Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c08
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   1.5  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   8.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   8.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   8.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 513 EKQHSLPKYHVNKHQLKAMRKRE-REKTKGSQWFNLPAPE 629
           E +  + +     H+   ++++E +EKTK + +F  PAPE
Sbjct: 857 EDRRRMEEMRRKAHEEMLLKRQEYKEKTKNALFFAEPAPE 896


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = +3

Query: 447 KSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGSQWF 611
           +SK+ + +  K++   ++   L    S+PK  +N      +R    E++   Q F
Sbjct: 28  RSKVVIPEAMKQLYAQIMGHDLVDSVSVPKEGLNTRNANTVRSFTHEESHIDQRF 82


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +2

Query: 35  CKQIVDTLSLINHIYFQMSRTSAR*NNIYYNGFYNRHR 148
           C   +D L  INH+  +   T      +Y    YNR R
Sbjct: 718 CDCNIDWLQKINHVTSRQYPTINDIETVYCKLMYNRER 755


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 513 EKQHSLPKYHVNKHQLKAMR---KREREKTKGSQWFNL 617
           ++ +  P++   + + K  R   KRE ++TK + W+ L
Sbjct: 299 QRAYDTPEFPDKRREYKLARNALKREIKRTKKATWYRL 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,032
Number of Sequences: 2352
Number of extensions: 10299
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)