Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c04
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    26   0.32 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    26   0.32 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.57 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.0  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.2  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 163 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNIS 297
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK + S
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKKNDDS 123


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 11/45 (24%), Positives = 26/45 (57%)
 Frame = +1

Query: 163 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNIS 297
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK + S
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKKNDDS 123


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +1

Query: 163 YNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAKEEEINKK 285
           ++ + HL +Y T  + I    + +I+++ + Q  E +++KK
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSL-QLDENKLDKK 119


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 82  IFRFCFELELKLKY*VYNLWVGLLL 8
           IF  C +   ++ + ++NL++ LLL
Sbjct: 104 IFNCCSKKSFRMNFAIFNLYMVLLL 128


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 522 DNQAETSS*RGKDTEERSGNCSQNGKIRD 608
           DN+  TSS    +T   S N    G ++D
Sbjct: 395 DNRNNTSSRAQGETSRNSKNSGNGGGVQD 423


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 591  FGYNFLISLQYLFL 550
            FG NFLI  Q +FL
Sbjct: 1330 FGLNFLIITQAMFL 1343


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 249 IAVVNNYLFILFNCF 205
           ++ + NY   L+NCF
Sbjct: 135 LSFIENYCQFLYNCF 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,651
Number of Sequences: 336
Number of extensions: 3173
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)