Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c14
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1348 + 25945444-25945551,25946411-25946607,25946732-259468...    32   0.43 

>07_03_1348 +
           25945444-25945551,25946411-25946607,25946732-25946804,
           25947003-25947092,25947410-25947465,25947559-25947738,
           25947813-25948006,25948095-25948234,25948324-25948466,
           25948549-25948697,25948784-25949148,25949264-25949368
          Length = 599

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -3

Query: 248 NNSYLEMTSPAQTRPTFTP--DDVIGQKWLANYRVLIL 141
           N S +E TSPA T PTF P  DD+   K+ A+ R  +L
Sbjct: 534 NPSCIEFTSPAHTVPTFLPYADDMPTPKFTASERNFLL 571


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,989
Number of Sequences: 37544
Number of extensions: 246783
Number of successful extensions: 400
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)