Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c08
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   6.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.6  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 68 LLMIMYLRFVYKTYINHIY 12
          + ++ YL + YKT   HIY
Sbjct: 13 VFLLFYLFYCYKTIKQHIY 31


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 68 LLMIMYLRFVYKTYINHIY 12
          + ++ YL + YKT   HIY
Sbjct: 13 VFLLFYLFYCYKTIKQHIY 31


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +3

Query: 141 DTAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKS 320
           D A ++  + + E  +K DKP   +  E      +  DKKK++   +K  E+E   K K 
Sbjct: 226 DEAEEEKKEEEGEDKDK-DKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKTKP 284

Query: 321 I 323
           I
Sbjct: 285 I 285


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 487 FISFSTSTT-PILDFNWPVSVSSWSK*NFNL 398
           F SF TS     +   WP+ ++ W+K   NL
Sbjct: 100 FHSFMTSVLFSQVASRWPLFLNEWTKIEINL 130


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/54 (24%), Positives = 23/54 (42%)
 Frame = +3

Query: 444 LKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGSQ 605
           L SK    ++E+  +        E++H      +   Q+K   +  R KTK +Q
Sbjct: 46  LFSKAQTYELERRFRQQRYLSAPEREHLASIIRLTPTQVKIWFQNHRYKTKRAQ 99


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 232 RQYFNCLIKRNKNSMPKKMQRKK 300
           + YFNCL++R   S P   + KK
Sbjct: 44  KNYFNCLMERGTCS-PDGEELKK 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,233
Number of Sequences: 336
Number of extensions: 3049
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)