Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c08
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr 1|||M... 31 0.18
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 30 0.24
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 30 0.32
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 29 0.56
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 29 0.74
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.74
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 1.7
SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyc... 27 2.3
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 27 2.3
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.3
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 3.0
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 27 3.0
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 3.0
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 27 3.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 4.0
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 4.0
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 26 5.2
SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyc... 26 5.2
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 25 6.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 6.9
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 25 6.9
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 25 6.9
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 25 9.1
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 25 9.1
SPAC1782.03 |||microfibrillar-associated protein family protein|... 25 9.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 25 9.1
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 25 9.1
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 25 9.1
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 25 9.1
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 25 9.1
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 25 9.1
>SPAC13G6.09 |||zf-MYND type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAE--EEIQKKLKSIKLDSQ 338
I+ + T + +L D + E+DA+ E +EI +KLK++K+D++
Sbjct: 102 IDFQLITSKVTKLIDSSEIEVDAEPKEENKKEIPEKLKNVKVDTE 146
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 30.3 bits (65), Expect = 0.24
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +3
Query: 213 EKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQF--EDFFSDMNWTQSL-- 380
EK ET K L F K++L++Q E+ KKL++ + + ++ +N + S
Sbjct: 1258 EKIETLKTDLANFRLNKEQLESQLQTEKAAVKKLENSNEEYKRHNQEILLSLNSSTSTSS 1317
Query: 381 ----IKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKE 482
+KN+ + ++L+ E G LKS++ V + E
Sbjct: 1318 DASRLKNELVSKENLIEELNQEIGHLKSELETVKSKSE 1355
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.32
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 195 DKPYFIEKEETTKAILQLFDKKKQELD-AQKDAEEEIQKKLKSIKLDSQFEDF 350
D+P +IE+EE L D +++EL+ + ++ +EE KL SQ +DF
Sbjct: 64 DQPSYIEEEEDPDLEAYLSDLEREELEHSLEELDEENNYKLHLRYSFSQLQDF 116
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.56
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 222 ETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI-KLDSQFEDFFSD 359
E + ++ F ++K+EL++ D+E E K S+ K++ + E+F D
Sbjct: 59 ECEPSCVEYFRQRKEELESHVDSEIETSKDESSVNKVEEKVEEFKED 105
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 28.7 bits (61), Expect = 0.74
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 570 RKREREKTKGSQWFNLPAPEVT 635
+K+ + T GS WF++PA E+T
Sbjct: 103 KKKNIKDTAGSNWFDMPATELT 124
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.7 bits (61), Expect = 0.74
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 165 QLKD-ELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIK--LDS 335
++KD E E++ + K L DKK QEL+ ++ +E +K +S + L S
Sbjct: 456 KIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQS 515
Query: 336 QFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLE 515
D ++ + +++ N+LK + + L S++ + EKE + E
Sbjct: 516 LQRDILNEKK-KHEVYESQLNELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNELSE 574
Query: 516 KQHSL 530
++SL
Sbjct: 575 SKNSL 579
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +3
Query: 162 LQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD 332
LQL+ FE+ + E + +L+L + K + Q+D + ++K ++++K D
Sbjct: 642 LQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV-DSLEKNIQTLKED 697
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 1.7
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +3
Query: 153 DDDLQLKDELFEKNDKPYFIEKEETTKAI-LQLFDKKKQELDAQKDAE-EEIQKKL-KSI 323
+D L L ++L + ++K + K+ + + ++ D+ K+E DA+KD ++ + L ++
Sbjct: 4081 EDHLDLPEDL-KLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENN 4139
Query: 324 KLDSQF-EDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETG 440
LD +D FSD+ + G + ++ TE G
Sbjct: 4140 TLDEDIQQDDFSDLAEDDEKMNEDGFEENVQENEESTEDG 4179
>SPAC25B8.18 |||mitochondrial electron carrier |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 121
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 225 TTKAILQLFDKKKQELDAQKDAE 293
TTK IL LF KK+Q L QK E
Sbjct: 5 TTKRILTLFTKKRQTLVEQKLTE 27
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.1 bits (57), Expect = 2.3
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 159 DLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQ 338
D++ K + N + + + +K I QL + + Q E+ ++K K+ + +
Sbjct: 2 DVKSKHGHIKSNPEESLLFRNSVSKNIAQLSSINYADRNVQAALEQLSERKFKNEREARK 61
Query: 339 FEDF--FSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTS 494
F FSD+ WT I + ++L + ++ ++K+ I E KT+
Sbjct: 62 QLPFEVFSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNSIDSYKNEWSKKTN 115
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 255 KKKQELDAQKDAEEEIQKKLKSIKLDSQF 341
K+K L+A D+E+E +KKLK +L + F
Sbjct: 2 KRKAVLEAFSDSEDEDEKKLKGPQLITGF 30
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +3
Query: 165 QLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFE 344
+L +E ++ I EET + + ++ DA+K EE++ K+ D E
Sbjct: 824 ELNEEFATSSEVDNKISIEETKLKFMNVNSYVMEQYDARKKEIEELESKMSD--FDQSVE 881
Query: 345 DFFSDMN 365
+ +MN
Sbjct: 882 ELQDEMN 888
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 201 PYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQK---KLKSIKLDSQFED 347
PY E EE K + + + +Q++ +E++QK + ++ K+ SQF D
Sbjct: 81 PYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFAD 132
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 258 KKQELDAQKDAEEEIQKKLKSIKLDSQF 341
KK E+ ++ + E + KLK+ +LDS F
Sbjct: 208 KKDEVSSESGSNEIVNAKLKNEQLDSNF 235
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 152 TSGVDYKIHYNIYYSSVHSYGTFENI 75
T GV Y +HYN Y + + T +NI
Sbjct: 47 TRGVVYYVHYNDYNKRLDEWITIDNI 72
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 DKKKQELDAQKDAEEEIQK-KLKSIKLDSQFED 347
+KK+QEL+ QK E++ QK + K +K Q D
Sbjct: 651 EKKQQELERQKREEKQKQKEREKKLKKQQQEAD 683
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 26.2 bits (55), Expect = 4.0
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 168 LKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQ 338
L++++ ++K F+ E+ ++I + K+ E+ D ++KKL SIK D Q
Sbjct: 907 LENQVTIADEKYEFLYAEK--QSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQ 961
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 270 VLVSFYQTVEVLPLWFLLFL*NKVYHFFQ 184
VL Y + V+ L FL F NK+YH F+
Sbjct: 732 VLQRRYASNPVVDLGFLTFEANKLYHLFE 760
>SPCC338.06c |||heat shock protein Hsp20 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 139
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 468 DVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKG 599
+ E ++ V PG++KQ+ H +K + RK+ E+ G
Sbjct: 40 ETEDTIEVDVEVPGIDKQNLKVDLHGSKLTISGERKKPEEEKAG 83
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 6.9
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Frame = +3
Query: 153 DDDLQLKDELFEKN-----DKPYF-----IEKEETTKAILQLFD-KKKQELDAQKDAEEE 299
D D+Q + FEKN D P F +EKE +++ KKQ + +K +EE
Sbjct: 255 DRDVQCIVQYFEKNYQYKGDVPNFEDISKMEKENNLDIMIEASGFNKKQSKELEKYRQEE 314
Query: 300 IQKKLKSIKLDSQFED 347
++K L +E+
Sbjct: 315 EKRKENGDDLSDNYEE 330
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 6.9
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 144 TAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 323
+A DD Q + FE+ D+P EE + + +L ++++++ K E IQ K+I
Sbjct: 580 SAALDDQQTTEAPFEEPDEPAHEPTEEEQEEMRKL----EEKIESTKYGLETIQTSGKTI 635
Query: 324 K 326
K
Sbjct: 636 K 636
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +3
Query: 186 EKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAE 293
E N F++ + T+K ILQL ++K+ELD +++ +
Sbjct: 39 ESNTGNGFLDAK-TSKKILQLAREQKEELDEEENGK 73
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 6.9
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 168 LKDELFEKN--DKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 323
L++ L + N DK +KE KA+ + + A KD E QK+L+S+
Sbjct: 547 LRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESV 600
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 168 LKDELFEKN--DKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 323
L++ L + N DK +KE KA+ + + A KD E+ QK+L+ +
Sbjct: 547 LRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGV 600
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 255 KKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSD 359
+ K+E + ++EE+ + L K + Q ED FSD
Sbjct: 35 RTKEEGYYESESEEDEDQILNKEKKEGQSEDMFSD 69
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 165 QLKDELFEKNDKPYFIEKEETTKAILQ--LFDKKKQELDAQKDAEEEIQKKLKS 320
+L+ L +K DK +E E AI + L + +++E KDAE + K KS
Sbjct: 198 KLRHLLRKKRDKEKSLELEREKMAIEERRLMNSEEREAQDLKDAEASRRGKKKS 251
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.0 bits (52), Expect = 9.1
Identities = 25/134 (18%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 222 ETTKAILQLFDKKKQELDAQ-KDAEEEIQKKLKSIK--LDSQFEDFFSDMNWTQSLIKNK 392
E + +L +D + + L+ + A +Q+++ ++S + N ++L K
Sbjct: 429 EQSNVLLNQYDARVRTLENELSQAGVNLQEQIHQNDDLIESLKNQILTWKNKYEALAKLY 488
Query: 393 GNKLKFHFDQLDT-ETGQLKSKIG--VVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLK 563
+ H D L + QLK+ +D +++M+ + LE + + +H+L+
Sbjct: 489 TQLRQEHLDLLSKYKQIQLKASSAQEAIDKKEKMEREMKNKNLELADMILERDRARHELE 548
Query: 564 AMRKREREKTKGSQ 605
M + +R+K + ++
Sbjct: 549 TMHRSQRDKQESTE 562
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 207 FIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 323
F+E+E +L++ + +A KD ++++K LKS+
Sbjct: 548 FLEQETIPSDLLKVRKDLLDDSNAAKDTMDKVKKHLKSL 586
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 186 EKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFE 344
EK++KP E + K ++ + K E + +++ + +KK +KL+S+ E
Sbjct: 131 EKSEKPL----ETSQKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKEE 179
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/44 (25%), Positives = 25/44 (56%)
Frame = +3
Query: 228 TKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSD 359
T+ + Q+ + QELD+++ E +K+ +S+ + + F+D
Sbjct: 452 TEQLKQIKRELGQELDSKEALVTEFKKRTESLSMPDHVKKVFND 495
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 25.0 bits (52), Expect = 9.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 171 KDELFEKNDKPYFIEKEETTKAILQLFDKKKQEL--DAQKDAEEEIQKKLKS 320
+DE+ E+N+ Y E+ + + D+ K EL D DA+E ++ L S
Sbjct: 53 EDEIDEENEDTYETAAEKRLRLAREYLDEVKNELVEDGGFDAKEVDRELLAS 104
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 25.0 bits (52), Expect = 9.1
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +3
Query: 159 DLQLKDELFEKND---KPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKL 329
++ + + L EK + Y + T+ + QL+ +KKQ L+ Q K + +
Sbjct: 477 EIDILNNLIEKEEGELTKYQTLVKSKTEILTQLYTRKKQLLEQQGKGNVACLPKESDLSM 536
Query: 330 DSQFE-DFFSDMNWTQSLIKNKGN 398
DS E +D N +Q L N
Sbjct: 537 DSITEVSAQADENSSQILSSKTSN 560
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,349,723
Number of Sequences: 5004
Number of extensions: 46950
Number of successful extensions: 238
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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