Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c04
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.95 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.8  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 511 EMMETTRQKRLAEEEKILKRDQEIVAKMAKLE 606
           E+ +   ++  AEEE + + ++   AK AKLE
Sbjct: 432 ELQKKAEEEEAAEEEALREAEEAAAAKAAKLE 463


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +1

Query: 532 QKRLAEEEKILKRDQEIVAKMAKLEMWKKE 621
           +KR  E +++LK  ++ V KM + EM KKE
Sbjct: 263 EKRKEEADEVLKEKKKEVGKMTR-EMAKKE 291


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
 Frame = +1

Query: 478 YESEAYPFTIQEMMETTR------QKRLAEEEKILKRDQEIVAKMAKLEMWKKELRNKVA 639
           +E E    T++E +E +R      QK + EE+  L + +  V +  +    KK+    V 
Sbjct: 775 FEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVE 834

Query: 640 KKTAEAQAAKD 672
            + A  QA+ D
Sbjct: 835 AEIARIQASID 845


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = +1

Query: 502  TIQEMMETTRQKRLA 546
            T+++++E TRQKR+A
Sbjct: 1607 TVRQLLERTRQKRMA 1621


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +1

Query: 502  TIQEMMETTRQKRLA 546
            T+++ +E TRQKR+A
Sbjct: 1604 TVRQFLERTRQKRMA 1618


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 483 IRSIPFHNTRDDGDNQAETSS*RGKDTEERSGNCSQN 593
           +RS    ++RD+ D+    SS    +    SGN + N
Sbjct: 177 LRSERIRDSRDERDSLPNASSNNSNNNNNSSGNNNNN 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,913
Number of Sequences: 2352
Number of extensions: 12661
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)