Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c17
         (637 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.81 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     25   0.81 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.6  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 308 HKKTEENEILSKGQEVSGNIFYMKQNISNACGTIAL 415
           H+K ++  I  +    + N FY K N SN+  +  L
Sbjct: 123 HQKLDQKFIFPQENNYNDNYFYSKSNGSNSSNSDVL 158


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 364 YFLYETKYQQCMWDYSSCT 420
           YF++E+     +WD+  CT
Sbjct: 104 YFVHESLKNVLLWDFQECT 122


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 113 EMATETLVPLESNPDVLNKFLQK 181
           ++  E LVPLE N  + NK+  K
Sbjct: 863 KIVPEELVPLEGNLMINNKYALK 885


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 439 RIVGHTMYKSYSPTCIADIL 380
           R +G+ ++ +Y PTC+  I+
Sbjct: 242 RRLGYYLFHTYIPTCLIVIM 261


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 122 TETLVPLESNPDVLNKFLQKLG 187
           T+TL  L  +PD L K  Q  G
Sbjct: 889 TQTLDKLIRSPDTLRKIAQNRG 910


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 286 WEK*HYRKHRARYPRKRFRIK 224
           W+K   +K  ++ PR++F  K
Sbjct: 427 WKKGRDKKSTSKKPRRKFHFK 447


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,291
Number of Sequences: 438
Number of extensions: 3427
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)