Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c07
(598 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 212 4e-56
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 147 9e-37
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 144 7e-36
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 125 4e-30
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 114 1e-26
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 113 2e-26
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 107 2e-24
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 105 6e-24
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 78 9e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 68 9e-13
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 68 9e-13
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 66 4e-12
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 66 5e-12
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 60 3e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 57 2e-09
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 56 4e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 56 5e-09
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 45 1e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 45 1e-05
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 40 3e-04
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 35 0.010
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.68
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 1.6
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.6
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 27 2.1
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 27 2.7
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 2.7
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 4.8
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 26 4.8
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 4.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 8.4
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 8.4
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 212 bits (517), Expect = 4e-56
Identities = 99/120 (82%), Positives = 110/120 (91%)
Frame = +2
Query: 239 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 418
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 419 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
IWDTAGQERYRAITSAYYRGAVGAL+VYDI K S++NV RWL+ELR+HAD NI+IMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 147 bits (357), Expect = 9e-37
Identities = 65/116 (56%), Positives = 86/116 (74%)
Frame = +2
Query: 251 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 430
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 431 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
AGQER+R IT+AYYRGA+G LL+YD+ S++NV W + HA +N+ +L+G
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIG 121
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 144 bits (350), Expect = 7e-36
Identities = 66/117 (56%), Positives = 89/117 (76%)
Frame = +2
Query: 248 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 427
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 428 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
TAGQER+R ITS+YYRGA G ++VYD+ S+ NV++WL+E+ +A + + +LVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 125 bits (302), Expect = 4e-30
Identities = 58/123 (47%), Positives = 82/123 (66%), Gaps = 4/123 (3%)
Frame = +2
Query: 242 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 409
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 410 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIM 589
K QIWDTAGQE++R++ YYRGA GA+LVYD+ S+E + WL ++R A I ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 590 LVG 598
L G
Sbjct: 123 LAG 125
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 114 bits (274), Expect = 1e-26
Identities = 53/112 (47%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWDTAGQE 442
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 443 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
RY+++ YYR A A++VYDI + S E + W++EL+ A + I+I L G
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAG 127
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 113 bits (272), Expect = 2e-26
Identities = 44/112 (39%), Positives = 83/112 (74%)
Frame = +2
Query: 263 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 442
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 443 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
R+R++ +Y R + A++VYDI H S+ N E+W+ ++R +++I+LVG
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVG 123
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 107 bits (256), Expect = 2e-24
Identities = 45/104 (43%), Positives = 73/104 (70%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN 577
++++ A+YRGA ++VY++ S+++VE W +E Q+
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQD 113
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 105 bits (251), Expect = 6e-24
Identities = 42/99 (42%), Positives = 72/99 (72%)
Frame = +2
Query: 257 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 436
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 437 QERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRE 553
QER++++ A+YRGA +LVYD+ S+E ++ W E
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDE 105
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 78.2 bits (184), Expect = 9e-16
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +2
Query: 263 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 442
FK+VL+GD G GK++ + R EF + +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 443 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVG 598
+ + YY ++++D+ ++Y+NV W R+L +NI I+L G
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCG 120
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 70.9 bits (166), Expect = 1e-13
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELR 559
+ + AV L ++D+++ + +++ W R+ R
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQAR 109
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 68.1 bits (159), Expect = 9e-13
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVG 598
Y + Y A L+ + I S ENV +W+ E+ N+ +LVG
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVG 119
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 68.1 bits (159), Expect = 9e-13
Identities = 34/98 (34%), Positives = 56/98 (57%)
Frame = +2
Query: 263 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQE 442
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 443 RYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLREL 556
Y A+ Y R G LLVY+I S++ + + +++
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQI 105
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 66.1 bits (154), Expect = 4e-12
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIML 592
Y + S Y ++ + + S ENV +WL E+ + L+++
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLV 123
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 65.7 bits (153), Expect = 5e-12
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
K+V++GD GK+ LL F++ F T+ + +EVDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVG 598
Y + Y + L+ + + S +NV E+W+ E+ H N+ I+LVG
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVG 117
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 59.7 bits (138), Expect = 3e-10
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
K+V++GD GK+ LL F++ F T+ + +EVDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLV 595
Y + Y + L+ + + S +NV E+W+ E+ H ++ I+LV
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVL-HFCSSLPILLV 116
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 56.8 bits (131), Expect = 2e-09
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
++ ++G VGKSSL ++ N F TI F+ ++I+ G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVG 598
Y + S + G G +LVY I S+E V+ ++ +H + I++VG
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVG 118
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 56.0 bits (129), Expect = 4e-09
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
K V++GD VGK+ LL +T N+F + T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVG 598
Y + Y L+ + + S+ENV E+W E+ H + ++VG
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVG 114
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 55.6 bits (128), Expect = 5e-09
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWDTAGQE 442
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 443 RYRAITSAYYRGAVGALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVG 598
Y + Y + LL + I S NV E+W E++ H I+LVG
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVG 127
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 44.8 bits (101), Expect = 1e-05
Identities = 29/97 (29%), Positives = 45/97 (46%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
+V+L+G GK+++L + N E T G F R++EV+G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVN-EVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKT 72
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLREL 556
R Y+ + V D L E L+EL
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQEL 109
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 44.8 bits (101), Expect = 1e-05
Identities = 26/110 (23%), Positives = 51/110 (46%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLV 595
R + Y+ G G + V D A + L + + ++LV
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLV 127
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 39.9 bits (89), Expect = 3e-04
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 446 YRAITSAYYRGAVGALLVYDI--AKHLS--YENVERWLR--ELRD 562
R + Y++ G + V D + +S +E ++R L ELRD
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRD 118
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 34.7 bits (76), Expect = 0.010
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQER 445
+VV+ GD GVGKSSL+S + E N+ S + + S + + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQ-EDNVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 446 YRAITSAYYRGAVGALLVYDIAKHLSYENVE-RWLRELR 559
R +A + A LVY + + SYE V WL R
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFR 100
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 248 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 373
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.68
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 269 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 400
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 224 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 391
+K G + + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLE 105
Query: 392 VDGKTIK 412
DG I+
Sbjct: 106 YDGAEIQ 112
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -2
Query: 369 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 274
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 589 HDEDVLVGVVAQLAQPSLHVLVRQVLGD 506
HD+++LVG + QP HV+ +L D
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDD 134
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 2.7
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 131 VIFVSNIIFIYGHLDVSKLTDF*RRLQSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 310
+IF + + + V+KL +L S+G + E +YD KVV I SG KSSL
Sbjct: 259 IIFDPDCAYAFPPYPVTKLI----KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 312 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 214
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 263 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 364
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 522 DRCLAMS*TSSAPTAPR*YADVMARYRSW-PAVSHI-*AFMVLPSTSI 385
D LA TS P Y +MAR RSW PA+++ AF + P I
Sbjct: 829 DDGLATVPTSYDPVLVLLYGHIMARNRSWIPAINYYSRAFAINPDCPI 876
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 269 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAG 436
++++G+S +GK++ ++ F + N+ N K T+ ++ + I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 495 SSAPTAPR*YADVMARYRSWPA 430
SS+P P A +AR RSWPA
Sbjct: 146 SSSPLPPMSIAMNIARKRSWPA 167
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 354 DLDSKLNSFLVKRDRRLLLPTPESPMSTTLNK*SYSSSLVPILVYPELCSRR 199
DL+SKL F RD+ L + T LN S+ S + L PE S +
Sbjct: 276 DLESKLYRFEEYRDKVATLELENEKIQTELN--SWKSLITNELPTPEAVSNK 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,142,148
Number of Sequences: 5004
Number of extensions: 39945
Number of successful extensions: 171
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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