Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c21
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 60 2e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 54 8e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 50 2e-06
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 45 7e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 44 2e-04
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 42 5e-04
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16) 37 0.014
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 36 0.042
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.042
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 36 0.042
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 36 0.042
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 36 0.042
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 35 0.073
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 34 0.096
SB_47074| Best HMM Match : Ion_trans (HMM E-Value=2.5e-38) 31 1.2
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 30 1.6
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0) 29 2.7
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 29 4.8
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/80 (38%), Positives = 44/80 (55%)
Frame = +2
Query: 416 VKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQG 595
+ + K+E DD R I V G P + GF E + ++ T+PT IQ Q
Sbjct: 488 ITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLEYTQPTQIQCQA 547
Query: 596 WPIALSGKNFVGIAQTGTGK 655
PIALSG++ +GIA+TG+GK
Sbjct: 548 LPIALSGRDIIGIAKTGSGK 567
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = +2
Query: 389 ELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGIT 568
E+++L F + + E D YR +TV G+++P P E S FP+YI+++ K +G T
Sbjct: 46 EIKML-FMDCEARGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFT 104
Query: 569 KPTVIQSQ 592
+PT+IQ+Q
Sbjct: 105 EPTMIQAQ 112
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +2
Query: 443 DDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKN 622
D+ R N I + G+D P P P + T+L + PT IQ Q +SG++
Sbjct: 52 DEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRD 111
Query: 623 FVGIAQTGTGK 655
+G+A+TG+GK
Sbjct: 112 IIGLAETGSGK 122
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Frame = +2
Query: 296 IVETNVFHTHIIPKVQ----YSILHNQILKGTKLRELQIL---RFYSVKTEQKKEDDD-- 448
I T++F + + K + Y + N+ LK K +E ++ R ++ K ++ + D
Sbjct: 23 ITNTSLFLSEELEKEETYYLYYFIRNR-LKKEKDKERKVAFDDRHWTKKNLEEMTERDWR 81
Query: 449 -YRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNF 625
+R D +I+ G IP P + + P+ I + G PT IQ Q PI L ++
Sbjct: 82 IFREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDI 141
Query: 626 VGIAQTGTGK 655
+G+A+TG+GK
Sbjct: 142 IGVAETGSGK 151
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 461 NSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQ 640
+ + + G+ P PF+ + S F EY G+T PT +Q WP L G++ G+A
Sbjct: 177 DEVLIQGESAPRPFLTMNNSTFYEYGPRL----GVTVPTSLQKHMWPSLLRGRDVAGVAI 232
Query: 641 TGTGK 655
G+GK
Sbjct: 233 EGSGK 237
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +2
Query: 452 RSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVG 631
R I V G+ + SP ++ F E + L G PT IQ Q P+ LSG++ +
Sbjct: 179 RDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMV 238
Query: 632 IAQTGTGK 655
A TG+GK
Sbjct: 239 CASTGSGK 246
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 KEDDDYR-SDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIAL 610
+E D++R S +I V G++ P P +G I LK KPT IQ+Q P+ +
Sbjct: 81 EETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIM 140
Query: 611 SGKNFVGIAQTGT 649
SG++ + I T T
Sbjct: 141 SGRDMIAIVMTPT 153
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = +2
Query: 518 SGFPEYIKTF--LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
S FP +T L G PT IQ QG P+ALSG++ +G A+TG+GK
Sbjct: 53 SDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGK 100
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +2
Query: 347 SILHNQILKGTKLRELQILRFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVD----IE 514
SI Q G K +E ++ + Q+K + +R + I V G D+P P IE
Sbjct: 108 SIFTEQNPHGKKQKENKLSANKLAEKHQEKINL-FRHEQHIYVKGADVPDPVETFSQLIE 166
Query: 515 ASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSG 616
GFP+YI ++ +G T PT IQ Q P+ G
Sbjct: 167 RYGFPDYIIHNVQERGYTTPTPIQMQATPLMAHG 200
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 443 DDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKN 622
D+Y + S V G++ P F E + + G +PT +Q PI ++G++
Sbjct: 460 DNYENIPS-KVSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRD 518
Query: 623 FVGIAQTGTGK 655
+ AQTG+GK
Sbjct: 519 LMACAQTGSGK 529
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 419 KTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGW 598
+T++K++ D ++ V G I P + E G I L QG +KPT IQS
Sbjct: 104 ETQEKEKGGDAEGLSNQKVKGSLIDMP--EWEGLGVAPDILRALGDQGFSKPTPIQSLSI 161
Query: 599 PIA-LSGKNFVGIAQTGTGK 655
P A L ++ +G A+TG+GK
Sbjct: 162 PPALLYHRDIIGAAETGSGK 181
>SB_19376| Best HMM Match : RVT_1 (HMM E-Value=6.7e-16)
Length = 274
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -3
Query: 273 LDNSFRFNNLVSTFKAIFNLFLFLTRHAMSYFNEEV*IRIDKNTFPCINMYRKRLNSSVL 94
L N+FRF+ LV+ +KA+F+ A+ F+E+V +++D N P + R+ L + L
Sbjct: 19 LSNAFRFHELVTEYKAVFD------NTAVGCFSEKVNLKVDGNAVPTQSPPRRSLGNEAL 72
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 548 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
LK GITKP IQ + P S K+ + ++TGTGK
Sbjct: 175 LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGK 210
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 512 EASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
EA+ + ++ K Q KPT +Q PI ++G++ + AQTG+GK
Sbjct: 715 EANLYEAFLNNVRKAQ-YKKPTPVQKYSIPIVIAGRDVMACAQTGSGK 761
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 557 QGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
+G KP+ IQ + P+AL+G++ + A+ GTGK
Sbjct: 65 KGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 35.5 bits (78), Expect = 0.042
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 512 EASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
EA+ + ++ K Q KPT +Q PI ++G++ + AQTG+GK
Sbjct: 138 EANLYEAFLNNVRKAQ-YKKPTPVQKYSIPIVIAGRDVMACAQTGSGK 184
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 557 QGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
+G KP+ IQ + P+AL+G++ + A+ GTGK
Sbjct: 65 KGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 521 GFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
G +++ + GI KPT IQ P L G++ +G A+TG+GK
Sbjct: 13 GLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGK 57
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 560 GITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
G PT IQ+ P+AL GK+ A TGTGK
Sbjct: 29 GFLHPTPIQASTIPVALMGKDVCACAATGTGK 60
>SB_47074| Best HMM Match : Ion_trans (HMM E-Value=2.5e-38)
Length = 467
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 128 ICIASG*IVLYCYIFMVPMLLNHLYQIYNFA 36
IC SG ++L+C F P+LL+H ++Y+ +
Sbjct: 400 ICAVSGIVILFC--FPTPVLLSHFEEMYSLS 428
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 554 MQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
+ G KPT +Q PI ++ + AQTG+GK
Sbjct: 892 LAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGK 925
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 557 QGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
+G KP+ IQ + L G++ + AQ+GTGK
Sbjct: 15 EGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGK 47
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 532 IYKNISEDARYHKTNCDTVTGMANSFEW*KLCGYSTNRYR---KTLAFLLPAVV 684
I KN E H+ + V +A W CGY NRY+ TLA L+ VV
Sbjct: 115 IAKNSLEGDSSHELSARVVLELAGRGAWYLGCGYILNRYKDDPDTLAHLVTTVV 168
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 548 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
+K G T T IQ + L G++ +G A+TG+GK
Sbjct: 587 IKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGK 622
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +2
Query: 422 TEQKKEDDDYRSDNSITVIGQDIPSPFVDI---EASGFPEYIKTFLKMQGITKPTVIQSQ 592
T+Q+ ++ + SD + Q + +D+ E G I L QG +KPT IQS
Sbjct: 43 TQQESQEKEKGSDAE-GLSNQKVQGSLIDMSEWEGLGVAPDILRALGDQGFSKPTPIQSL 101
Query: 593 GWPIA-LSGKNFVGIAQT 643
P A L ++ +G A+T
Sbjct: 102 SIPPALLYHRDIIGAAET 119
>SB_4812| Best HMM Match : Sulfatase (HMM E-Value=0)
Length = 1040
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 532 IYKNISEDARYHKTNCDTVTGMANSFEW 615
+ NI ED R HK+N D+V + F W
Sbjct: 980 VVDNILEDLRRHKSNVDSVPSQIDYFWW 1007
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 548 LKMQGITKPTVIQSQGWPIALSGKNFVGIAQTGTGK 655
L G KP+ IQ + P+ G + + A++GTGK
Sbjct: 28 LNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGK 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,924,566
Number of Sequences: 59808
Number of extensions: 423847
Number of successful extensions: 881
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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