Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c13
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23540.1 68414.m02960 protein kinase family protein contains ... 33 0.21
At4g16845.2 68417.m02544 vernalization 2 protein (VRN2) identica... 32 0.37
At4g16845.1 68417.m02543 vernalization 2 protein (VRN2) identica... 32 0.37
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.49
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 31 0.49
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 31 0.65
At1g49270.1 68414.m05524 protein kinase family protein contains ... 31 0.65
At1g30750.1 68414.m03758 expressed protein 31 0.65
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 30 1.1
At1g10620.1 68414.m01204 protein kinase family protein contains ... 30 1.5
At4g34440.1 68417.m04894 protein kinase family protein contains ... 29 2.0
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 29 2.0
At2g18470.1 68415.m02151 protein kinase family protein contains ... 29 2.0
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 2.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 2.6
At1g16860.1 68414.m02035 merozoite surface protein-related conta... 29 3.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 6.0
At2g29525.1 68415.m03586 expressed protein 28 6.0
At2g17110.1 68415.m01974 expressed protein 28 6.0
At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related c... 28 6.0
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 28 6.0
At1g08840.1 68414.m00984 DNA replication helicase, putative simi... 28 6.0
At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative / aceta... 27 7.9
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 27 7.9
At1g48095.1 68414.m05366 hypothetical protein 27 7.9
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 27 7.9
At1g26150.1 68414.m03192 protein kinase family protein similar t... 27 7.9
At1g03340.1 68414.m00313 expressed protein similar to hypothetic... 27 7.9
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +1
Query: 94 SSTEETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGP--SPVPSNPIS 267
+++ S L +PP ++ G + P++ S P T SGP SP ++P
Sbjct: 164 TNSPPASPLDPTNPPPIQPSGPATSPPANPNAPPSPFPTVPPKTPSSGPVVSPSLTSPSK 223
Query: 268 IAGAPNKGNAD 300
PN+GN D
Sbjct: 224 GTPTPNQGNGD 234
>At4g16845.2 68417.m02544 vernalization 2 protein (VRN2) identical
to vernalization 2 protein [Arabidopsis thaliana]
gi|16945788|gb|AAL32135
Length = 380
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 177 NSSLKRQQRTSQ*RLDWSLWAFSRSVQSDLHCWSS 281
NS +++Q+ + + W+ FSR + +LHC+SS
Sbjct: 264 NSFVRKQRVIADGHISWACEVFSRFYEKELHCYSS 298
>At4g16845.1 68417.m02543 vernalization 2 protein (VRN2) identical
to vernalization 2 protein [Arabidopsis thaliana]
gi|16945788|gb|AAL32135
Length = 440
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 177 NSSLKRQQRTSQ*RLDWSLWAFSRSVQSDLHCWSS 281
NS +++Q+ + + W+ FSR + +LHC+SS
Sbjct: 324 NSFVRKQRVIADGHISWACEVFSRFYEKELHCYSS 358
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 202 EPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTP--EAAQVAHSPKPPAHINLRPSPN 375
EP+ T + PSPVPS P+ P + P ++ PPA +N P P
Sbjct: 471 EPSPVLATPVDKPSPVPSRPVQKPQPPKESPQPDDPYDQSPVTKRRSPPPAPVNSPPPPV 530
Query: 376 IQQP 387
P
Sbjct: 531 YSPP 534
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 31.5 bits (68), Expect = 0.49
Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Frame = +1
Query: 163 ITQHKTPHSKDSKEPANEDLTGLSGPSPVPS--NPISIAGAPNKGNADFTPEAAQVAHSP 336
+T P S + P + S P+P S NP PN + P + + +P
Sbjct: 126 VTVPNPPESSSNPNPPDSSSNPNSNPNPPESSSNPNPPVTVPNPPESSSNPNPPESSSNP 185
Query: 337 KPPAHINLRPSPNIQQP 387
PP I P + P
Sbjct: 186 NPPITIPYPPESSSPNP 202
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 31.1 bits (67), Expect = 0.65
Identities = 21/89 (23%), Positives = 34/89 (38%)
Frame = +1
Query: 106 ETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPN 285
E AG PP+ R + T + + P + T +G + + P P
Sbjct: 95 ENRAATAGQPPSPSPDNHRHHRRTTTAAVAGQPPHHRRTTAAAGTTTIAGQPPPPESPPP 154
Query: 286 KGNADFTPEAAQVAHSPKPPAHINLRPSP 372
+ +PE+ SP+PP +L P P
Sbjct: 155 ESLPPPSPESPS-PPSPEPPPPSSLEPPP 182
>At1g49270.1 68414.m05524 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 699
Score = 31.1 bits (67), Expect = 0.65
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 232 SGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPSPNIQQ 384
S P+P P +P S + ++ P Q SP PP+ ++ P P QQ
Sbjct: 10 SPPAPPPPSPPSPPSSNDQQTTSPPPSDNQETTSPPPPSSPDIAPPPQQQQ 60
>At1g30750.1 68414.m03758 expressed protein
Length = 212
Score = 31.1 bits (67), Expect = 0.65
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 88 IMSSTEETSQLKAGHPPAVKAGGMRITQHKTPHSK-DSKEPANEDLTGLSGP 240
++SS E +Q+ P GG+ + Q++ + S P N+ LTGLS P
Sbjct: 20 LVSSISEAAQVTKITTPLEPTGGVSVNQNQPILGQPSSSSPVNQPLTGLSQP 71
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 30.3 bits (65), Expect = 1.1
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Frame = +1
Query: 133 PPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKG-NADFTP 309
PPA K T K+P S S P T PSP P+ P AP K + P
Sbjct: 92 PPAPKKSPPPPTPKKSP-SPPSLTPFVPHPTPKKSPSPPPT-PSLPPPAPKKSPSTPSLP 149
Query: 310 EAAQVAHSPKPPAHINLRPS--PNIQQ 384
P PP+H + PS P+ QQ
Sbjct: 150 PPTPKKSPPPPPSHHSSSPSNPPHHQQ 176
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 106 ETSQLKAGHPPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPN 285
ET+Q A PP+ + TQ P + ++ P N+ P+P S P SI P+
Sbjct: 39 ETTQPPATSPPSPPSPD---TQTSPPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPS 95
Query: 286 KGNADFTPEAAQVAHSP 336
P++ SP
Sbjct: 96 PPQPQPPPQSTPTGDSP 112
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +1
Query: 166 TQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPP 345
T + TP S + P+NE SP PS SI+ P +A F+P A PP
Sbjct: 14 TSNGTPPSNGTS-PSNESSPPTPPSSPPPS---SISAPPPDISASFSPPPAPPTQETSPP 69
Query: 346 AHINLRPSPNIQQP 387
+ P P + P
Sbjct: 70 TSPSSSP-PVVANP 82
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 238 PSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPSPNIQQP 387
PSP P +P+ + G P + TP SP PP + P P+ P
Sbjct: 219 PSPGPDSPLPLPGPPPSSSP--TPGPDSPLPSPGPPPSPSPTPGPDSPLP 266
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 178 TPHSKDSKEPANEDLTGLSGPSPVPSNPISIAG-APNKGNADFT-PEAAQVAHSPKPPAH 351
T + P+N + T S P+P P +P G + + D T P A Q +P PP
Sbjct: 11 TNSTSSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSSSSPPPDSTSPPAPQ---APNPPNS 67
Query: 352 INLRPSPNIQ 381
N PSP Q
Sbjct: 68 SNNSPSPPSQ 77
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 7/74 (9%)
Frame = +1
Query: 187 SKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKG---NADFTPEAAQVAHSPKPPA--- 348
SKD + T PSPVP+ P+ P + N + + SP PP
Sbjct: 381 SKDKCAGGSSQATPSKSPSPVPTRPVHKPQPPKESPQPNDPYNQSPVKFRRSPPPPQQPH 440
Query: 349 -HINLRPSPNIQQP 387
H+ P P P
Sbjct: 441 HHVVHSPPPASSPP 454
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/70 (21%), Positives = 27/70 (38%)
Frame = +1
Query: 181 PHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINL 360
P+ ++ +P E+ PSP P P P + + + + PKP
Sbjct: 427 PNLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPK 486
Query: 361 RPSPNIQQPR 390
+ SP + P+
Sbjct: 487 QESPKQEAPK 496
>At1g16860.1 68414.m02035 merozoite surface protein-related contains
weak similarity to merozoite surface protein [Plasmodium
falciparum] gi|12043655|gb|AAG47601
Length = 474
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 223 TGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSP 336
TGL P+ S P++ +GAP K + +H P
Sbjct: 146 TGLITSGPITSGPLNSSGAPRKVSGPLDSSGLMKSHMP 183
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +1
Query: 238 PSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPSPNIQQ 384
P P P + S P+ + P A V HSP PP + P P I Q
Sbjct: 682 PPPSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPPMVHHSPPPPVIHQ 730
>At2g29525.1 68415.m03586 expressed protein
Length = 289
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 193 DSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNAD 300
DSK P + + SGPSP P P+S + NK D
Sbjct: 242 DSKLPEMAERS--SGPSPTPLLPLSTKDSKNKSKED 275
>At2g17110.1 68415.m01974 expressed protein
Length = 733
Score = 27.9 bits (59), Expect = 6.0
Identities = 9/34 (26%), Positives = 23/34 (67%)
Frame = +1
Query: 361 RPSPNIQQPRK*NAAHLITKRLIHNNGIENVRQS 462
RPS ++++ + H++ K+++ ++G + VR+S
Sbjct: 263 RPSVSVEKEEMEHEVHIVEKKIVEDSGGDEVRKS 296
>At1g78880.1 68414.m09195 balbiani ring 1-related / BR1-related
contains weak similarity to BR1 [Chironomus tentans]
gi|7042|emb|CAA45607
Length = 468
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 223 TGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHSP 336
TGL P+ S P++ +GAP K + + H P
Sbjct: 140 TGLITSGPITSGPLNSSGAPRKISGPLDYSGSMKTHMP 177
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 238 PSPVPSNPISIAGAPNKGNADFTPEAAQVAHSPKPPAHINLRPSP 372
P P P NP+ IAG + A + P+ + P +++ PSP
Sbjct: 29 PCPYPCNPLPIAGTGSTQPAGYYPQPTGY-YPPPSSSNVPNYPSP 72
>At1g08840.1 68414.m00984 DNA replication helicase, putative similar
to helicase [Xenopus laevis] gi|18845092|gb|AAL79550
Length = 1296
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = +1
Query: 178 TPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADF-TPEAAQVAHSPKP 342
+P K SK PA + +P P I + GN+ F TP + H+ P
Sbjct: 173 SPSKKASKRPAFATNRVMERVNPSPDAEFEIVNTSSSGNSPFQTPPSLSCPHNKLP 228
>At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative /
acetate-CoA ligase, putative similar to SP|P27550
(Escherichia coli) and gi:8439651 (Homo sapiens);
contains Pfam AMP-binding enzyme domain PF00501
Length = 693
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 336 RTVGHLSCFWSEVCITFVWSSSNGDRIGRNGRRPRETSQVFIGWF 202
R++ + FWS++ F W GD++ R+ + I WF
Sbjct: 66 RSMDDPAAFWSDIASEFYWKQKWGDQVFSENLDVRK-GPISIEWF 109
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 27.5 bits (58), Expect = 7.9
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +1
Query: 175 KTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAP-NKGNAD--FTP 309
K+P + ++K + LTG+ P S SI G P G D FTP
Sbjct: 842 KSPDTSNAKTMRRQSLTGVMPPGQERSRRSSIGGKPIENGKKDHVFTP 889
>At1g48095.1 68414.m05366 hypothetical protein
Length = 303
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +1
Query: 163 ITQHKTPHSKDSKEP---ANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPEAAQVAHS 333
I+Q P S S EP A + + L P P+P N S + + KG E + +
Sbjct: 140 ISQPLPPASLASHEPHLVAGSEASRLVNPRPIPQNHFSSSSSDFKGKGKAKMEIGECSKR 199
Query: 334 PKPPAHINLRPSPNIQQPRK 393
K ++ N++Q RK
Sbjct: 200 KKDKQVVD-DALRNVRQCRK 218
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/85 (25%), Positives = 29/85 (34%), Gaps = 6/85 (7%)
Frame = +1
Query: 133 PPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPSPVPSNPISIAGAPNKGNADFTPE 312
PP G + P P P P P P S +G+ G P
Sbjct: 623 PPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPPPPPPPPTSHSGSIRVGPPSTPPP 682
Query: 313 A------AQVAHSPKPPAHINLRPS 369
A ++++PKPPA L PS
Sbjct: 683 PPPPPPKANISNAPKPPAPPPLPPS 707
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Frame = +1
Query: 133 PPAVKAGGMRITQHKTPHSKDSKEPANEDLTGLSGPS---PVPSNPISIAGAPNKGNADF 303
PP + P ++ P +T S P+ P P +P S+ N
Sbjct: 109 PPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPSLPAPDPPSNPLP 168
Query: 304 TPEAAQVAHSPKPPAHINLRPSPNIQQP 387
P+ +HS PP H+ P+ I P
Sbjct: 169 PPKLVPPSHS--PPRHLPSPPASEIPPP 194
>At1g03340.1 68414.m00313 expressed protein similar to hypothetical
protein GB:AAC79114
Length = 385
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 307 PEAAQVAHSPKPPAHINLRPSPNIQQPR 390
PE A PK P L+PSP Q P+
Sbjct: 212 PEDAVTLAPPKSPKKTRLKPSPKKQNPK 239
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,556,744
Number of Sequences: 28952
Number of extensions: 285784
Number of successful extensions: 1040
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1028
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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