Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c21
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    58   7e-11
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   1.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    22   4.2  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   5.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.3  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.3  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 58.0 bits (134), Expect = 7e-11
 Identities = 26/63 (41%), Positives = 35/63 (55%)
 Frame = +2

Query: 467 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 646
           + V G D P P    E SG   ++   +K  G TKPT IQ    P+ LSG++ +  AQTG
Sbjct: 146 VKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTG 205

Query: 647 TGK 655
           +GK
Sbjct: 206 SGK 208


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 377 TKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEAS 520
           T L  L+ ++ YS+K +++  +   RS     + G  +  PF+  + S
Sbjct: 137 TLLSNLESIQIYSIKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVS 184


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 377 TKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEAS 520
           T L  L+ ++ YS+K +++  +   RS     + G  +  PF+  + S
Sbjct: 93  TLLSNLESIQIYSIKPKERNSNHWVRSGLFALITGNVLFYPFLPSDVS 140


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 467 ITVIGQDIPSPFVDIEASGFPEYIKTFL 550
           I  +  +I   +  +E SGF  ++KT+L
Sbjct: 15  IIFVSLEIYHIYTVVEESGFENFVKTYL 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 505 NKRTGYILTNNS 470
           N R  Y+LTNNS
Sbjct: 389 NSRNNYVLTNNS 400


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IDKNTFPCINMYRKRLNSSVLLYLYGTYAIKPLVSNL*FCF 34
           +D N    I +    + +S   Y++G +A K ++    + F
Sbjct: 370 MDSNDMTAIYVLLINIFASYFAYIFGKFACKIMIQGFSYAF 410


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IDKNTFPCINMYRKRLNSSVLLYLYGTYAIKPLVSNL*FCF 34
           +D N    I +    + +S   Y++G +A K ++    + F
Sbjct: 370 MDSNDMTAIYVLLINIFASYFAYIFGKFACKIMIQGFSYAF 410


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IDKNTFPCINMYRKRLNSSVLLYLYGTYAIKPLVSNL*FCF 34
           +D N    I +    + +S   Y++G +A K ++    + F
Sbjct: 370 MDSNDMTAIYVLLINIFASYFAYIFGKFACKIMIQGFSYAF 410


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = -3

Query: 156 IDKNTFPCINMYRKRLNSSVLLYLYGTYAIKPLVSNL*FCF 34
           +D N    I +    + +S   Y++G +A K ++    + F
Sbjct: 370 MDSNDMTAIYVLLINIFASYFAYIFGKFACKIMIQGFSYAF 410


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 197 DMR*AISMKKFKYE*IKTHFLALICI 120
           D R   SMK FKY  +   F   IC+
Sbjct: 10  DTRSTHSMKNFKYLKVLVTFAHFICL 35


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 565 DTLHLQKCFYIFRKSTGFYVNKRTGYILTNNSNAII 458
           +TL L    +   ++ G  +    GY L   SNAII
Sbjct: 54  ETLRLYPSVHFISRTLGQDLITTGGYTLPKESNAII 89


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -2

Query: 628 HKVFTTQSYWPSL*LYHSWFCDTLHLQKCFYIFRKSTGFYVNK 500
           HK+ T      +L L H       H     Y+F+K   FY  K
Sbjct: 351 HKLLTAPQQCSTLLLRHEGVLAEAHSTNAAYLFQKDK-FYDTK 392


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 243 VSTFKAIFNLFLFLTRHAMSYFNEEV 166
           V T K++F+   FL RH + YF   +
Sbjct: 137 VQTEKSVFD---FLCRHTVEYFQNYI 159


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 449 YRSDNSITVIGQDIPSPFVDIEASGFPEYIKT 544
           Y   ++I +      S F +  +S FP YI+T
Sbjct: 38  YTPSSTIDLYNTSSVSNFNESSSSVFPNYIRT 69


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 449 YRSDNSITVIGQDIPSPFVDIEASGFPEYIKT 544
           Y   ++I +      S F +  +S FP YI+T
Sbjct: 38  YTPSSTIDLYNTSSVSNFNESSSSVFPNYIRT 69


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 331 NNVSVKYICFYYLL 290
           NNVSV Y+   Y+L
Sbjct: 264 NNVSVVYVLILYIL 277


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -1

Query: 395 VALVVLYLLIFDCAI*NIEPWE*CECEIHLFLLFVVCKVII 273
           + L+VL  LIF+        W  C+ +I +FL+    ++II
Sbjct: 58  ILLMVLVNLIFNTCGEVFSAWVRCQDQILIFLVNWYPRLII 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,121
Number of Sequences: 336
Number of extensions: 4178
Number of successful extensions: 22
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)