Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c06
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 38 0.007
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 35 0.047
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 33 0.11
At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS... 33 0.11
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 33 0.14
At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock pro... 30 1.0
At4g14830.1 68417.m02280 expressed protein 29 2.4
At1g66720.1 68414.m07584 S-adenosyl-L-methionine:carboxyl methyl... 28 4.1
At1g22080.1 68414.m02761 hypothetical protein 28 4.1
At3g49540.1 68416.m05414 expressed protein 28 5.4
At1g76770.1 68414.m08934 heat shock protein-related contains sim... 28 5.4
At1g66880.1 68414.m07601 serine/threonine protein kinase family ... 28 5.4
At4g22590.1 68417.m03259 trehalose-6-phosphate phosphatase, puta... 27 7.2
At2g28680.1 68415.m03486 cupin family protein similar to legumin... 27 7.2
At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein ... 27 9.5
At3g16857.2 68416.m02153 two-component responsive regulator fami... 27 9.5
At3g16857.1 68416.m02152 two-component responsive regulator fami... 27 9.5
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +3
Query: 426 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIA 569
+F R++ LP+ E+V+++L + GVLTI + P+ VKG R V IA
Sbjct: 132 KFWRQFKLPDNVDMESVKAKLEN-GVLTINLTKLSPEKVKGPRVVNIA 178
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +3
Query: 420 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIA 569
S +F RR+ LPE A E +++ + +GVL++T P KVP+ + + I+
Sbjct: 109 SGKFTRRFRLPENAKMEEIKASM-ENGVLSVTVP-KVPEKKPEVKSIDIS 156
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 420 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIA 569
S +F+RR+ LPE A E V++ + +GVLT+ P K P+ + + I+
Sbjct: 111 SGKFMRRFRLPENAKMEEVKATM-ENGVLTVVVP-KAPEKKPQVKSIDIS 158
>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
(HSP17.4-CI) identical to 17.4 kDa class I heat shock
protein SP:P19036 from [Arabidopsis thaliana]
Length = 156
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 420 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIA 569
S +F+RR+ LPE A E V++ + +GVL++T P KV ++ + V I+
Sbjct: 108 SGKFMRRFRLPENAKVEEVKASM-ENGVLSVTVP-KVQESKPEVKSVDIS 155
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 420 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 524
S QF RR+ LPE + V++ + +GVLT+T P+
Sbjct: 105 SGQFTRRFRLPENVKMDQVKAAM-ENGVLTVTVPK 138
>At4g21870.1 68417.m03163 26.5 kDa class P-related heat shock
protein (HSP26.5-P) contains Pfam profile: PF00011
Hsp20/alpha crystallin family: identified in Scharf,
K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 134
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/79 (22%), Positives = 33/79 (41%)
Frame = +3
Query: 294 DKFQVNLDVQHFAPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 473
D ++D+ EEI V+ D ++ + F R++ LPE
Sbjct: 35 DSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKFRLPESIDMIG 94
Query: 474 VESRLSSDGVLTITAPRKV 530
+ + DGVLT+ P+++
Sbjct: 95 ISAGYE-DGVLTVIVPKRI 112
>At4g14830.1 68417.m02280 expressed protein
Length = 152
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 432 VRRYALPEGAAPETVESRLSSDGVLTITAPR 524
V R+ LPE PE V DG L +T P+
Sbjct: 109 VWRFRLPESTRPELVTVDCDGDGELIVTVPK 139
>At1g66720.1 68414.m07584 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
defense-related protein cjs1 [Brassica
carinata][GI:14009292][Mol Plant Pathol (2001)
2(3):159-169]
Length = 352
Score = 28.3 bits (60), Expect = 4.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 430 SSDVTRCLKARRLRLWNRDCHQTGYSPSLRR 522
+S + + + R LWNRD H TG++ +++
Sbjct: 151 TSKIPKGISDRNSPLWNRDMHCTGFNNKVKK 181
>At1g22080.1 68414.m02761 hypothetical protein
Length = 475
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 220 LFSKGPAATLRRSSGVKARPKCWSNRRRGRLEPKSSKKYGSND 92
L + P A L+R + PK RRR R+ SSK + + D
Sbjct: 305 LMDEAPRANLKRKQEQQDEPKRSKKRRRQRVARSSSKLHSNLD 347
>At3g49540.1 68416.m05414 expressed protein
Length = 166
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 453 EGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTGPVRKE 593
E AA E E+++ + + + AP KV AV+ E+K A+ PV+ E
Sbjct: 100 ENAATENAEAKVEA---VAVAAPEKVEVAVEAEKK---AEAEPVKAE 140
>At1g76770.1 68414.m08934 heat shock protein-related contains
similarity to 17.9 kDa heat-shock protein [Helianthus
annuus] gi|11990130|emb|CAB55634
Length = 244
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 423 RQFVRRYALPEGAAPETVESRLSS-DGVLTITAPRKV 530
++F + + +P+ + +++R + DG LT+T P+KV
Sbjct: 93 KEFKKVFRIPDIVILDKIKARFNEEDGTLTVTMPKKV 129
>At1g66880.1 68414.m07601 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 1296
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -1
Query: 226 YSLFSKGPAATLRRSSGVKARPKCWSNRRRGRLEPKSSKKY 104
Y S G A + +ARP CWS R +E S+ +
Sbjct: 1041 YEYISNGTLAEHLHGNRAEARPLCWSTRLNIAIETASALSF 1081
>At4g22590.1 68417.m03259 trehalose-6-phosphate phosphatase,
putative similar to trehalose-6-phosphate phosphatase
(AtTPPA) GI:2944178; contains Pfam profile PF02358:
Trehalose-phosphatase
Length = 377
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 126 SRRPRRLLDQHFGLALTPDDLLSVAAGPLLNREYYRPWRHLAAAARDVGSSIKVDKD 296
S PR+ L + F + + P+D S A L + H+AA A++ ++ +D D
Sbjct: 59 SSPPRKRLVKDFNIEIAPEDDFSQRAWMLKYPSAITSFAHIAAQAKNKKIAVFLDYD 115
>At2g28680.1 68415.m03486 cupin family protein similar to legumin
(11S-globulin) from Ginkgo biloba [GI:949869], 11S
globulin from Avena sativa [GI:472867]; contains a 11-S
plant seed storage protein signature (PS00305)
Length = 356
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 420 SRQFV-RRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERK 557
S +FV R + L E + V S+ + +G++ + A K+P+ KG+RK
Sbjct: 141 STEFVGRAWDLDETTVKKLVGSQ-TGNGIVKVDASLKMPEPKKGDRK 186
>At3g43230.1 68416.m04563 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 485
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 520 RGRCLTPSRERERCP 564
+GRCL PSR RER P
Sbjct: 211 KGRCLMPSRFRERNP 225
>At3g16857.2 68416.m02153 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 690
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 376 WKASTKRRKTSTGIFQGSSSDVTRC-LKARRLRLWNRDCHQ 495
W++S+++RK G QG D LK R+ +W+ + HQ
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDEDASNLKKPRV-VWSVELHQ 248
>At3g16857.1 68416.m02152 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 669
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 376 WKASTKRRKTSTGIFQGSSSDVTRC-LKARRLRLWNRDCHQ 495
W++S+++RK G QG D LK R+ +W+ + HQ
Sbjct: 209 WRSSSRKRKDEEGEEQGDDKDEDASNLKKPRV-VWSVELHQ 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,409,879
Number of Sequences: 28952
Number of extensions: 236721
Number of successful extensions: 631
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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