Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11c04
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08) 34 0.12
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_49663| Best HMM Match : TolA (HMM E-Value=0.059) 32 0.49
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_41501| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 30 1.5
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 30 1.5
SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077) 30 1.5
SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30) 30 2.0
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 30 2.0
SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04) 29 2.6
SB_37184| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032) 29 2.6
SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017) 29 2.6
SB_39183| Best HMM Match : LEA_4 (HMM E-Value=2.7) 29 3.4
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22) 29 3.4
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 3.4
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 29 3.4
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_59247| Best HMM Match : Synaphin (HMM E-Value=0.00036) 29 4.5
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 29 4.5
SB_47879| Best HMM Match : ATP-synt_Eps (HMM E-Value=3.8) 28 6.0
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_55389| Best HMM Match : Las1 (HMM E-Value=0.074) 28 6.0
SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023) 28 6.0
SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 28 6.0
SB_51323| Best HMM Match : LicD (HMM E-Value=0.0088) 28 7.9
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_5069| Best HMM Match : Fork_head (HMM E-Value=0) 28 7.9
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +1
Query: 454 ADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 633
AD R + E E ++ + + +KR EEE+ +K + E K+ KLE +KELR+K
Sbjct: 268 ADKRAEEEEEKRKREKELEMLRQIEEKKRKLEEEERIKEEVEKQKKI-KLEQQEKELRDK 326
Query: 634 VAKKTAEAQAAK 669
+ K E + K
Sbjct: 327 LLKNLKEMKERK 338
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 454 ADIREKLEYESEAYPF-TIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRN 630
A+ R++LE + + ++E+++ KR EEE+ KR++E+ + ++E K++L
Sbjct: 242 AEKRKRLEEQRKVESLHLLKELLKRVADKRAEEEEEKRKREKEL-EMLRQIEEKKRKLEE 300
Query: 631 K 633
+
Sbjct: 301 E 301
>SB_31142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 460 IREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMW-KKELRNKV 636
+R+ Y SE ++E ++ +K E++ D E+ +M++LEM KKEL NK+
Sbjct: 144 VRDVKHYSSENAK--LEEALKRACEKHAEHMEQL---DDELDQQMSRLEMRIKKELENKI 198
Query: 637 AKKTAEAQAAKD 672
KK E Q K+
Sbjct: 199 KKKEPEEQKLKE 210
>SB_48082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 499 FTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMW 612
FT+ ++ + + KR A+ ++++K D EIVAKM L W
Sbjct: 82 FTMWKLNQEDKSKRRAKLQEVMKTDSEIVAKMDDLPAW 119
>SB_58489| Best HMM Match : Ank (HMM E-Value=4.7e-08)
Length = 1188
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/53 (28%), Positives = 32/53 (60%)
Frame = +1
Query: 478 YESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKV 636
++ E +P + Q +E Q L ++++I +++QE+ K +L+ KK +NK+
Sbjct: 313 FDEELFPRSGQLSLERIHQIVLQQQQQIAEKEQELSTKERQLQEIKKRAQNKI 365
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = +1
Query: 457 DIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKV 636
D + +L + +A ++ E TR++R E+E+ KR QE++ + K E ++E + K+
Sbjct: 838 DAKRRLRLQKKADLDARRKQEEETRKQRQLEQEEEAKRHQELL--LRKQEFEEQERQRKI 895
Query: 637 AK-KTAEAQAAKD 672
A+ K + + KD
Sbjct: 896 AEAKHQQEEREKD 908
>SB_49663| Best HMM Match : TolA (HMM E-Value=0.059)
Length = 591
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Frame = +1
Query: 505 IQEMMETTRQK-RLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQ 660
++EM T++K R+ EEE+ K +E AK + ++E++ + KK EA+
Sbjct: 305 VEEMQRKTQEKKRIEEEEQKRKEAEEKKAKEIEQRRMEEEIKKEEEKKRKEAE 357
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +1
Query: 463 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 642
++K E E I E+ T R E E+ R ++ ++ +L+ KKEL+ KV +
Sbjct: 1685 KKKNHEEEERLEAEIAELANTVETLR-TELEQSQVRLSKLQTQVKELKSEKKELQRKVDE 1743
Query: 643 KTAEAQAAKD 672
T+EAQ ++
Sbjct: 1744 LTSEAQRRRN 1753
>SB_41501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/72 (25%), Positives = 29/72 (40%)
Frame = +1
Query: 229 VIIDDSDVAQAKEEEINKKRNISRLSMSHHNLVNGKRPYDYPMSLAHLTVKYNRKMYGKY 408
+I+ D + Q K E ++++ S ++ NG +DY Y RK +Y
Sbjct: 251 IIVSDWPLTQTKSERVSREPMHSCQNIFIQTYYNGLTEHDYHRCCIDAAKGYFRKALTRY 310
Query: 409 GSASGVNPSLCW 444
G V L W
Sbjct: 311 GPLFAVTFLLFW 322
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/70 (27%), Positives = 38/70 (54%)
Frame = +1
Query: 463 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 642
++K+ E E IQE ME R++R EE K + ++E KM ++E+ +++ + K
Sbjct: 589 QQKIAEEQERLR-KIQEQMELERKRREEEERKRKQEEEERKRKM-QMELQRRKEEEEQKK 646
Query: 643 KTAEAQAAKD 672
+ E + ++
Sbjct: 647 RDEEERKRRE 656
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 448 TRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQE-IVAKMAKLEMWKKEL 624
T+AD KLE E+E+ F ++ + RQ L+ E + LK E AK+ +L + +EL
Sbjct: 380 TKADRIRKLEQENESLSFVVETKSKFERQ--LSVERETLKTTLERESAKLKRLSLENEEL 437
Query: 625 R 627
+
Sbjct: 438 Q 438
>SB_2978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 513 DDGDNQAETSS*RGKDTEERSGNCSQNGKIRDVEKGTSKQSRQE 644
DD D+ E K TE++SGN K D EK T ++S E
Sbjct: 28 DDEDDNTEEGKNDEKPTEQKSGNEKPVKKSSDEEKPTEQKSDDE 71
>SB_54268| Best HMM Match : Vicilin_N (HMM E-Value=0.077)
Length = 371
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +1
Query: 460 IREKLEYESEAYP--FTIQEMMETTRQKRLAEEEKILKR----DQEIVAKMAKLEMWKKE 621
IR+K +E E +Q+ + QK L +EE++L +QE+ K +L+ W++E
Sbjct: 250 IRQKDMFEKELIKQKSNLQDELSDIEQKLLIKEEQLLHEKELLEQEMQHKEQRLQEWERE 309
Query: 622 LRNK 633
+ K
Sbjct: 310 FQQK 313
>SB_55227| Best HMM Match : Ank (HMM E-Value=1.9e-30)
Length = 662
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 489 SIPFHNTRDDGDNQAETSS*RGK---DTEERSGNCSQNGKIRDVEKGTSKQSRQEN 647
SIP +TRD +N ++T +G G C NG ++ V K S+ +N
Sbjct: 256 SIPLRDTRDSVNNYSDTEIKKGSTETSNVHNEGTCQTNG-LQKVSKDISRSPHYQN 310
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 466 EKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKK 645
EK++ + E Q+ +E T+ ++ E+++ KRD IV KLE L + K+
Sbjct: 1040 EKVKRKLEGDLKMTQQTLEETQAEKARTEDEVRKRDANIVELSGKLED-SNNLVESLRKR 1098
Query: 646 TAEAQA 663
E +A
Sbjct: 1099 IRELEA 1104
>SB_56938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 653
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C +KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 396 CYLIKCFDGDISPSELVRYTAESPD-EDIPQLFVESLESDIKKIYDKFRFPKKVKMTPKD 454
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 455 KIAYNDATHCHICEGELGEDKVLDHCHLTGKY 486
>SB_56692| Best HMM Match : DNA_pol_B_2 (HMM E-Value=1e-04)
Length = 963
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C +KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 185 CYLIKCFDGDISPSELVRYTAESPD-EDIPQLFVESLESDIKKIYDKFRFPKKVKMTPKD 243
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 244 KIAYNDATHCHICEGELGEDKVLDHCHLTGKY 275
>SB_37184| Best HMM Match : Endonuclease_7 (HMM E-Value=0.032)
Length = 328
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C +KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 196 CYLIKCFDGDISPSELVRYTAESPD-EDIPQLFVESLESDIKKIYDKFRFPKKVKMTPKD 254
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 255 KIAYNDATHCHICEGELGEDKVLDHCHLTGKY 286
>SB_17975| Best HMM Match : Rho_N (HMM E-Value=0.0017)
Length = 1064
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C +KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 469 CYLIKCFDGDISPSELVRYTAESPD-EDIPQLFVESLESDIKKIYDKFRFPKKVKMTPKD 527
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 528 KIAYNDATHCHICGGELGEDKVLDHCHLTGKY 559
>SB_39183| Best HMM Match : LEA_4 (HMM E-Value=2.7)
Length = 300
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +1
Query: 448 TRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEE---KILKR---DQEIVAKMAKLEM 609
TR D R+K+ A Q+M ETTR+ R A++E KI KR Q+I +
Sbjct: 198 TRDDTRDKICKGRNAR----QDMQETTREARYAKDETRGKICKRRNARQDIQGTTRETRY 253
Query: 610 WKKELRNKVAK 642
K++ R K K
Sbjct: 254 AKEDTRGKTCK 264
>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
Length = 1421
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 418 SGVNPSLCWPTRADIREKLEYESEAYPFTIQEMME 522
+G+NP++ +P A R+KL ES T + +E
Sbjct: 377 TGINPNIAFPCHASQRQKLYVESGCMTLTSDQAVE 411
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 373 TVKYNRKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETTRQKRLAEE 552
+VK R + K S S S P+R + E+ +E E++ T +E TTRQ+ AEE
Sbjct: 1617 SVKAKRVVKKKRRSHSSTASSDGKPSRDETTEEHVFEFESH--TSEETHVTTRQEPTAEE 1674
Query: 553 EK 558
E+
Sbjct: 1675 EE 1676
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 502 TIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQAAKD 672
T+Q + E T Q+R +E + +D+E++A KL EL ++ + A K+
Sbjct: 231 TLQRLQERTSQERDNLKESLNTKDKEVLALDEKLRRQNAELDKLTSELSTTKMALKN 287
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C +KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 605 CYLIKCFDGDISPSELVRYTAESPD-EDIPQLFVESLESDIKKIYDKFRFPKKVKMAPKD 663
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 664 KIAYNDATHCHICEGELGEDKVLDHCHLTGKY 695
>SB_59247| Best HMM Match : Synaphin (HMM E-Value=0.00036)
Length = 217
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 481 ESEAYPFTIQEMMETTRQKRLAEEEKILKRD-QEIVAKMAKLEMWKKELRNKVAKK 645
+S FT + +++ L + E+ L++D QE + K AKLE + + R K+ K
Sbjct: 18 QSTVGEFTRDSSNDGFKKEELEKAEQQLQKDEQERIKKFAKLEAKRSKHREKILNK 73
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 427 NPSLCWP-TRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKL 603
+PS P T +R+K E E + + E K+ E+E++ K+ ++ + +L
Sbjct: 310 SPSTTSPQTNKALRQKEEKEKQRLEAKAAKEKERLEAKQKKEQERLEKQAEKEKKEKERL 369
Query: 604 EMWKKELRNKVAKK 645
E ++E ++++ KK
Sbjct: 370 EKKQREEKDRLEKK 383
>SB_47879| Best HMM Match : ATP-synt_Eps (HMM E-Value=3.8)
Length = 267
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/86 (24%), Positives = 41/86 (47%)
Frame = +1
Query: 85 YNFNSSTRITKFS*KMNLCVRLKCFRYNISSHLYRYSTTSEAIEQNEQVIIDDSDVAQAK 264
YN +++ RI + NL + + Y + + ++T +A++ + +V+
Sbjct: 2 YNISNNIRICAYR---NLILSVTTRIYKSIADATKTNST-KALQTHLEVLQSQGKPV-TY 56
Query: 265 EEEINKKRNISRLSMSHHNLVNGKRP 342
EEE KK + S HH L++G +P
Sbjct: 57 EEETRKKISCSECGKRHHTLLHGAKP 82
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 457 DIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKIL--KRDQEIVAKMAKLEMWKKEL 624
++R K E E EA + +E E +RQK E+E+++ KR Q + A KL + E+
Sbjct: 735 ELRRKQEAEKEALRRSKEEE-ERSRQKEREEQERLMLEKRQQFVEATKNKLVFNEAEM 791
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +1
Query: 463 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNK 633
+E+++ E E +E E +QK ++EK +R++E + K + E+ +KEL+ +
Sbjct: 335 KERIQQEKEKQ----KERREKEKQKHQEKKEKERQREKEKLEKEKQKELERKELQRQ 387
>SB_55389| Best HMM Match : Las1 (HMM E-Value=0.074)
Length = 444
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/104 (20%), Positives = 43/104 (41%)
Frame = +1
Query: 349 YPMSLAHLTVKYNRKMYGKYGSASGVNPSLCWPTRADIREKLEYESEAYPFTIQEMMETT 528
Y L L K + + + + V P+ + + +E+ Y I+ M T
Sbjct: 82 YISKLTTLATKSSSNAMNEIQTGAKVQPAAKSIEKENKKEEQVVHDARYE-EIEAFMATQ 140
Query: 529 RQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAKKTAEAQ 660
R E+K+ K EI + ++E WK++ ++ ++ E +
Sbjct: 141 RVFNAKIEDKVTKNTIEIGEQSIEIEDWKQKTKHGISDAKRECE 184
>SB_24885| Best HMM Match : HOOK (HMM E-Value=0.00023)
Length = 873
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 448 TRADIREKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELR 627
++AD EKLE ++ Y ++++ ++ +EE L D ++V + L + KE R
Sbjct: 262 SKADRVEKLEADASKYKDKLRDLEYLRKRSEELKEENELLYDNKLVLEQQLLGLSAKEER 321
Query: 628 NKVAKK 645
++ ++
Sbjct: 322 IEILEE 327
>SB_22224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +1
Query: 463 REKLEYESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVAK 642
REK + E E +Q E QKR EEE KR++E K + E ++E +K K
Sbjct: 985 REKKDKEKEKRERELQRKKERDEQKRKKEEE---KRERE-EKKRKEEERKRREKADKELK 1040
Query: 643 K 645
K
Sbjct: 1041 K 1041
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 481 ESEAYPFTIQEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKV 636
ESE++ + E+ E +++ EE + E++ K+ KLE KEL++++
Sbjct: 1707 ESESFERKMNELDERIKERNAVAEE-LSAHKAELLTKLNKLEGANKELQDQL 1757
>SB_51323| Best HMM Match : LicD (HMM E-Value=0.0088)
Length = 695
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Frame = +1
Query: 139 CVRLKCFRYNIS-SHLYRYSTTSEAIEQNEQVIID--DSDVAQA-------KEEEINKKR 288
C KCF +IS S L RY+ S E Q+ ++ +SD+ + K+ ++ K
Sbjct: 63 CYLNKCFDGDISPSELVRYTAESPD-EDISQLFVESLESDIKKIYDKFRFPKKVKMTPKD 121
Query: 289 NISRLSMSHHNLVNGKRPYDYPMSLAHLTVKY 384
I+ +H ++ G+ D + HLT KY
Sbjct: 122 KIAYNDATHCHICEGELGEDKVLDHCHLTGKY 153
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +1
Query: 454 ADIREKLEYESEAYPFTI-------QEMMETTRQKRLAEEEKILKRDQEIVAKMAKLEMW 612
AD++EK + E +A + E+M+ + K+ ++D+ I A L+
Sbjct: 1397 ADLKEKFDLEEKALLDKLAEKENSEHELMQRIESTEQENQAKLNQKDKSIEELQASLDAV 1456
Query: 613 KKELRNKVAKKTAE 654
KK+ +K+A+ ++
Sbjct: 1457 KKDFNDKLAETQSQ 1470
>SB_5069| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 331
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 519 GDNQAETSS*RGKDTEERSGN--CSQNGKIRD 608
G+NQ E +S G DTE + N C++N + RD
Sbjct: 20 GENQQEPASDDGSDTESDALNTDCNENARERD 51
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,825,792
Number of Sequences: 59808
Number of extensions: 368236
Number of successful extensions: 1323
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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