Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c04
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0154 + 15266430-15266953,15267748-15267820,15267893-152679... 35 0.068
12_02_0628 + 21357876-21359921 33 0.28
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 31 0.64
02_04_0393 - 22581651-22582046,22582191-22582196 31 0.64
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 30 1.5
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 30 1.9
05_05_0299 - 23930657-23932627 29 2.6
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 29 3.4
05_01_0399 - 3154179-3154313,3154834-3154926,3155173-3155285,315... 29 3.4
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 29 4.5
01_07_0279 + 42449197-42449310,42449398-42449835 29 4.5
08_01_0397 - 3509186-3510291,3510322-3512335 28 5.9
03_06_0486 - 34261577-34261692,34261830-34262094,34263164-342632... 28 7.8
03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825 28 7.8
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 28 7.8
01_06_1086 - 34421837-34422311,34422426-34422612,34423162-344232... 28 7.8
>10_08_0154 +
15266430-15266953,15267748-15267820,15267893-15267949,
15268248-15268303,15269584-15269797,15270497-15270538,
15270661-15270735,15270820-15270903,15271880-15271944,
15272436-15272655,15272820-15272908,15273326-15273440,
15273519-15273554
Length = 549
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 501 HNTRDDGDNQAETSS*RGKDTEERSGNCSQNGKIRDVEKGTSK 629
H RDDG + +S RGKD E+ G + + ++ EK S+
Sbjct: 72 HRDRDDGKEKERSSRSRGKDAEKDRGKDGEKDRSKEAEKDRSR 114
>12_02_0628 + 21357876-21359921
Length = 681
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +1
Query: 445 PTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKEL 624
PTR D+ EK E +AY F T QK L E++ ++R + A+ +L + EL
Sbjct: 414 PTRQDVLEKKEAIQQAYNFVYS---AHTVQKMLKEKKSAIRRPINVAAEKDRL---RNEL 467
Query: 625 RNKVAKKTAEAQAAK 669
+A++ EA+A +
Sbjct: 468 DMAIARRD-EAEAER 481
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.5 bits (68), Expect = 0.64
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 4/152 (2%)
Frame = +1
Query: 190 YSTTSEAIEQNEQVIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAH 369
+ E +E+ ++ + + KE++INK+ L N K + +A
Sbjct: 254 FKIKQEELEEAKKALEHTKATLKIKEDDINKRLAELHLQEKEAESKNRKLE-EREKKIAE 312
Query: 370 LTVKYN-RKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAYP-FTIQEMMETTRQKR- 540
K + R+ G N L R D +LE E +++ +Q+ + ++++
Sbjct: 313 REEKVSAREKVGLQKLLEDHNVKL-ESKRRDFDLQLENEKKSFDAMLVQKEADLVQREKD 371
Query: 541 -LAEEEKILKRDQEIVAKMAKLEMWKKELRNK 633
+ EEK+ K++Q + KLE W+ +L K
Sbjct: 372 VRSSEEKLSKKEQVLNESKKKLEEWQNDLDTK 403
>02_04_0393 - 22581651-22582046,22582191-22582196
Length = 133
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +1
Query: 232 IIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYNRKMYGKYG 411
+++ SD ++ KEEE KK L HH Y +P + H + YG +G
Sbjct: 68 LVEVSDASKKKEEEAKKKEEKEELVYYHHGY-----GYYHPGGVYH-----HHPGYGPHG 117
Query: 412 SASGVNPS 435
G NPS
Sbjct: 118 CPCGCNPS 125
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 481 ESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMW--KKELRNKVAKKTAE 654
E E +E E RQK + EE+K + D+E+ + +++ W +K L + AK+ +
Sbjct: 3 EEEVVVVVDEEESERRRQKMIEEEKK--RLDEEMELRRRRVKEWQEQKRLEEEEAKRREQ 60
Query: 655 AQAA 666
AA
Sbjct: 61 EAAA 64
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 475 EYESEAYPFTIQEMMETTRQKRLAEEEKIL 564
EY +EAYPFT + + E Q++ A++ + +
Sbjct: 147 EYGTEAYPFTTERINELKEQEKAAKDNQTI 176
>05_05_0299 - 23930657-23932627
Length = 656
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 448 TRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLE-MWKKEL 624
T AD+ +++ S ++++ + +Q+R +EE+I + QE ++ L+ + KKE+
Sbjct: 311 TGADVMDRVMGHSRFVEGSVRKKESSRKQQRKNKEERIARAKQEQAEELKHLKNLKKKEI 370
Query: 625 RNKVAK 642
K+ +
Sbjct: 371 AEKLER 376
>10_01_0030 -
386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 508 QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAK 669
+E++ +Q +L EEE+ KR++E + + + +K+LR K K E + K
Sbjct: 500 KEIITLEKQTKLLEEEEKEKREEEERRERRRTKEREKKLRRKERLKEKEKEKEK 553
>05_01_0399 -
3154179-3154313,3154834-3154926,3155173-3155285,
3155684-3155780
Length = 145
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 541 LAEEEKILKRDQEIVAKMAKL-EMWKKELRNKVAKKTAEAQ 660
+A E+ LK E++ K KL E W+KEL++++ K E +
Sbjct: 103 IAIMEEELKTKSELIDKHKKLIEGWQKELKDQLGKHVTELE 143
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 500 KGYASDSYSNFSLMSALVGQHKLGFTPLALPYF 402
KG+A DSYSN+S + + +GF L +F
Sbjct: 218 KGFALDSYSNYSQLRYSEAVNVIGFVYSVLQFF 250
>01_07_0279 + 42449197-42449310,42449398-42449835
Length = 183
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 388 RKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETTRQKRL 543
R+ YG G G WP ++ EKLE E E + I TTR+ ++
Sbjct: 94 RRAYGDIGGYHGSKGR--WPREPEV-EKLEREKEMLKYGIMSKPTTTRKVKI 142
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +1
Query: 511 EMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAA 666
E E RQK+ EE+K + D+E+ + +++ W++ R + K E + A
Sbjct: 152 EEAERRRQKKKEEEQK--QLDEEMETRRRRIKEWQEMKRREEETKRREQEEA 201
>03_06_0486 -
34261577-34261692,34261830-34262094,34263164-34263277,
34263371-34264795
Length = 639
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 172 SSHLYRYSTTSEAIEQNEQVI--IDDSDVAQAKEEEINKKRNISRLSMSHHNLV 327
S LY+Y T EA+ Q E I + D AQ EE+ R ++ M H L+
Sbjct: 557 SDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEV-LFRAANKAGMDFHELI 609
>03_02_0824 + 11556128-11556989,11557515-11559134,11559236-11559825
Length = 1023
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 271 EINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYN 387
EI K +++ + +S +N NG P D P L V YN
Sbjct: 495 EITKLKHLIYIDLSKNNF-NGTIPEDLPDDLVEFNVSYN 532
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +1
Query: 463 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 642
+++ EY+ E + ++ E Q++ EE+K + + + + ++ K KKE + + K
Sbjct: 338 KQREEYQVEMAAYRQRKQEEAACQEKEEEEQKKIMKQEAL--QLLK----KKEKTDNIIK 391
Query: 643 KTAEAQAAK 669
KT E Q K
Sbjct: 392 KTKEEQRKK 400
>01_06_1086 -
34421837-34422311,34422426-34422612,34423162-34423291,
34423485-34423720,34423804-34423961,34424048-34424128,
34424216-34424281,34424364-34424432,34424722-34424866,
34425645-34426138,34426244-34426811,34429529-34429574
Length = 884
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 214 EQNEQVIIDDSDVAQAKEEEINKKRNISR--LSMSHHNLVNGKRPYDYPMSLAHLTVKYN 387
+QN ++I+ + ++ RN+S L +SH+NL +G PY+ SL L + YN
Sbjct: 410 KQNPRIILVNLSASRLSGWINPSFRNMSLEILDLSHNNL-SGTIPYNQVNSLKSLNLSYN 468
Query: 388 R 390
+
Sbjct: 469 Q 469
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,715,033
Number of Sequences: 37544
Number of extensions: 300071
Number of successful extensions: 905
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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