rep: Os06g0727900 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 550

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -2

Query: 458 PGSWSREPSLRCFCGVFSVIIGINFLVQSGERCTIFSPRSRNDELRRKLPLTLAA-QQCS 282
           PG+  R  + +C   V  +II    L  +G+   +F      ++L R+LPL+LAA ++ +
Sbjct: 10  PGTARRRHARQCRLVVAGLIIVTTLLFFTGDAPRVFIDAPTQNQLPRRLPLSLAAVREAA 69

Query: 281 SW 276
           +W
Sbjct: 70  TW 71


>UniRef50_Q9Y4F5 Cluster: Protein KIAA0284; n=22; Eutheria|Rep:
            Protein KIAA0284 - Homo sapiens (Human)
          Length = 1589

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 345  RRKDGTAFTTLHKEVDSNNHG--KHATKTTQRWFSTPRAGSS 464
            RR+ G+ +T+  +E   + HG  KH    T     TPRAGSS
Sbjct: 1250 RRQQGSDYTSTSEEEYGSRHGSPKHTRSHTSTATQTPRAGSS 1291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,945,343
Number of Sequences: 1657284
Number of extensions: 9355235
Number of successful extensions: 23076
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23068
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)