Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11d04
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    29   0.14 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   4.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   9.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   9.4  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 0.14
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 406 ENTPQKQRSDGSRLQEPGHRQRSHSFNSNAQQKPKKSCLKTQ 531
           +  PQ+Q   G++ Q+   +Q+ H   SNA Q  ++  L+ +
Sbjct: 79  QRQPQRQAVVGTQQQQQRRQQQQHQQRSNATQAQRREQLRNE 120


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 418 QKQRSDGSRLQEPG-HRQRSHSFNSNAQQKPKKS 516
           Q+Q++   + Q P  H+Q+S    S+  Q+P +S
Sbjct: 248 QQQQTHHQQQQHPSSHQQQSQQHPSSQHQQPSRS 281


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 444 SRTIAALFLWRVFRDYWN 391
           SRT+A  F W V   Y N
Sbjct: 180 SRTVARSFKWEVLSSYMN 197


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 2   ILSVKVTVDGLLYVICWFKLNFL 70
           ++ + VTV  +++ ICW   NFL
Sbjct: 487 MIKMMVTVV-IVFTICWLPFNFL 508


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 394 PIITENTPQKQR-SDGSRLQEPGHRQRSH 477
           P+     PQ+Q+ S   + Q PGH Q  H
Sbjct: 157 PVPWYQLPQQQQPSSYHQQQHPGHSQHHH 185


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 369 TTLHKEVDSNN-HGKHATKTTQRWFSTPRAGSSPAESFI 482
           T++  E+ + N H K +  +T    S P + S+P  S +
Sbjct: 501 TSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIV 539


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 369 TTLHKEVDSNN-HGKHATKTTQRWFSTPRAGSSPAESFI 482
           T++  E+ + N H K +  +T    S P + S+P  S +
Sbjct: 502 TSIGSEITTTNTHPKSSASSTSLNHSNPISSSAPPSSIV 540


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,314
Number of Sequences: 2352
Number of extensions: 10181
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)