Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c08
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 37 0.013
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 33 0.16
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 33 0.21
At1g67680.1 68414.m07723 expressed protein 32 0.28
At5g35380.1 68418.m04205 protein kinase family protein contains ... 32 0.37
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 32 0.37
At2g23430.1 68415.m02797 kip-related protein 1 (KRP1) / cyclin-d... 32 0.37
At1g54770.1 68414.m06245 expressed protein 31 0.48
At2g42150.1 68415.m05217 DNA-binding bromodomain-containing prot... 31 0.64
At2g24930.1 68415.m02981 Ulp1 protease family protein contains P... 31 0.64
At5g30495.2 68418.m03660 expressed protein 31 0.85
At5g30495.1 68418.m03659 expressed protein 31 0.85
At5g35670.1 68418.m04261 calmodulin-binding family protein conta... 30 1.1
At2g42320.1 68415.m05238 nucleolar protein gar2-related contains... 30 1.1
At1g72030.1 68414.m08326 GCN5-related N-acetyltransferase (GNAT)... 30 1.1
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 30 1.5
At1g61260.1 68414.m06904 expressed protein contains similarity t... 30 1.5
At2g17440.1 68415.m02012 leucine-rich repeat family protein cont... 29 2.0
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 29 2.6
At4g21790.1 68417.m03152 transmembrane protein-related (TOM1) co... 29 2.6
At3g11450.1 68416.m01396 DNAJ heat shock N-terminal domain-conta... 29 2.6
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 29 3.4
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 29 3.4
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 29 3.4
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 29 3.4
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 29 3.4
At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-contain... 29 3.4
At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-contain... 29 3.4
At3g57910.1 68416.m06455 D111/G-patch domain-containing protein ... 29 3.4
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 29 3.4
At3g28770.1 68416.m03591 expressed protein 29 3.4
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 29 3.4
At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes... 29 3.4
At5g55230.1 68418.m06884 microtubule associated protein (MAP65/A... 28 4.5
At5g25300.1 68418.m03001 F-box family protein PF0064: F-box doma... 28 4.5
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 28 4.5
At3g02930.1 68416.m00288 expressed protein ; expression support... 28 4.5
At2g30960.1 68415.m03776 expressed protein 28 4.5
At3g11590.1 68416.m01416 expressed protein 28 6.0
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 28 6.0
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 6.0
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 27 7.9
At5g23030.1 68418.m02692 senescence-associated family protein si... 27 7.9
At5g22090.1 68418.m02572 expressed protein 27 7.9
At5g03660.1 68418.m00325 expressed protein low similarity to out... 27 7.9
At4g27595.1 68417.m03964 protein transport protein-related low s... 27 7.9
At4g04010.1 68417.m00571 Ulp1 protease family protein contains P... 27 7.9
At3g59800.1 68416.m06673 expressed protein 27 7.9
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 27 7.9
At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein ... 27 7.9
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +3
Query: 90 PVRVHARXXXXXXXXXXDTAGDDDLQLKDELFE--KNDKPYFIEK-EETTKAILQLFDKK 260
P +VH+R +DL+ DE E K DK I+ +E+ K + + +K
Sbjct: 43 PTKVHSRLVKGTELQTQLNQIQEDLKKADEQIELLKKDKAKAIDDLKESEKLVEEANEKL 102
Query: 261 KQELDAQKDAEEEIQ-KKLKSIKLD 332
K+ L AQK AEE + +K ++++L+
Sbjct: 103 KEALAAQKRAEESFEVEKFRAVELE 127
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 33.1 bits (72), Expect = 0.16
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +3
Query: 252 DKKKQELDAQKDAEEEIQKKLKSIK--LDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQL 425
D+ E + D +++ K++ ++ LDS+ E +N + K+ KLK H + +
Sbjct: 383 DQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHENVI 442
Query: 426 DTETGQLKSKIGVVDVEK-EMKTSVLK 503
+ Q+ GV D K E++ ++LK
Sbjct: 443 EEHKRQVLEASGVADTRKVEVEEALLK 469
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/89 (25%), Positives = 47/89 (52%)
Frame = +3
Query: 222 ETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNK 401
E +A L+ DKK QE + + + IQ +L+S + + S+++ ++ + +K +
Sbjct: 353 ERLRAALEASDKKDQEGNVEASSRLRIQAELQS-----ELKIAKSEIDELKARLMDKETE 407
Query: 402 LKFHFDQLDTETGQLKSKIGVVDVEKEMK 488
L+F ++ D + +L +DVE E+K
Sbjct: 408 LQFISEERDNFSMKLMKNQKEIDVEAELK 436
>At1g67680.1 68414.m07723 expressed protein
Length = 664
Score = 32.3 bits (70), Expect = 0.28
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 339 FEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGV--VDVEKEMKTSVLKPGL 512
+E+ + N T +L+ + + ++ ++ QLK G+ VDV+K KT KP
Sbjct: 495 YEEIVKNHNSTDALVGLVTTLARVNVEKAESYEKQLKPLPGLKAVDVDKLEKTYGAKPIE 554
Query: 513 EKQHSLPKYHVNKHQLKAMRKREREKTKGSQWFNLPAP 626
S + V K + K RKR+ + KG N P P
Sbjct: 555 GAAASSSQEEVKKEKAKRKRKRKPKYPKGFDPAN-PGP 591
>At5g35380.1 68418.m04205 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 731
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 477 KEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGS 602
K+ +LK EK+H L + ++K AM +RE+EK++ +
Sbjct: 322 KKAANELLKWKAEKEHKLEEVRLSKEAAMAMAEREKEKSRAA 363
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 31.9 bits (69), Expect = 0.37
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 279 QKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSL---IKNKGNKLKFHFDQLDTETGQLK 449
+KDA+++ + K K + + S ++ D+ QSL + N + L FD +D ++
Sbjct: 79 EKDAQKKKKNKKKEVAVKSDEDEDEQDVRGEQSLVDAVSNLISPLNSRFDTVDNNIKEMS 138
Query: 450 SKIGVVDVEKEMK 488
S++ V+ + E +
Sbjct: 139 SRLEVIGDQVESR 151
>At2g23430.1 68415.m02797 kip-related protein 1 (KRP1) /
cyclin-dependent kinase inhibitor 1 (ICK1) identical to
cyclin-dependent kinase inhibitor (ICK1) [Arabidopsis
thaliana] GI:3550262, GI:2052502
Length = 191
Score = 31.9 bits (69), Expect = 0.37
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 171 KDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKS-IKLDSQFED 347
K+EL K+ + Y E E K L ++ ++ AEEE + KL + + +S+ ED
Sbjct: 96 KEEL-SKSMENYSSEFESAVKESLDCCCSGRKTMEETVTAEEEEKAKLMTEMPTESEIED 154
Query: 348 FFSDMNWTQSLIKNKGNKLKFHFD 419
FF + + +K K K K++FD
Sbjct: 155 FFVE---AEKQLKEKFKK-KYNFD 174
>At1g54770.1 68414.m06245 expressed protein
Length = 189
Score = 31.5 bits (68), Expect = 0.48
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 423 LDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGS 602
LD +TG +SK E S L GL + P+ +NK M +++ + T GS
Sbjct: 22 LDLKTGSTRSKTA------ESSKSELVDGLCLPPNDPR-KINK-----MIRKQLKDTTGS 69
Query: 603 QWFNLPAPEVT 635
WF++PAP +T
Sbjct: 70 NWFDMPAPTMT 80
>At2g42150.1 68415.m05217 DNA-binding bromodomain-containing protein
contains Pfam domains, PF00439: Bromodomain and PF00249:
Myb-like DNA-binding domain
Length = 631
Score = 31.1 bits (67), Expect = 0.64
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 366 WTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQH 524
W + L K + ++L+ +Q D L+SK+ ++ E+EM S +KP E ++
Sbjct: 87 WLEELRKLRVDELRREVEQYDLSISTLQSKVKQLEEEREM--SFIKPDTETEN 137
>At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 926
Score = 31.1 bits (67), Expect = 0.64
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Frame = +3
Query: 255 KKKQELDAQKDAEEEIQKKLK---SIKLD------SQFEDFFSDMNWTQSLIKNKGNKLK 407
+KK++L K+AE++ +KK K +++ D S+ +D D ++ N + L
Sbjct: 317 EKKKKLLKDKEAEKKKEKKKKKEVAVESDEDEDVRSREQDGQGDQQSLVDVVSNLISPLN 376
Query: 408 FHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKRERE 587
FD +DT ++ S++ V+ + E G + K QLKA+ +
Sbjct: 377 SRFDTVDTSIKEMSSRLDVIGCQIESSVEAKFEGRFGSIENDVKQI-KEQLKAIADSKSS 435
Query: 588 KTKGSQWFNLPAPE 629
+ + P P+
Sbjct: 436 SYIRDMFLSKPQPQ 449
>At5g30495.2 68418.m03660 expressed protein
Length = 196
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 423 LDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGS 602
LDT+T SK V+ + + K L LP K + M +++ + T GS
Sbjct: 21 LDTKTCSTSSKR--VESHESSSLWMSKSELVDGLCLPPNDPKK--INKMIRKQIKDTTGS 76
Query: 603 QWFNLPAPEVT 635
WF++PAP +T
Sbjct: 77 NWFDMPAPTMT 87
>At5g30495.1 68418.m03659 expressed protein
Length = 196
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 423 LDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGS 602
LDT+T SK V+ + + K L LP K + M +++ + T GS
Sbjct: 21 LDTKTCSTSSKR--VESHESSSLWMSKSELVDGLCLPPNDPKK--INKMIRKQIKDTTGS 76
Query: 603 QWFNLPAPEVT 635
WF++PAP +T
Sbjct: 77 NWFDMPAPTMT 87
>At5g35670.1 68418.m04261 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 442
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 396 NKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNK--HQLKAM 569
N L HF+ + G + V+ EK S KP + K+ S+P Y + H+L+A
Sbjct: 352 NDLPLHFESISETQGDATT---VLQTEK----SSFKPSISKRKSVPSYKSQRKHHKLQAT 404
Query: 570 RKREREKTK 596
+ +++TK
Sbjct: 405 KSDLQQQTK 413
>At2g42320.1 68415.m05238 nucleolar protein gar2-related contains
weak similarity to Swiss-Prot:P41891 protein gar2
[Schizosaccharomyces pombe]
Length = 669
Score = 30.3 bits (65), Expect = 1.1
Identities = 27/107 (25%), Positives = 51/107 (47%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKN 389
++ + +TK++ + D+K Q+ ++QK E+E K L + + S SD + QS
Sbjct: 10 VQSKRSTKSVRK--DQKLQKTNSQKKTEQEKHKDLDTKEESSNISTVASD-STIQSDPSE 66
Query: 390 KGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSL 530
+ + LD + G + S D +E +S + EK+H+L
Sbjct: 67 SYETVDVRY--LDDDNGVIAS----ADAHQESDSSSVVDKTEKEHNL 107
>At1g72030.1 68414.m08326 GCN5-related N-acetyltransferase (GNAT)
family protein contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 256
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +3
Query: 426 DTETGQLKSKIGVVDVEKEMKTSVLK--PGLEKQHSLPKYHVNKHQ 557
+TET S +GVVDV + ++SVL+ PG+E+ + V+K Q
Sbjct: 139 ETETLSSSSVVGVVDVTAQTESSVLRYFPGVEEYLYVSGLAVSKSQ 184
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 153 DDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD 332
DD + K K +E EE + + KKK++ + +K+ E +KK K K D
Sbjct: 445 DDSSDSPAPVTTKKSKTKEVEGEEAEEKVKSSKKKKKKDKEEEKEEEAGSEKKEKKKKKD 504
Query: 333 SQFE 344
+ E
Sbjct: 505 KKEE 508
>At1g61260.1 68414.m06904 expressed protein contains similarity to
cotton fiber expressed protein 1 [Gossypium hirsutum]
gi|3264828|gb|AAC33276
Length = 344
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSI 323
+E E T + +++K+ +D+ AE+EI+++LKS+
Sbjct: 135 LESEAVTAVVFDDEEEEKKIIDSAATAEDEIEEELKSV 172
>At2g17440.1 68415.m02012 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeats
Length = 526
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/78 (25%), Positives = 44/78 (56%)
Frame = +3
Query: 270 LDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLK 449
+D+++ EEI + +S+ L + +D + + Q++ K N+L+ D+L +T +
Sbjct: 1 MDSKEMVVEEIMRIHRSLPLRPEIDDVETATSLIQNVEKEDRNRLE-AIDKL-VKTSSSE 58
Query: 450 SKIGVVDVEKEMKTSVLK 503
+ + +V KEMK S+++
Sbjct: 59 VPLELFNVFKEMKKSLVR 76
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 29.1 bits (62), Expect = 2.6
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Frame = +3
Query: 147 AGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKS-- 320
+ ++ +D++ + D+ F EKE ++ + D + +ELD + + +E K+ S
Sbjct: 520 SSNESSDCEDKVMDVTDELEFQEKEIEHCSLQEKLDMELKELDKRLEEKEAEMKRFSSGG 579
Query: 321 -IKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEK----EM 485
L +E D+ + ++ + L+ + + + G K+ V+K E
Sbjct: 580 TSVLKQHYEKKVYDLEQEKRALQREIEGLRHNLASIPSGPGDGAQKLKEEYVQKLNTLET 639
Query: 486 KTSVLKPGLEKQHSL 530
+ SVLK + Q L
Sbjct: 640 QVSVLKKKQDAQAQL 654
>At4g21790.1 68417.m03152 transmembrane protein-related (TOM1)
contains some similarity to transmembrane protein TOM3
GI:15425641 from [Arabidopsis thaliana]; identical to
cDNA TOM1 GI:9967414
Length = 291
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 339 IGCLV*CFLTFSVFLPLHLFGHRVL-VSFYQTVEVLPLWFLLFL*NKV 199
I C+V F L L + H VL + +Y VEVLP +LF+ K+
Sbjct: 231 IRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMVVEVLPSALVLFILRKL 278
>At3g11450.1 68416.m01396 DNAJ heat shock N-terminal
domain-containing protein / cell division
protein-related similar to GlsA [Volvox carteri f.
nagariensis] GI:4633129; contains Pfam profiles PF00226
DnaJ domain, PF00249 Myb-like DNA-binding domain
Length = 663
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 156 DDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKK 311
D+ KD K + EK++ A +Q KKKQE DA AEEE ++K
Sbjct: 305 DNAYRKDPRIVKRKEEEKAEKQQKKDAKIQA--KKKQEEDAAIAAEEEKRRK 354
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 ELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD-SQFEDFF 353
E++EK + EE+ K I +L D+++++ + EE++ ++L+ + +
Sbjct: 618 EVYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVTLREELEAIHNGLELERRKLLEVT 677
Query: 354 SDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSV 497
D + +SL KG ++ +L +L +K G KE K+ +
Sbjct: 678 LDRDKLRSLCDEKGTTIQSLMSELRGMEARL-AKSGNTKSSKETKSEL 724
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +3
Query: 177 ELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD-SQFEDFF 353
E++EK + EE+ K I +L D+++++ + EE++ ++L+ + +
Sbjct: 617 EVYEKRLQDLSKAYEESQKKIEKLMDEQQEKNQQEVTLREELEAIHNGLELERRKLLEVT 676
Query: 354 SDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSV 497
D + +SL KG ++ +L +L +K G KE K+ +
Sbjct: 677 LDRDKLRSLCDEKGTTIQSLMSELRGMEARL-AKSGNTKSSKETKSEL 723
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 141 DTAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQEL 272
D DD L+ +D+L +++D+ +++ E + L KKK +L
Sbjct: 204 DAKDDDGLEDEDDLEDEDDERRYLDDHENPYFTMTLNPKKKSQL 247
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNW 368
IEKEE +AI + +K L D + + + ++LDS+ + S ++W
Sbjct: 480 IEKEECVRAIAESSAEKPDTLGDVSDVSDSVDSSAEILQLDSEDRE-SSPVHW 531
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNW 368
IEKEE +AI + +K L D + + + ++LDS+ + S ++W
Sbjct: 480 IEKEECVRAIAESSAEKPDTLGDVSDVSDSVDSSAEILQLDSEDRE-SSPVHW 531
>At5g19390.2 68418.m02311 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 870
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 141 DTAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQL-FDKKKQELDAQKDAEEEIQKKLK 317
D++G+D+L ++ KN+ I KE AILQ +++KQ L ++ + E+ +L+
Sbjct: 566 DSSGEDELAIQRLETTKNELRQRIAKEARGNAILQASLERRKQALHERRLSLEQDVSRLQ 625
>At5g19390.1 68418.m02310 pleckstrin homology (PH) domain-containing
protein / RhoGAP domain-containing protein weak
similarity to rho-GTPase activating protein [Homo
sapiens] GI:14245732; contains Pfam profiles PF00169: PH
domain, PF00620: RhoGAP domain
Length = 822
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 141 DTAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQL-FDKKKQELDAQKDAEEEIQKKLK 317
D++G+D+L ++ KN+ I KE AILQ +++KQ L ++ + E+ +L+
Sbjct: 566 DSSGEDELAIQRLETTKNELRQRIAKEARGNAILQASLERRKQALHERRLSLEQDVSRLQ 625
>At3g57910.1 68416.m06455 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 265
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Frame = +3
Query: 261 KQELDAQKDAEEEIQKKLKSIKLDSQFEDFFS--DMNWTQSLIKNKGNKLKFHFDQLDT- 431
+++ +K +EEI+ + + K+D EDF S W + + K K DQL+
Sbjct: 136 REDPHKEKKKKEEIEAENEKRKVDEMLEDFGSRQKSQWRKKRVLINFRKAKAALDQLENV 195
Query: 432 ----ETGQLKSKIGVVDVEKEMKTSVLKPGLEK 518
E + + G D E+E + + + L++
Sbjct: 196 EVVPEKKNEEDEDGKPDEEEEEEEEITEEDLQE 228
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 28.7 bits (61), Expect = 3.4
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Frame = +3
Query: 141 DTAGDDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKK--QELDAQKDAEEEIQKKL 314
D+ G+DD+ ++E + D EK++ K + DKK+ + +K A EE +K +
Sbjct: 265 DSNGEDDVAPEEENNKSEDTETEDEKDK-AKEKTKSTDKKRLSKRTKKEKPAAEE-EKSI 322
Query: 315 KSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTS 494
K S+ D + T S K K +K ++ T+T + ++K G D + K
Sbjct: 323 KGSAKSSRKSFRQVDKSTTSSSKKQKVDKDDSSKEKGKTQTSKPQAK-GSKDQGQSRKKG 381
Query: 495 VLKPGLEKQH 524
+P ++ H
Sbjct: 382 KKEPTRKELH 391
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 3.4
Identities = 33/142 (23%), Positives = 59/142 (41%)
Frame = +3
Query: 171 KDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDF 350
K E EK K KEE K + DKK++E D+++ ++ +++ + +K + E+
Sbjct: 1012 KKEYEEKKSKT----KEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEET 1067
Query: 351 FSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSL 530
K K +K K H D + + K + + K K K +EK L
Sbjct: 1068 KEKKESENHKSKKKEDK-KEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEK---L 1123
Query: 531 PKYHVNKHQLKAMRKREREKTK 596
+ NK + K++ + K
Sbjct: 1124 EDQNSNKKKEDKNEKKKSQHVK 1145
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 162 LQLK-DELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQ 338
L+LK DE +K ++ I +E KA+ + ++D K A +++KLK +KL++
Sbjct: 994 LELKIDETEKKFEETKKISEERLKKAL-----DAENKIDNLKTAMHNLEEKLKEVKLENN 1048
Query: 339 F 341
F
Sbjct: 1049 F 1049
>At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes
from this gene
Length = 1035
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 522 HSLPK-YHVNKHQLKAMRKREREKTKGSQWF 611
HSL K +N L A RKR RE+TK S +F
Sbjct: 790 HSLNKSLSLNPRVLPATRKRCRERTKSSSYF 820
>At5g55230.1 68418.m06884 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 587
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMN-WTQS--- 377
+E E + K K+E ++KD + ++K + + + +S ED+ D N ++ S
Sbjct: 354 VEPTELLADMDSQISKAKEEAFSRKDILDRVEKWMSACEEESWLEDYNRDQNRYSASRGA 413
Query: 378 -LIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKH 554
L + K + ++ L +K + E M S G+ L +Y + +
Sbjct: 414 HLNLKRAEKARILVSKIPAMVDTLVAKTRAWEEEHSM--SFAYDGVPLLAMLDEYGMLRQ 471
Query: 555 QLKAMRKREREKTK 596
+ + ++R RE+ K
Sbjct: 472 EREEEKRRLREQKK 485
>At5g25300.1 68418.m03001 F-box family protein PF0064: F-box domain;
similar to F-box protein family, AtFBX7 (GI:20197899)
[Arabidopsis thaliana]
Length = 464
Score = 28.3 bits (60), Expect = 4.5
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 237 ILQLFDKKKQELD-AQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFH 413
+ ++ D K EL A D+E + Q KLK L S+F D + +Q I K K+
Sbjct: 310 VSEVIDSKFLELRFADLDSESQQQTKLKFSMLKSEFVDM--NKEDSQIEINEKETKINQE 367
Query: 414 FDQLD 428
DQ D
Sbjct: 368 HDQSD 372
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 28.3 bits (60), Expect = 4.5
Identities = 28/120 (23%), Positives = 49/120 (40%)
Frame = +3
Query: 276 AQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSK 455
AQ+ AEE + K+ + + L + F D S + K + LD QL+ +
Sbjct: 1854 AQQHAEEILSKEQEVMNLKRHIDYLFKDRESCMSELNKKDTDVLATQISLD----QLQER 1909
Query: 456 IGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGSQWFNLPAPEVT 635
+ ++ ++ EM + L K L + H +A R + TK + F L + T
Sbjct: 1910 VQLLSMQNEMLKNDKSNLLRKLAELDR---TVHNAQASNHRVPQTTKDTASFKLADTDYT 1966
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +3
Query: 165 QLKDELFEKND-KPYFIEKEE-TTKAILQLFDKKKQEL-DAQKDAEEEIQKKLKSIKLDS 335
+LK+EL N+ K ++KE+ T ++ +L ++KK+ L + + EEE + K L S
Sbjct: 401 KLKNELETVNEEKTQALKKEQDATSSVQRLLEEKKKILSELESSKEEEEKSKKAMESLAS 460
Query: 336 QFEDFFSDMNWTQSLIKNKGNK 401
+ S+ + + ++G++
Sbjct: 461 ALHEVSSESRELKEKLLSRGDQ 482
>At2g30960.1 68415.m03776 expressed protein
Length = 260
Score = 28.3 bits (60), Expect = 4.5
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Frame = +3
Query: 234 AILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIK-NKGNKLKF 410
+ILQL ++ E + ++ EEE ++KL++ + + + E+ D+ + + N+ N+ F
Sbjct: 25 SILQLQERWLNEKEKKRKEEEERRRKLQA-EEEKKIEE--EDLKKAEEEKRMNRSNRKHF 81
Query: 411 HFDQLDTETGQLKSKIGVVDVEKEMKTSVLKP--GLEKQHSLPKYHVNKHQLKAMRKRER 584
+ + G+ + V+ EK T ++ G + LPK K++ A RKR
Sbjct: 82 GRKKESIDGGEAR----FVEKEKPEVTVAIESGGGEDAADGLPKKKKKKNK-GAWRKRYN 136
Query: 585 EKTKGSQ 605
KT +Q
Sbjct: 137 SKTNKNQ 143
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.9 bits (59), Expect = 6.0
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +3
Query: 243 QLFDKKKQELDAQKDAEEEIQKKLKSIKL-DSQFEDFFSDMNWTQSLIKNKGNKLKFHFD 419
+L + K + A K+ E E + ++ K+ D D D + L K + K+K +
Sbjct: 338 ELAETKSALMKAVKEIENEKRARVMVEKVCDELARDISEDKAEVEEL-KRESFKVK---E 393
Query: 420 QLDTETGQLKSKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTK 596
+++ E L+ + + +MK S K LE++++ N+ Q KR +EKT+
Sbjct: 394 EVEKEREMLQLADALREERVQMKLSEAKHQLEEKNAAVDKLRNQLQTYLKAKRCKEKTR 452
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 409 NFNLFPLFLIRDCVQFISEKKSSNWLSSL 323
N LF L R+C FI KK + WL+ L
Sbjct: 1604 NVQLFNSLLQRECCTFIMGKKVNVWLNEL 1632
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 474 EKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTKGSQ 605
EKE K K EK+ + +K + + ++REREK KG +
Sbjct: 796 EKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKE 839
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 210 IEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQF 341
I ++T K + +++DKK +E+ A+ + E +KK I + + F
Sbjct: 811 IISDDTWKLVDEIWDKKVEEIKAEAVIQIEEEKKKPQILMATHF 854
>At5g23030.1 68418.m02692 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 264
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/95 (25%), Positives = 40/95 (42%)
Frame = -2
Query: 450 ILTGQFQCLVGQSEISIYFLYF**GTVSNSYLKRNPQIGCLV*CFLTFSVFLPLHLFGHR 271
I T L+G + +S + G +NP I F S+ L L+G
Sbjct: 10 ITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGLIAALYGSH 69
Query: 270 VLVSFYQTVEVLPLWFLLFL*NKVYHFFQITHPSA 166
++++ Y L + LL L V+ F +T+P+A
Sbjct: 70 IIITLYLFFLFLSILLLLVL--SVF-IFLVTNPTA 101
>At5g22090.1 68418.m02572 expressed protein
Length = 463
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +3
Query: 186 EKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEE 299
E +++P + +KE+ + +Q FD++++E + ++D EEE
Sbjct: 279 EISNEPNY-DKEDEIDSEVQWFDEEEEEEEEEEDEEEE 315
>At5g03660.1 68418.m00325 expressed protein low similarity to outer
surface protein F [Borrelia burgdorferi] GI:466482;
contains Pfam profile PF04949: Family of unknown
function (DUF662)
Length = 173
Score = 27.5 bits (58), Expect = 7.9
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +3
Query: 153 DDDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLD 332
D +LKD+L E ++KE+ ++ + L A K EEEI+KK I+
Sbjct: 13 DQGRRLKDQLSESMSFSSQMKKEDDELSM--------KALSAFKAKEEEIEKKKMEIRER 64
Query: 333 SQFE-DFFSDMNWTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVE-KEMKTSVLKP 506
Q + D + ++I+ +L+ D + E ++ KI +D E K + +V K
Sbjct: 65 VQAQLGRVEDESKRLAMIR---EELEGFADPMRKEVTMVRKKIDSLDKELKPLGNTVQKK 121
Query: 507 GLEKQHSLPKYH-VNKHQLKAMRK 575
E + +L ++ NK +++ + K
Sbjct: 122 ETEYKDALEAFNEKNKEKVELITK 145
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +3
Query: 204 YFIEKEETTKAILQLFDKKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFS---DMNWTQ 374
Y +EK E + D ++E+D++ + E + + L Q ED S +
Sbjct: 1135 YHLEKREASSERDTEHDFAEEEVDSKAEGSENFDQLSNGLSLAEQTEDVVSKDQQQKKKK 1194
Query: 375 SLIKNKGNKLK 407
L++ GN LK
Sbjct: 1195 PLLRKFGNLLK 1205
>At4g04010.1 68417.m00571 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At1g32840, At2g06430,
At2g15140, At2g04980, At2g14130, At3g44500, At2g15190,
At3g47260, At5g34900, At3g29210, At2g02210, At3g32900
Length = 836
Score = 27.5 bits (58), Expect = 7.9
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Frame = +3
Query: 156 DDLQLKDELFEKNDKPYFIEKEETTKAILQLFDKKKQE---LDAQKDAEEEIQKKLKSIK 326
+DL + EL E+ I EE + +++KQE L+ Q +AEEE + K+
Sbjct: 360 EDLNKRVELIERI---LDIRMEEKNNQRSEEDEERKQEDEGLERQPEAEEEGGLERKAKN 416
Query: 327 LDSQFEDFFSDMNWTQ--SLIKNKGNKLKFHFDQLDTETGQLKS 452
+ FED + N TQ S + + N ++ D++ E+ + KS
Sbjct: 417 DNESFEDSIREPN-TQYGSYLGDDENTQRYVGDEVAEESSKDKS 459
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 27.5 bits (58), Expect = 7.9
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +3
Query: 279 QKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKL---KFHFDQLDTETGQLK 449
QK EEE++K D ++ + ++ +SL +KG K D+ D ++ + K
Sbjct: 60 QKQKEEELKKGELEADTDKLMREYRAQLDAERSLKLSKGRNYSSDKSRKDKKDRDSKKKK 119
Query: 450 SKIGVVDVEKEMKTSVLKPGLEKQHSLPKYHVNKHQLKAMRKREREKTK 596
SK E +S + + S K + + K+ R + K+K
Sbjct: 120 SKKRKHYSSSESSSSSDEDESRRSRSSSKRSKKEKKHKSSRDKHSSKSK 168
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +3
Query: 255 KKKQELDAQKDAEEEIQKKLKSIKLDSQFEDFFSDMNWTQSLIKNKGNKLKFHFDQLDTE 434
KKK++++ +K EEE +K K K +++ E K K K + H ++ TE
Sbjct: 461 KKKKKVEEEKPEEEEPSEKKKKKKAEAETEAVVE----VAKEEKKKNKKKRKHEEEETTE 516
Query: 435 T 437
T
Sbjct: 517 T 517
>At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 371
Score = 27.5 bits (58), Expect = 7.9
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Frame = +3
Query: 300 IQKKLKSIKLDSQFEDFFSDMN-WTQSLIKNKGNKLKFHFDQLDTETGQLKSKIGVVDVE 476
IQ+K + I + S D DM+ W Q ++ K ++Q + + K + VE
Sbjct: 116 IQRKGEKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQ--NKPTDIVCKYFLDAVE 173
Query: 477 KEMKT---SVLKPGLE--KQHSLPKYHVNKHQLKAMRKREREK 590
K+ S G E +H+LP +V K Q+KA+ + E K
Sbjct: 174 KKQYGWFWSCPNGGKECHYRHALPPGYVLKSQMKALLEEESSK 216
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,771,172
Number of Sequences: 28952
Number of extensions: 226562
Number of successful extensions: 1030
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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