BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11d04 (576 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 30 1.0 Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.1 Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.1 AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 29 3.1 AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 29 3.1 U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical p... 28 5.5 >AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical protein F53H1.4a protein. Length = 1370 Score = 30.3 bits (65), Expect = 1.0 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +1 Query: 232 LKKMNRNYSRRTAELHDEHC--CAANVSGNFR 321 +KKM + RR EL++E C C N+SGN R Sbjct: 334 VKKMEDAWKRRDLELYNEACSWCEKNLSGNQR 365 >Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein T04F3.1 protein. Length = 3517 Score = 28.7 bits (61), Expect = 3.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 364 RSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQR 471 RSP T ++ TP +RS L EPG R+R Sbjct: 559 RSPARTPATPIVVINQTPSSRRSSQDLLGEPGQRRR 594 >Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein T04F3.1 protein. Length = 3517 Score = 28.7 bits (61), Expect = 3.1 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 364 RSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQR 471 RSP T ++ TP +RS L EPG R+R Sbjct: 559 RSPARTPATPIVVINQTPSSRRSSQDLLGEPGQRRR 594 >AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical protein T04C4.1b protein. Length = 893 Score = 28.7 bits (61), Expect = 3.1 Identities = 24/100 (24%), Positives = 40/100 (40%) Frame = +1 Query: 274 LHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSRLQE 453 L+D +G + +SS+ GE R TRKL +I P + ++ R+ Sbjct: 123 LYDTATVIPTRNGTHQNASSISACGEFQFLRKRKDTRKLSQMIFGAVPNLKTNESFRIHV 182 Query: 454 PGHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLTMTDSA 573 + + A K +K L A + RN + DS+ Sbjct: 183 LEDEETILVSKTFAIPKYRKGALPAAAAAVVRNEALMDSS 222 >AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical protein T04C4.1a protein. Length = 955 Score = 28.7 bits (61), Expect = 3.1 Identities = 24/100 (24%), Positives = 40/100 (40%) Frame = +1 Query: 274 LHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSRLQE 453 L+D +G + +SS+ GE R TRKL +I P + ++ R+ Sbjct: 184 LYDTATVIPTRNGTHQNASSISACGEFQFLRKRKDTRKLSQMIFGAVPNLKTNESFRIHV 243 Query: 454 PGHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLTMTDSA 573 + + A K +K L A + RN + DS+ Sbjct: 244 LEDEETILVSKTFAIPKYRKGALPAAAAAVVRNEALMDSS 283 >U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical protein B0207.11 protein. Length = 273 Score = 27.9 bits (59), Expect = 5.5 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%) Frame = -2 Query: 443 REPSLRCFCGVFSVIIGINFLVQSGERCT--IFSPRSRNDELRRKLPLTL 300 R +L + GV ++ N L + GE +F+P R D + KLPL + Sbjct: 132 RSEALSAYIGVATLNDAENHLTRRGEFALYHLFNPNGRLDTITEKLPLMI 181 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,222,982 Number of Sequences: 27780 Number of extensions: 232965 Number of successful extensions: 595 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 575 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 595 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1194789454 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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