Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c21
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    49   1e-07
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    24   5.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 49.2 bits (112), Expect = 1e-07
 Identities = 24/63 (38%), Positives = 35/63 (55%)
 Frame = +2

Query: 467 ITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVIQSQGWPIALSGKNFVGIAQTG 646
           + V G++ P      E SG  E + T ++    TKPT IQ    PI L+G++ +  AQTG
Sbjct: 162 VRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTG 221

Query: 647 TGK 655
           +GK
Sbjct: 222 SGK 224


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 529 RKSTGFYVNKRTGYILTNNSNAIIT 455
           R  TG +V  R     TNN+N IIT
Sbjct: 198 RGETGNWVQHRAQRNRTNNNNTIIT 222


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 615 PLKAIGHPCDCITVGFVIPCIFRNVFI 535
           P  + GH CD +   F+   + R +FI
Sbjct: 367 PKLSQGHKCDVVAATFLDVAVLRCLFI 393


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,035
Number of Sequences: 2352
Number of extensions: 15545
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)