Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c13
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72517-4|CAA96692.1| 105|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z93383-4|CAB07626.1| 96|Caenorhabditis elegans Hypothetical pr... 32 0.30
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 30 1.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 2.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 2.1
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacti... 29 2.8
Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.7
AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 29 3.7
Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC006733-5|AAF60485.2| 193|Caenorhabditis elegans Hypothetical ... 28 4.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 6.5
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 27 8.6
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 27 8.6
AF067947-6|AAO25992.1| 255|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 27 8.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z72517-4|CAA96692.1| 105|Caenorhabditis elegans Hypothetical
protein T28F4.5 protein.
Length = 105
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Frame = +1
Query: 88 IMSSTEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPIS 267
+M + +++K GHPPA K GG R+ K + DS + AN + G V I
Sbjct: 1 MMDNNITETEMKVGHPPANKVGGRRVVNRKDRKNSDSNDNANSE-----GSDEVVREIID 55
Query: 268 IAGAPNKGNADFTPEAAQVAH-SPKP---PAHINLRPSPNIQ--QPRK 393
P K + EA + H P P P HIN + + QPRK
Sbjct: 56 Y-DLPAKMERSYPTEAVKKVHEKPMPAIQPVHINRDANSGVHRFQPRK 102
>Z93383-4|CAB07626.1| 96|Caenorhabditis elegans Hypothetical
protein F54B8.4 protein.
Length = 96
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/94 (24%), Positives = 37/94 (39%)
Frame = +1
Query: 100 TEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGA 279
++E + GH PA K GG RI H +++S ++ + P A
Sbjct: 2 SKEDNNAVVGHQPATKVGGRRIADHGNQRAQNSTNSSDAVREAMDFDLPAKMEKAYPTAA 61
Query: 280 PNKGNADFTPEAAQVAHSPKPPAHINLRPSPNIQ 381
+ + TP A Q AH + + +R P Q
Sbjct: 62 VKQVHEKPTP-AIQPAHYNRATGNGQVRNIPQKQ 94
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Frame = +1
Query: 94 SSTEETSQLKAGHP-PAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSG-----PSPVPS 255
++T ET+ A P PA +A P + PA ++ + P+P P+
Sbjct: 519 AATLETAPAPAAEPAPAAEAAAGYDAPSSVPEETPAPAPAADETPAPAPAAEETPAPAPA 578
Query: 256 NPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPSPNIQQ 384
+ A AP T AA+ +P P A P+P ++
Sbjct: 579 AEETPAPAPAAEETPATAPAAEETPAPAPAADETPAPAPAAEE 621
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Frame = +1
Query: 109 TSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPAN--EDLTGLSGPSPVPSNPISIAGAP 282
TS A + + + PH + S P+ D+T P P P++ I GAP
Sbjct: 49 TSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVTSAHAPPP-PASSAPIVGAP 107
Query: 283 NKGNADFTPEAAQVAHSPKPPAHIN--LRPSPNIQQP 387
+G TP+AA H P P + +P
Sbjct: 108 RQG---ATPQAAPATTPATTSQHQQSIATPKPPVVRP 141
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/84 (22%), Positives = 29/84 (34%)
Frame = +1
Query: 136 PAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEA 315
PA R+ H ++ P + G++ P+P APN G + P A
Sbjct: 555 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQ-------APNYGTPENRPHA 607
Query: 316 AQVAHSPKPPAHINLRPSPNIQQP 387
P PP + P + P
Sbjct: 608 VPPPPPPPPPQSFGMAPISSAAPP 631
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/84 (22%), Positives = 29/84 (34%)
Frame = +1
Query: 136 PAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEA 315
PA R+ H ++ P + G++ P+P APN G + P A
Sbjct: 381 PAAPPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQ-------APNYGTPENRPHA 433
Query: 316 AQVAHSPKPPAHINLRPSPNIQQP 387
P PP + P + P
Sbjct: 434 VPPPPPPPPPQSFGMAPISSAAPP 457
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 29.1 bits (62), Expect = 2.8
Identities = 31/89 (34%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 133 PPAVKAGGMRITQ--HKTPHSKDSK-EPANEDLTGLSGPSPVPSNPISIAGAPNKGNADF 303
PP A +R Q H H ++ +PA + G SPV NP A G++
Sbjct: 502 PPPPPAEALRADQPRHSLIHEVGAQADPA--EANGAQALSPVLPNPNE--RADEHGHSPV 557
Query: 304 TPEAAQVAHSPKPPAHINLRPSPNIQQPR 390
AQ SP PPA N P PN QQP+
Sbjct: 558 IDNEAQP--SP-PPAEANRAPIPN-QQPQ 582
>AF016430-2|AAB65371.1| 1106|Caenorhabditis elegans Gex interacting
protein protein 6 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 172 HKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNA---DFTPEAAQVAHSPKP 342
H+ + K P ++ +SGP P+P P+ +P NA F P + P+P
Sbjct: 1016 HRAQDTPFGKVPIQDNFA-MSGPRPMPPRPMPPQQSPFFNNAPGNGFYPPQPRDFSPPQP 1074
Query: 343 PAHINLRP 366
P + P
Sbjct: 1075 PQQSRMFP 1082
>Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +1
Query: 205 PANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPA 348
P N G S +PVPS PIS A +P A P AA A PPA
Sbjct: 349 PYNSVAAGRSTTTPVPSTPIS-ANSPAPSLAQAAPIAA--ASPVFPPA 393
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 169 QHKT-PHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPP 345
QH + P S + +P + + + P P P P P + +FTP + P PP
Sbjct: 743 QHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHC---EPTMVHVEFTPPSTSSVPPPPPP 799
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +1
Query: 169 QHKT-PHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPP 345
QH + P S + +P + + + P P P P P + +FTP + P PP
Sbjct: 743 QHPSLPRSASTPQPIQQQQSSIPPPPPPPPPPHC---EPTMVHVEFTPPSTSSVPPPPPP 799
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 190 KDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPS 369
K K+ +++DLTG S S + S + + N+ F+P A H+ +N P
Sbjct: 133 KSIKQQSDQDLTGGSSRSGWGTGENSSLESSDLINSHFSPIAKTFRHASDLDDSMNTSPP 192
Query: 370 PN 375
PN
Sbjct: 193 PN 194
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 166 TQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAA 318
TQ P + EP ED+ + PS + AP++ D EAA
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAA 3613
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 166 TQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAA 318
TQ P + EP ED+ + PS + AP++ D EAA
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAA 3613
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 166 TQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAA 318
TQ P + EP ED+ + PS + AP++ D EAA
Sbjct: 3563 TQEDVPKEEAPSEPTQEDVPKEAAPSEPTQENVPKEAAPSEPTKDVPKEAA 3613
>AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical
protein Y56A3A.1a protein.
Length = 701
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +1
Query: 205 PANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPA 348
P N G S +PVPS PIS A +P A P AA A PPA
Sbjct: 349 PYNSVAAGRSTTTPVPSTPIS-ANSPAPSLAQAAPIAA--ASPVFPPA 393
>Z48009-2|CAA88077.1| 230|Caenorhabditis elegans Hypothetical
protein AH6.3 protein.
Length = 230
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +1
Query: 94 SSTEETSQLKAGHPPAVKAGGMR----ITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNP 261
+STE S L PP A + + K P D K+P ++D+ P P S
Sbjct: 32 ASTESVSPLNEPKPPPQSAVPQKPAAPAAEEKAP--VDPKDPKSKDVDEAKKPDPANSKK 89
Query: 262 ISIAGAPNKGN 294
+ + P KG+
Sbjct: 90 SNKSKKPEKGS 100
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 73 QNYQTIMSSTEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTG 228
Q YQ + + TE S + G+ ++ GG + + HK +KD K E G
Sbjct: 848 QRYQKLGNGTE--SSMDVGYEKSMAKGGDQTSSHKKTLAKDGKGHFTETKDG 897
>AC006733-5|AAF60485.2| 193|Caenorhabditis elegans Hypothetical
protein Y32H12A.4 protein.
Length = 193
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 103 EETSQLKAGHPPAVKAGGMRITQHKTP-HSKDSKEPANEDLTGLSGPSP 246
+E + L HP G M+I + KTP H D + +E + G+ P
Sbjct: 55 DEMNILATYHPTDKDYGSMKIDEPKTPYHHSDGESECDEGVLGVPTTRP 103
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical protein
F35A5.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 6.5
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +1
Query: 181 PHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINL 360
P +D EPA +S P P P+ AP K +AA VA P P +
Sbjct: 988 PPWEDDDEPAEP----VSAPEPEKKTPVLAKKAPAKPRDPSPKKAAPVAAKPDPKIP-EV 1042
Query: 361 RPSPNIQQPRK 393
P+P ++ P K
Sbjct: 1043 PPTP-VKNPVK 1052
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +1
Query: 175 KTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHI 354
+TP + S PA + L+ P+P P TP + +PK PA +
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPK---------TPKTPKTPRTPRTPKTPRTPKTPAVV 493
Query: 355 NLRPSPNIQQP 387
P P ++P
Sbjct: 494 EPEPEPVAEEP 504
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +1
Query: 175 KTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHI 354
+TP + S PA + L+ P+P P TP + +PK PA +
Sbjct: 393 ETPATPRSSVPATPTESNLTTPAPK---------TPKTPKTPRTPRTPKTPRTPKTPAVV 443
Query: 355 NLRPSPNIQQP 387
P P ++P
Sbjct: 444 EPEPEPVAEEP 454
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +1
Query: 175 KTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHI 354
+TP + S PA + L+ P+P P TP + +PK PA +
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPK---------TPKTPKTPRTPRTPKTPRTPKTPAVV 493
Query: 355 NLRPSPNIQQP 387
P P ++P
Sbjct: 494 EPEPEPVAEEP 504
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/71 (25%), Positives = 28/71 (39%)
Frame = +1
Query: 175 KTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHI 354
+TP + S PA + L+ P+P P TP + +PK PA +
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPK---------TPKTPKTPRTPRTPKTPRTPKTPAVV 493
Query: 355 NLRPSPNIQQP 387
P P ++P
Sbjct: 494 EPEPEPVAEEP 504
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = +1
Query: 133 PPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPE 312
P +KA + + + + +P D T + P P+P+N S+ G P+ + P
Sbjct: 664 PATLKAMDLFFASYASNLAALRPQPTTSDPTA-AAPVPIPNNKGSLNGNPSPSSPPLLPP 722
Query: 313 AAQVAHSPKP 342
A + P
Sbjct: 723 VASSTPAATP 732
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 205 PANEDLTGLSGPSPVPSNPISI 270
P+ + L GL GP+P S PISI
Sbjct: 597 PSLQQLEGLDGPAPGSSAPISI 618
>AF067947-6|AAO25992.1| 255|Caenorhabditis elegans Hypothetical
protein T10B5.10 protein.
Length = 255
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +1
Query: 199 KEPANEDLTGLSGPSPVPSNPISIA----GAPNKGNADFTPEAAQVAHSPKPPA 348
K+P + L LS PSP NP + A GA + A +A+Q A+S P+
Sbjct: 38 KQPEDLLLKALSQPSPFSFNPFATAEIKLGAQDDFLAALIQQASQYANSSTSPS 91
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 515 AMVKHSNNYTIF*YFEFYDCL 453
A VK++N YTIF Y+EF L
Sbjct: 1144 AFVKNNNCYTIFTYYEFLQFL 1164
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Frame = +1
Query: 157 MRITQHKTPHSKDSKEPANEDLT--------GLSGPSPVPSN--PISIA-GAPNKGNADF 303
++I + +TP + P++ +T +S PSP P++ P++I AP K A +
Sbjct: 385 VQIHETETPSAPSPASPSSVSVTIPRVALPASVSVPSPSPASNVPVTITLSAPAKSPATY 444
Query: 304 --TPEAAQVAHSPKPPAHINLRPSPNIQQPRK 393
PE ++ A P PA + S QP++
Sbjct: 445 GPAPEPSRPAVPPVAPAPSVIPTSSQPSQPKQ 476
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,466,014
Number of Sequences: 27780
Number of extensions: 304103
Number of successful extensions: 1026
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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