Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c15
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 185 3e-47
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 171 3e-43
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 166 1e-41
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 91 5e-19
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 91 5e-19
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 85 3e-17
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 84 7e-17
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 71 5e-13
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 68 7e-12
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 67 1e-11
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 64 8e-11
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 60 1e-09
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical pr... 36 0.033
AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical ... 31 0.93
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 2.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 2.1
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 29 3.8
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 29 3.8
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 29 3.8
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 29 3.8
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 6.6
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 6.6
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 6.6
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 27 8.7
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu... 27 8.7
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu... 27 8.7
U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon gu... 27 8.7
U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon gu... 27 8.7
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO... 27 8.7
AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFOR... 27 8.7
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 185 bits (450), Expect = 3e-47
Identities = 81/151 (53%), Positives = 111/151 (73%)
Frame = +3
Query: 195 TTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPE 374
+TG F+LT +Q + RKF DE+IPVAG+YDKT EYPW ++KKA G + IPE
Sbjct: 21 STGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEIIKKAHAQGYLIADIPE 80
Query: 375 HCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEP 554
GG+ + + C+++EE+AYGC+GI TA+ A+ L TP+I+ N + +K++LGR+ID P
Sbjct: 81 AYGGLGVDMVSNCIISEEMAYGCSGIATAIMANDLALTPLILCANDDIKKRFLGRMIDNP 140
Query: 555 LVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 647
VA+Y VTEPGAGSDVAG+KT+ EKKGDE+I
Sbjct: 141 FVASYAVTEPGAGSDVAGVKTKCEKKGDEYI 171
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 171 bits (417), Expect = 3e-43
Identities = 75/146 (51%), Positives = 106/146 (72%)
Frame = +3
Query: 210 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 389
F+L++ QK +Q+ A KF+KD ++P A ++D++GE+PW +V++A +GLMN IPE GG
Sbjct: 29 FDLSETQKEIQDAALKFSKDVLVPNAAKFDESGEFPWEIVRQAHSLGLMNPQIPEKYGGP 88
Query: 390 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAY 569
M + L+ E L+YGCTGI + L P+ I+GN+EQ+KKYLG L EP++A+Y
Sbjct: 89 GMTTLETALIVEALSYGCTGIQLGIMGPSLAIAPVYISGNEEQKKKYLGALAAEPIIASY 148
Query: 570 GVTEPGAGSDVAGIKTRAEKKGDEWI 647
VTEPGAGSDV G+KT+ EKKGDE+I
Sbjct: 149 CVTEPGAGSDVNGVKTKCEKKGDEYI 174
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 166 bits (404), Expect = 1e-41
Identities = 75/146 (51%), Positives = 104/146 (71%)
Frame = +3
Query: 210 FELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 389
FEL+D QK +Q A KF+KD ++P A ++DK+GE+PW +VK+A +G MN IPE GG
Sbjct: 23 FELSDTQKEIQSHAIKFSKDVLVPNAAKFDKSGEFPWEIVKQAHSLGFMNTIIPEKYGGP 82
Query: 390 DMGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAY 569
+ D L+ E L+YGC+G+ A+ L PI ++G +EQ+KKYLG L EP++A+Y
Sbjct: 83 GLSNLDTALIVEALSYGCSGLQIAIFGPSLAAAPICLSGTEEQKKKYLGMLAAEPIIASY 142
Query: 570 GVTEPGAGSDVAGIKTRAEKKGDEWI 647
VTEPGAGSDV G+KT+A K+GDE+I
Sbjct: 143 CVTEPGAGSDVNGVKTKAVKQGDEYI 168
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 91.5 bits (217), Expect = 5e-19
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Frame = +3
Query: 192 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 365
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 366 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRL 542
P GG M F + EEL+ GI + A S L I+ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 543 IDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 647
I + A ++E AGSDV +K RAEKKGD+++
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYV 185
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 91.5 bits (217), Expect = 5e-19
Identities = 57/155 (36%), Positives = 81/155 (52%), Gaps = 3/155 (1%)
Frame = +3
Query: 192 PTTGFCFELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPW--PVVKKAWEVGLMNGH 365
P F L DE+ AL++ R+F E+ P A + DK + P KK + GL+
Sbjct: 31 PIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGWDQLRPFWKKLGDQGLLGIT 90
Query: 366 IPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRL 542
P GG M F + EEL+ GI + A S L I+ G++EQ+KKYL +L
Sbjct: 91 APAEYGGSGMNYFSHVIAMEELSRAAGGIALSYGAHSNLCINQIVRNGSEEQRKKYLPKL 150
Query: 543 IDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 647
I + A ++E AGSDV +K RAEKKGD+++
Sbjct: 151 ISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYV 185
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 85.4 bits (202), Expect = 3e-17
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Frame = +3
Query: 213 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMD 392
+L++E+ ++ R+F + I P+ + D + V+ +E GLM IPE GG
Sbjct: 39 QLSEEESSIVGTVRRFAVNVIKPLVREMDDKSQMHQSVITGTFENGLMGIEIPEKYGGPG 98
Query: 393 MGVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIII-AGNKEQQKKYLGRLIDEPLVAAY 569
FD LV EELA + ++ P+II G +EQ++KYL +++ E + ++
Sbjct: 99 SSFFDAVLVIEELAKVDPSVSVFVDVQNTLVAPLIIQLGTEEQKQKYLPKIVTE-AIGSF 157
Query: 570 GVTEPGAGSDVAGIKTRAEKKGDEWI 647
++E G+GSD +KT A+K GD+++
Sbjct: 158 ALSETGSGSDAFALKTTAKKDGDDFV 183
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 84.2 bits (199), Expect = 7e-17
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Frame = +3
Query: 216 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 395
LT+ + + RKF+KD + P+ + DK + V + +E GLM H+PE GG
Sbjct: 48 LTENELFFADTVRKFSKDVVKPLVREMDKYSKMSPIVTQGVFENGLMGVHVPEEYGGSGS 107
Query: 396 GVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYG 572
F+ +V EELA + + + L + II G +EQ+ KYL RL + L A++
Sbjct: 108 SFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKYLPRLCSDSL-ASFC 166
Query: 573 VTEPGAGSDVAGIKTRAEKKGDEWI 647
++E GAGSD +KT A++ GD ++
Sbjct: 167 ISESGAGSDAFALKTIAKRDGDHFL 191
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 71.3 bits (167), Expect = 5e-13
Identities = 40/135 (29%), Positives = 66/135 (48%)
Frame = +3
Query: 243 ELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVA 422
E A +F K E+ P +DK GE P V++KA E+G + GG + ++
Sbjct: 36 EAAHQFAKKEMYPKMADWDKQGELPMDVLRKAGEMGFGAIYCSGDHGGSGLSRLHASVIF 95
Query: 423 EELAYGCTGIMTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDV 602
E+L+ GC + + + G ++ ++ L + + +Y +TEP AGSD
Sbjct: 96 EQLSMGCVSTAAYISIHNMCAWMLDTYGPEKLKEDLLPDMAVFKKLGSYCLTEPDAGSDA 155
Query: 603 AGIKTRAEKKGDEWI 647
A I+T A KKGD ++
Sbjct: 156 ASIRTTATKKGDYYV 170
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 67.7 bits (158), Expect = 7e-12
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 297 DKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASG 476
D+T E V+ +E GLM +PE GG FD LV EE++ + ++
Sbjct: 2 DRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATFFDAALVIEEISKVDASVGAMVDVHN 61
Query: 477 LGQTPIII-AGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 647
P+II G ++Q++KYL + V ++ ++E G+GSD +KT A+K GD+++
Sbjct: 62 TLFIPLIIELGTEKQKEKYLPKCYTSS-VGSFALSETGSGSDAFALKTTAKKDGDDYV 118
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 66.9 bits (156), Expect = 1e-11
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +3
Query: 216 LTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGMDM 395
L + +K L E + F + + P+ + D+ ++KKA+++ LM I GG +
Sbjct: 36 LNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLKIDPKYGGSGV 95
Query: 396 GVFDGCLVAEELAYGCTGIMTAMEASGLGQTPIIIA-GNKEQQKKYLGRLIDEPLVAAYG 572
F+ L EEL+ I M P+I GN+E ++KYL +L + V A+
Sbjct: 96 SFFELVLAVEELSKIDPAIALIMHLQNALVAPLIEEFGNEELKEKYLKKLCKDS-VGAFA 154
Query: 573 VTEPGAGSDVAGIKTRAEKKGDEWI 647
++E +GSD ++T A+K GD +I
Sbjct: 155 LSEVVSGSDAFAMQTVAKKDGDHFI 179
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 64.1 bits (149), Expect = 8e-11
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +3
Query: 234 ALQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGMDMGVFDG 410
A+Q K K++I P Q++K+G YP V K ++G+ + P GG
Sbjct: 31 AMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQLGVFAVNKPVDYGGTGRDFAMS 90
Query: 411 CLVAEEL-AYGCTGI-MTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEP 584
+AE++ A C I M+ M S + + G+ + ++L I+ LV++ V+EP
Sbjct: 91 IAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEP 150
Query: 585 GAGSDVAGIKTRAEKKGDEWI 647
AGSDV+ I+T A + G + I
Sbjct: 151 HAGSDVSAIRTHARRYGSDLI 171
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +3
Query: 354 MNGHIPEHCGGMDMGVFDGCLVAEELAYGCTGIMTAMEASG-LGQTPIIIAGNKEQQKKY 530
M H+PE GG F+ +V EELA + + L + II G +EQ+ KY
Sbjct: 1 MGVHVPEEYGGSGSSFFNAMIVIEELAKTDPSVSAMVGIHNTLPVSMIIDYGTEEQKLKY 60
Query: 531 LGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGDEWI 647
L RL + L A++ ++E GAGSD +KT A++ GD ++
Sbjct: 61 LPRLCSDSL-ASFCISESGAGSDAFALKTIAKRDGDHFL 98
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Frame = +3
Query: 237 LQELARKFTKDEIIPVAGQYDKTGEYPWPVV-KKAWEVGLMNGHIPEHCGGMDMGVFDGC 413
+Q+ K +++I P ++++ G YP +V K + G+ + PE GG +
Sbjct: 66 MQKSLGKLIEEKINPNVAKWEQDGRYPAHLVFKMLGDHGVFGVNKPEAFGGTGTDIAMAT 125
Query: 414 LVAEEL-AYGCTGI-MTAMEASGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPG 587
+AE++ A C I M+ M + + + G+ ++++L I LV++ V+EP
Sbjct: 126 AIAEQMGAINCGSIPMSVMVQTDMSTPALAQFGSDALRERFLRPSITGDLVSSLAVSEPH 185
Query: 588 AGSDVAGIKTRAEKKGDEWI 647
AGSDV+ + T A ++G + I
Sbjct: 186 AGSDVSAVHTHARRQGSDLI 205
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +3
Query: 216 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 389
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 390 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 566
VAE + G M A +G I++ G Q++KYL L AA
Sbjct: 123 GFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAA 182
Query: 567 YGVTEPGAGSDVAGIKTRAEKKGD 638
+ +TEP GSD + ++TRAE D
Sbjct: 183 FALTEPTTGSDASSVRTRAELSAD 206
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +3
Query: 216 LTDEQKALQELARKFTKDEIIPVAG--QYDKTGEYPWPVVKKAWEVGLMNGHIPEHCGGM 389
+TDEQK + + ++ V + D+T + P V+ + E+G +P G
Sbjct: 63 MTDEQKETLGMVMSPLEKMLVEVNDVVKNDETSDIPRAVLDQFAELGTFGVLVPPELEGS 122
Query: 390 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 566
VAE + G M A +G I++ G Q++KYL L AA
Sbjct: 123 GFNNSQMARVAEIVGAYDLGFGVVMGAHQSIGYKGILLEGTDAQKQKYLPDLATGRKFAA 182
Query: 567 YGVTEPGAGSDVAGIKTRAEKKGD 638
+ +TEP GSD + ++TRAE D
Sbjct: 183 FALTEPTTGSDASSVRTRAELSAD 206
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 54.8 bits (126), Expect = 5e-08
Identities = 33/139 (23%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +3
Query: 213 ELTDEQKALQELARKFTKDEIIPVAGQYDKTGEYPWPVVKKAWEVGLMNGHIPEH-CGGM 389
+LT+++++L AR++ ++ ++P + +T ++ ++ + +GL+ + C G
Sbjct: 31 QLTEDERSLMLSAREYCQERLLPRVTEAYRTEKFDPSLIPEMGSMGLLGAPYQGYGCAGT 90
Query: 390 DMGVFDGCLVAEELAYGCTGIMTAMEA-SGLGQTPIIIAGNKEQQKKYLGRLIDEPLVAA 566
+ L+A E+ +G + M + L PI G+++Q++KY+ L +
Sbjct: 91 STVGYG--LIAREVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGC 148
Query: 567 YGVTEPGAGSDVAGIKTRA 623
+G+TEP GS+ G++T+A
Sbjct: 149 FGLTEPNHGSNPGGMETKA 167
>Z99710-5|CAB16866.1| 662|Caenorhabditis elegans Hypothetical
protein F08A8.4 protein.
Length = 662
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 492 IIIAGNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRA 623
++ +KEQQ+K+LGR ++ Y TE G G+++ ++T A
Sbjct: 123 LVSQASKEQQEKWLGRARRREIIGCYAQTEMGHGTNLRKLETTA 166
>Z99710-4|CAB16865.1| 660|Caenorhabditis elegans Hypothetical
protein F08A8.3 protein.
Length = 660
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 489 PIIIA-GNKEQQKKYLGRLIDEPLVAAYGVTEPGAGSDVAGIKTRAEKKGD 638
P ++A ++EQQ+K+LGR + ++ Y TE G G+++ ++T A D
Sbjct: 119 PTLVAQASQEQQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPD 169
>AL033514-6|CAA22096.2| 373|Caenorhabditis elegans Hypothetical
protein Y75B8A.6 protein.
Length = 373
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 426 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPP 304
P PQ HP P+H V S P LQ A+ TPP
Sbjct: 15 PPPQMLQMHHPLPHHVAVFAHGSSSQNSQAPPLQAASATPP 55
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 478 SPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 299
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1597 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1651
Query: 298 -SY*PAT 281
SY P++
Sbjct: 1652 PSYSPSS 1658
Score = 27.5 bits (58), Expect = 8.7
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -2
Query: 607 PATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVWPSPLA-SIAVIIPVH-PY 434
P+ +PG +P ++ S++ P Y + SP++ S + P + P
Sbjct: 1565 PSYGGMSPGVYSP--SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPT 1622
Query: 433 ASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 281
+ S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1623 SPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1672
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 436 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 305
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1758 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1801
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -2
Query: 478 SPLASIAVIIPVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL 299
SP + A PV P S ++ PS +P S P S P PTS ++ T YSP
Sbjct: 1604 SPTSPAAGQSPVSPSYSPTS---PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTS 1658
Query: 298 -SY*PAT 281
SY P++
Sbjct: 1659 PSYSPSS 1665
Score = 27.5 bits (58), Expect = 8.7
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = -2
Query: 607 PATSDPAPGSVTP*AATNGSSISLPRYFFCCSLFPAIMMGVWPSPLA-SIAVIIPVH-PY 434
P+ +PG +P ++ S++ P Y + SP++ S + P + P
Sbjct: 1572 PSYGGMSPGVYSP--SSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPT 1629
Query: 433 ASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSPVL-SY*PAT 281
+ S + PS +P S P S P PTS ++ + YSP SY P++
Sbjct: 1630 SPSYSPTSPSYSPTS--PSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSS 1679
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 436 YASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQAFFTTGHGYSP 305
Y SS T P++ PQ S P PTS ++ + YSP
Sbjct: 1765 YTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSP 1808
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 433 HTDAPEL*PQWKPVDLAKLPSLLLEIRS 516
H P W PV A LPSL EIRS
Sbjct: 123 HLTVPSAISTWFPVQYAVLPSLFFEIRS 150
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical protein
T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 490 GVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 389
G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1335 GLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 490 GVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 389
G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1335 GLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 490 GVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 389
G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1212 GLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1246
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 490 GVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 389
G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1335 GLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -2
Query: 490 GVWPSPLASIAVIIPVHPYA-SSSATRQPSNTPMS 389
G+ SP S++V+IP HP+ S ++ R S +P S
Sbjct: 1335 GLTVSPRQSLSVVIPTHPHGHSPTSPRCRSRSPAS 1369
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 448 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 335
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 448 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 335
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 87 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 119
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 448 PVHPYASSSATRQPSNTPMSIPPQCSGMCPFIRPTSQA 335
P HPY+ SS P++ + PPQ I PT QA
Sbjct: 132 PSHPYSISSQQSSPAHPSSAFPPQWP-----ITPTDQA 164
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 426 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 280
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 426 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 280
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -3
Query: 426 PQPQDNHQTHPCPYHRNVLECVRSLGQLPKPSLQRATGTPPSYHIDPPQ 280
PQPQ Q P Y R ++ G LP P T PP + P+
Sbjct: 178 PQPQPQQQPQPPCYQRQPEPPRQTGGCLPGPYYSPNTMAPPQHQQPYPE 226
>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform a protein.
Length = 1144
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform d protein.
Length = 1147
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>U50067-2|AAY86218.1| 1328|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform b protein.
Length = 1328
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>U50067-1|AAZ32800.1| 1331|Caenorhabditis elegans Sensory axon
guidance protein 7,isoform c protein.
Length = 1331
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
protein.
Length = 1147
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 268 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 327
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 328 EGEYECIGTNKYGQATGL 345
>AB206669-1|BAD97388.1| 1331|Caenorhabditis elegans SAX-7 LONGFORM
protein.
Length = 1331
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 264 KDEIIPVAGQYD--KTGEYPWPVVKKAWEVGLMNG----HIPEHCGGMDMGVFDGCLVAE 425
K+E+ VAG+ + + P WE +++G IP G+ VF AE
Sbjct: 452 KEEVEAVAGKKVTLECKFFASPNAAVKWEAPMISGSKGNQIPADAYGVGKLVFSEVTAAE 511
Query: 426 ELAYGCTGIMTAMEASGL 479
E Y C G +A+GL
Sbjct: 512 EGEYECIGTNKYGQATGL 529
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,105,320
Number of Sequences: 27780
Number of extensions: 340207
Number of successful extensions: 966
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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