Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11c02
         (664 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...   101   5e-22
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...   101   5e-22
U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of hsp70...    38   0.006
AF303269-1|AAG50227.1|  266|Caenorhabditis elegans Hsp70-interac...    38   0.006
Z66512-3|CAA91325.1|  179|Caenorhabditis elegans Hypothetical pr...    37   0.011
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    34   0.078
AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical ...    34   0.078
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    33   0.24 
AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical ...    29   2.9  
Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score =  101 bits (242), Expect = 5e-22
 Identities = 63/181 (34%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
 Frame = +1

Query: 133 LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 300
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP        G    +           
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66

Query: 301 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 480
                            +D EGVI P++   +  MGD                   A  A
Sbjct: 67  ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125

Query: 481 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLNCDSAAA 660
           FS   +D A+  +TAAI+ NP SA+L AKR  V LKL +P A I DC  A+ +N DSA  
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQG 185

Query: 661 Y 663
           Y
Sbjct: 186 Y 186


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score =  101 bits (242), Expect = 5e-22
 Identities = 63/181 (34%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
 Frame = +1

Query: 133 LKSFVEICKTQPQLLHHPQLAFFKDYLISLGVSLPTATF----GAKDFTAAGDXXXXXXX 300
           LK FV +C+  P +LH P+  FFKDYL+SLG +LP        G    +           
Sbjct: 7   LKQFVGMCQANPAVLHAPEFGFFKDYLVSLGATLPPKPADKPEGKCPMSEEPKKETPAAE 66

Query: 301 XXXXXXXXXXXXXXXXXLDMEGVIAPDQTDESQDMGDPNXXXXXXXXXXXXXXXXXAMRA 480
                            +D EGVI P++   +  MGD                   A  A
Sbjct: 67  ATPEPEIPKPEEIPFPKIDNEGVIEPEEA-VALPMGDSAKEATEDEIEKASEERGKAQEA 125

Query: 481 FSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLNCDSAAA 660
           FS   +D A+  +TAAI+ NP SA+L AKR  V LKL +P A I DC  A+ +N DSA  
Sbjct: 126 FSNGDFDTALTHFTAAIEANPGSAMLHAKRANVLLKLKRPVAAIADCDKAISINPDSAQG 185

Query: 661 Y 663
           Y
Sbjct: 186 Y 186


>U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of
           hsp70-interacting protein(chip family) protein 1
           protein.
          Length = 266

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 475 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLN 642
           + +  ++YD+A++ Y+ AI++NP     +  R   Y +LN      +DC  AL L+
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRALELS 68


>AF303269-1|AAG50227.1|  266|Caenorhabditis elegans
           Hsp70-interacting protein protein.
          Length = 266

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 475 RAFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLN 642
           + +  ++YD+A++ Y+ AI++NP     +  R   Y +LN      +DC  AL L+
Sbjct: 14  KCYMNKRYDDAVDHYSKAIKVNPLPK-YYQNRAMCYFQLNNLKMTEEDCKRALELS 68


>Z66512-3|CAA91325.1|  179|Caenorhabditis elegans Hypothetical
           protein F52H3.5 protein.
          Length = 179

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 493 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXL 639
           + DEAI  +T A+++ P++   +  R Q Y   NKP   + D   AL L
Sbjct: 58  RLDEAIEKFTKALEVCPKNPSAYNNRAQAYRLQNKPEKALDDLNEALSL 106


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 34.3 bits (75), Expect = 0.078
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 493 KYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLNCD 648
           ++ +A+  Y AAI+L+P+S     +R   YL + +  A I D    L L  D
Sbjct: 41  QFADALTQYHAAIELDPKSYQAIYRRATTYLAMGRGKAAIVDLERVLELKPD 92


>AF016422-4|AAG24172.1|  320|Caenorhabditis elegans Hypothetical
           protein R09E12.3 protein.
          Length = 320

 Score = 34.3 bits (75), Expect = 0.078
 Identities = 15/62 (24%), Positives = 33/62 (53%)
 Frame = +1

Query: 478 AFSEQKYDEAINLYTAAIQLNPQSALLFAKRGQVYLKLNKPNACIKDCTHALXLNCDSAA 657
           A+ ++ +++A   Y  AI+L+P +   +  +  VY +  K   C++ C  A+ +  ++ A
Sbjct: 15  AYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRA 74

Query: 658 AY 663
            Y
Sbjct: 75  DY 76


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
            ZK328.7a protein.
          Length = 1332

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +1

Query: 487  EQKYDEAINLYTAAIQLNPQSALLFA-KRGQVYLKLNKPNACIKDCTHALXLN 642
            EQKY EA  +Y  A     +    F  K    YLK  +  ACI+ C   L LN
Sbjct: 1260 EQKYVEAYKMYEKAFMATKERNPGFGYKLAFTYLKAKRLFACIETCQKVLDLN 1312


>AL023828-7|CAA19452.1|  881|Caenorhabditis elegans Hypothetical
           protein Y17G7B.5a protein.
          Length = 881

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 293 MKKKWNRHLTRNRSLNQM 346
           MKK ++RHLT NRS N++
Sbjct: 788 MKKTFSRHLTENRSANEL 805


>Z73976-5|CAA98282.1|  283|Caenorhabditis elegans Hypothetical
           protein T07C12.9 protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 159 NTAATITPSTIGVF*GLSDISWCIIADRYFWC 254
           NTA  + P    ++ G+ + +WC    R F C
Sbjct: 208 NTAGAVKPGGYLIYGGIFEETWCSFGGRKFTC 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,576,988
Number of Sequences: 27780
Number of extensions: 256954
Number of successful extensions: 626
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)