Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b24
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 33 0.12
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 33 0.21
Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine pal... 32 0.36
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 0.48
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.48
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.48
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 31 0.63
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 31 0.63
AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical ... 31 0.84
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.5
Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical pr... 30 1.5
X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic int... 30 1.5
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 1.5
Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical pr... 29 1.9
U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical ... 29 1.9
AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical ... 29 2.6
AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical ... 29 2.6
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 28 4.5
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 28 4.5
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 28 4.5
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 28 4.5
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 4.5
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 28 5.9
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 5.9
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical... 28 5.9
AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical... 28 5.9
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 28 5.9
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 28 5.9
Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical pr... 27 7.8
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 7.8
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 7.8
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 27 7.8
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 27 7.8
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 27 7.8
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 27 7.8
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 27 7.8
AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 relate... 27 7.8
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 27 7.8
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 27 7.8
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 27 7.8
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 33.5 bits (73), Expect = 0.12
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 2/155 (1%)
Frame = +1
Query: 94 GEHLDTFKTLNGDFSDTTVRERKSTAQAEL-DHHLNQNVDDGISNGRSLHAKKPIIVKKK 270
G +D + + D D R+R+ Q E + ++ D + +K KK+
Sbjct: 28 GLGMDQKEIVGDDKKDKEARKRERKLQDEFAELKKDEEKDKEEAEKEKNEKEKKEEEKKE 87
Query: 271 IGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID-DHLMSEE 447
G+ D E+K+ EN N++ K K D++ + T TED + + ++
Sbjct: 88 DGHEKKEDKKEDKK-----ENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKK 142
Query: 448 DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMD 552
+ K+ K KE E D +K K+ + + D
Sbjct: 143 EKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKED 177
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 32.7 bits (71), Expect = 0.21
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Frame = +1
Query: 196 NQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 375
N+N ISNGR + KK +V+ + DSDEE + +++ + D E
Sbjct: 142 NENKVTLISNGREIAFKKTEVVESDDEQMIGLDSDEELEDEDETDIDEDEMMIDPKDIER 201
Query: 376 ALTSTGMGRSTTTED--IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM 549
+ + ED I+D +E+ + + A E E D+ ++ S A
Sbjct: 202 YINFESVEDEEDMEDEEIEDEEFEDEEFEDEEEEADEQ-EEEEEDVSDEESVVSEMDADS 260
Query: 550 DEINLEAGAE 579
D+ AG +
Sbjct: 261 DDEGFIAGKD 270
>Z92832-4|CAB07373.1| 488|Caenorhabditis elegans Hypothetical
protein F31D4.5 protein.
Length = 488
Score = 32.3 bits (70), Expect = 0.27
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 409 TTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLE 567
TT+ + D L +++K LKM E LE++ +++K+ A M+ +N+E
Sbjct: 260 TTKKLKDDL---QNVKNELKMTNEMKKTLEQEKMSLNSKTEHLQANMESLNIE 309
>AF039047-3|AAB94222.1| 748|Caenorhabditis elegans Carnitine
palmitoyl transferaseprotein 4 protein.
Length = 748
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 430 HLMSEEDMKQSLKMAKEAIANLERDLQK 513
HLMSEED Q L+M+++ ++N R +Q+
Sbjct: 162 HLMSEEDYDQLLEMSRKFVSNEGRSIQR 189
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/115 (19%), Positives = 55/115 (47%)
Frame = +1
Query: 244 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 423
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9281 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9337
Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
+ SE + + + KE + QK++ + + K + + LEA A++++
Sbjct: 9338 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKR 9392
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 274 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 447
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 448 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 540
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/115 (19%), Positives = 55/115 (47%)
Frame = +1
Query: 244 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 423
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9301 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9357
Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
+ SE + + + KE + QK++ + + K + + LEA A++++
Sbjct: 9358 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKR 9412
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 274 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 447
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 448 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 540
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.5 bits (68), Expect = 0.48
Identities = 22/115 (19%), Positives = 55/115 (47%)
Frame = +1
Query: 244 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI 423
+KP K + + D+ +E + ++E +EK K K+ ++ + + + ++ T +
Sbjct: 9301 EKPETAKLESKSKMTEDTTKE---SDNKETVDEKPKKKVLKKKTEKSDSTISETSETSAV 9357
Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
+ SE + + + KE + QK++ + + K + + LEA A++++
Sbjct: 9358 ESAGPSESETQNVAAVDKEKKQKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKR 9412
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +1
Query: 274 GYHLYRDSDEEKRLTSSRENCNEKVK-VKLCDEEAALTSTGMGRSTTTEDIDD-HLMSEE 447
G ++ +++ +R + + +V+ +K C E L M E ++S++
Sbjct: 1949 GQEIFANTNTVERNSKAGAKAKGEVENLKKCVETLLLFDAEMDMKDIKESSPKKEIISKK 2008
Query: 448 DMKQ---SLKMAKEAIANLERDLQKMDTKSSPKS 540
D + +K+ ++ + ++ERDL KM+ S KS
Sbjct: 2009 DQQSLDDQIKVTQQILKDVERDLNKMERTSPGKS 2042
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +1
Query: 397 GRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGA 576
GR+ IDD L++ +++ + + K IA LE ++ ++ ++ ++++ + +E
Sbjct: 166 GRAEDRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQ 225
Query: 577 EVRKDID 597
E ID
Sbjct: 226 ETLLRID 232
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 31.1 bits (67), Expect = 0.63
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +1
Query: 397 GRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGA 576
GR+ IDD L++ +++ + + K IA LE ++ ++ ++ ++++ + +E
Sbjct: 166 GRAEDRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVRIELDQ 225
Query: 577 EVRKDID 597
E ID
Sbjct: 226 ETLLRID 232
>AL033514-7|CAA22114.1| 648|Caenorhabditis elegans Hypothetical
protein Y75B8A.7 protein.
Length = 648
Score = 30.7 bits (66), Expect = 0.84
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = +1
Query: 415 EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDI 594
E+++D ++ +ED +++ + L+ DL+KM+ + + + + E E + +K I
Sbjct: 133 EELEDEMIDDEDEADLFNLSESDLKTLDADLKKMEEEEAGEEKEEVEKATEQPKKFKKSI 192
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +1
Query: 304 EKRLTSSRE--NCNEKVKV---KLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 468
EK++ SS N +EK +V K + A + T + +D + E+D ++ K
Sbjct: 1089 EKKMLSSEHLSNDSEKARVEIGKFLAKSAEFSPTPAVAVAILDVFEDLKLDEDDDAETRK 1148
Query: 469 -MAKEAIANLERDLQKMD 519
MAK A+A L++D K+D
Sbjct: 1149 IMAKYALAYLKKDWSKVD 1166
>Z81140-5|CAB03487.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +1
Query: 343 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 522
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 523 KSSPKSAQMDEINLEAGAEVRKDID 597
++ ++++ + E E ID
Sbjct: 208 ENFRLTSELQRVRSELDQETLLRID 232
>Z54282-5|CAA91057.4| 581|Caenorhabditis elegans Hypothetical
protein F52E10.5 protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +1
Query: 343 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 522
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 523 KSSPKSAQMDEINLEAGAEVRKDID 597
++ ++++ + E E ID
Sbjct: 208 ENFRLTSELQRVRSELDQETLLRID 232
>X70831-1|CAA50179.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +1
Query: 343 KVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT 522
K+K +L + GR+ ID+ L++ +++ + + K IA LE ++ ++
Sbjct: 148 KIKDQLDELRKKFEEAQKGRAEDRLKIDELLVTLSNLEAEINLLKRRIALLEEEVARLKK 207
Query: 523 KSSPKSAQMDEINLEAGAEVRKDID 597
++ ++++ + E E ID
Sbjct: 208 ENFRLTSELQRVRSELDQETLLRID 232
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 29.9 bits (64), Expect = 1.5
Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 1/157 (0%)
Frame = +1
Query: 130 DFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEK 309
D + + K + +A +D ++ S RS +KK +++ DS+EE
Sbjct: 289 DEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSKKSKKESDEEQQAS-----DSEEEV 343
Query: 310 RLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIA 489
+K K +E + S+G + +++ K+S +E +
Sbjct: 344 VEVKKNSKSPKKTPKKTAVKEESEESSGDEEEEVVKKKKSSKINKRKAKESSSDEEEEVE 403
Query: 490 NLERDLQKMDTKSSPKSAQMDEINLEAG-AEVRKDID 597
+ K KSS KSA +E E+ E +++D
Sbjct: 404 ESPKKKTKSPRKSSKKSAAKEESEEESSDNEEEEEVD 440
>Z78060-5|CAB01492.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 298 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 472 AKEAIANLERDLQ 510
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>U23511-1|AAC46791.1| 859|Caenorhabditis elegans Hypothetical
protein C32D5.3 protein.
Length = 859
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 373 AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 468
+AL ST G +T TE+ L + ED+ +SLK
Sbjct: 645 SALNSTSQGATTITEEDQTLLFNAEDIAESLK 676
>AL022271-2|CAA18350.1| 216|Caenorhabditis elegans Hypothetical
protein C34D1.5 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 298 DEEKRL--TSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
DE+KRL T + C EK+K K D E LT + L E+ + L+
Sbjct: 111 DEKKRLRNTEAARRCREKIKRKTDDLETELTRLTARNEVMNQHRIRLLSQVEEQMRMLEN 170
Query: 472 AKEAIANLERDLQ 510
K LE +++
Sbjct: 171 IKSRNPELEAEIR 183
>AF040646-4|AAO38629.1| 395|Caenorhabditis elegans Hypothetical
protein H17B01.4b protein.
Length = 395
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 535 KSAQMDEINLEAGAEVRKDIDV 600
K+AQ+ EI E GA+VRK +D+
Sbjct: 268 KNAQIVEITAENGAQVRKSVDI 289
>AF040646-3|AAK31541.1| 946|Caenorhabditis elegans Hypothetical
protein H17B01.4a protein.
Length = 946
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 535 KSAQMDEINLEAGAEVRKDIDV 600
K+AQ+ EI E GA+VRK +D+
Sbjct: 268 KNAQIVEITAENGAQVRKSVDI 289
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 340 EKVKVKLCDEE--AALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 513
EK + K DE AAL+ + ++ + EED+ +S+ A L
Sbjct: 182 EKPEEKDIDESLNAALSDKKEKKEVASDKKKESKKDEEDINESMNAALSDERKKSASLAS 241
Query: 514 MDTK-SSPKSAQMDEINLEA 570
D K SS K DE NL A
Sbjct: 242 SDKKESSKKDESSDEANLSA 261
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 427 DHLMSEEDMKQSLKMAKEA-IANLERDLQKMDTKSSPKSAQMDEINLEAGA 576
DH + E+ K + + K+ + ++ K +TK SP++ +DE+ +A +
Sbjct: 179 DHCIGEKGKKINGSLEKDKKVKESGKEKIKKETKKSPQTMTLDEVQFDASS 229
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 130 DFSDTTV-RER---KSTAQAELDHHLNQNVDDGISNGRSLHAKKPII 258
D +TT+ RE+ KST Q ++D + + +D I N L ++KP I
Sbjct: 425 DQGNTTLKREKSIEKSTRQGKIDKSIEKLIDKSIDNTEKLSSQKPKI 471
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 367 EEAALTSTGMGRSTTTEDIDDHLMSE 444
E+A +T TG G+ +DDHL+S+
Sbjct: 628 EKANVTFTGEGKKEVYASVDDHLLSD 653
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 516
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1181 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1212
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 516
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1084 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1115
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKM 516
+DD L++ +DM+Q L+ KEA+ + + K+
Sbjct: 1095 VDDLLIASKDMEQHLQDVKEALTRIRKSGMKL 1126
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +1
Query: 13 VFHP*AMETLIVLFAVIYTIIA--APAQ---LGEHLDTFKTLNGDFSDTTVRERKS 165
VF P +T V A++ +A AP + L EH DTF+ L D D ++RE S
Sbjct: 1558 VFVPVRRQTRPVAVALLTMALADGAPKRFLRLAEHDDTFQALLADIEDESLRESVS 1613
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQKMDT-KSSPKSAQMDEI 558
DD + +++KQ + MAK + + D+Q++ T +S+ K +M ++
Sbjct: 254 DDQFLMNKNLKQVMNMAK-GLKSSREDIQRLQTLRSNTKELEMVDL 298
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 442 EEDMKQSLKMAKEAIANLERDLQKMDTKS 528
++D+K+SLKM K ++ N R L K + KS
Sbjct: 16 DDDVKESLKMRKHSLVN--RQLSKKERKS 42
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 442 EEDMKQSLKMAKEAIANLERDLQKMDTKS 528
++D+K+SLKM K ++ N R L K + KS
Sbjct: 34 DDDVKESLKMRKHSLVN--RQLSKKERKS 60
>AL132860-32|CAO82074.1| 570|Caenorhabditis elegans Hypothetical
protein Y56A3A.7b protein.
Length = 570
Score = 27.9 bits (59), Expect = 5.9
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Frame = +1
Query: 250 PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVK-----LCDEEAALTSTGMGRSTTT 414
P+IV+ + L D ++EKR REN ++++ K L E+ A + R
Sbjct: 260 PVIVETQEKPDL-NDEEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMN---ARRKRL 315
Query: 415 EDIDDHLMSEEDMKQSLKMA-KEAIANLERDLQKMD-TKSSPKSAQMDEINLEAGAE 579
++I L +E K+ L A + ++ D + + T +P+ +Q DE A AE
Sbjct: 316 QEIRKMLEKQEHEKEKLDAAISNSAVAVQNDGEGIALTPETPRPSQEDEAEAPAAAE 372
>AL132860-31|CAB60519.2| 457|Caenorhabditis elegans Hypothetical
protein Y56A3A.7a protein.
Length = 457
Score = 27.9 bits (59), Expect = 5.9
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Frame = +1
Query: 250 PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVK-----LCDEEAALTSTGMGRSTTT 414
P+IV+ + L D ++EKR REN ++++ K L E+ A + R
Sbjct: 260 PVIVETQEKPDL-NDEEKEKRREEIRENIKKEMEKKEQVNTLIREKLASMN---ARRKRL 315
Query: 415 EDIDDHLMSEEDMKQSLKMA-KEAIANLERDLQKMD-TKSSPKSAQMDEINLEAGAE 579
++I L +E K+ L A + ++ D + + T +P+ +Q DE A AE
Sbjct: 316 QEIRKMLEKQEHEKEKLDAAISNSAVAVQNDGEGIALTPETPRPSQEDEAEAPAAAE 372
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 106 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 261
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/52 (25%), Positives = 30/52 (57%)
Frame = +1
Query: 106 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIV 261
D F +G+ ++ +RE+K + +L H L+ + ++ + S+H +PI++
Sbjct: 193 DPFDEDSGNSNENQLREKKLHKKEQLAHRLSSSSEEIVE--ASIHEDEPIVM 242
>Z92813-3|CAB07287.1| 621|Caenorhabditis elegans Hypothetical
protein T28A8.3 protein.
Length = 621
Score = 27.5 bits (58), Expect = 7.8
Identities = 25/103 (24%), Positives = 43/103 (41%)
Frame = +1
Query: 121 LNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSD 300
L GD S + +RK A + DHH N D + +S +K + + D
Sbjct: 248 LEGDHSRSARNKRKYAAYRKTDHHHLSNAKDPKLSRKS--GRKSDLE--------FSDKS 297
Query: 301 EEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDD 429
+E + S+ CN + + C++ A G S E+++D
Sbjct: 298 DEDDVDSAISKCNFPKRAR-CEKSADPELHESGESDDDEEMED 339
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 7.8
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 223 NGRSLHAKKPIIVKKKIGYH---LYRDSDEE-KRLTSSRENCNEKVKVKLCDEEAALTST 390
N +S+ KK + +K+ G + + + +D E +R E E + EE T+
Sbjct: 585 NEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHANDERKREEQKRTAA 644
Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEI 558
+S + + E ++ K KEA +LERDLQ + T+ +++++
Sbjct: 645 EFDQSRVARKLAGIEANYELLQNDYKSMKEARKDLERDLQDVITEKRRLEIRVEQL 700
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.5 bits (58), Expect = 7.8
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Frame = +1
Query: 223 NGRSLHAKKPIIVKKKIGYH---LYRDSDEE-KRLTSSRENCNEKVKVKLCDEEAALTST 390
N +S+ KK + +K+ G + + + +D E +R E E + EE T+
Sbjct: 585 NEKSVQLKKALDERKENGAYQQSVAKATDAEWERKMQFYEKQLEHANDERKREEQKRTAA 644
Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEI 558
+S + + E ++ K KEA +LERDLQ + T+ +++++
Sbjct: 645 EFDQSRVARKLAGIEANYELLQNDYKSMKEARKDLERDLQDVITEKRRLEIRVEQL 700
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 379 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 513
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKE------AIANLERDLQKMDTK 525
DEE + +ED ++H+ EE K+ K+A++ IA +R L ++++
Sbjct: 1202 DEEEEIVMKSKRIIPDSEDEEEHIEQEEAQKKLEKVAEKPNTLMGMIAGRKRKLAQLESD 1261
Query: 526 SSPKSAQMDEINLE 567
SS +S D E
Sbjct: 1262 SSDESDDDDSAEKE 1275
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 379 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 513
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +1
Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKE------AIANLERDLQKMDTK 525
DEE + +ED ++H+ EE K+ K+A++ IA +R L ++++
Sbjct: 1202 DEEEEIVMKSKRIIPDSEDEEEHIEQEEAQKKLEKVAEKPNTLMGMIAGRKRKLAQLESD 1261
Query: 526 SSPKSAQMDEINLE 567
SS +S D E
Sbjct: 1262 SSDESDDDDSAEKE 1275
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 379 LTSTGMGRSTTT--EDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 513
L TG+ T ED++ +++EDM Q ++ KE E D+++
Sbjct: 126 LIDTGLTEDPTILDEDVNPENVTDEDMAQIIEQLKEPSLPTEEDIEE 172
>AF067948-4|AAO25983.1| 756|Caenorhabditis elegans Egl-27 related
protein 1, isoform c protein.
Length = 756
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 462
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 463 LKMAKEAIANLERDLQKMDTK 525
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 462
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 463 LKMAKEAIANLERDLQKMDTK 525
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 462
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 463 LKMAKEAIANLERDLQKMDTK 525
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 27.5 bits (58), Expect = 7.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED---IDDHLMSEEDMKQS 462
++ E T +E+ ++ V K+ ++E G GR+++TE+ D + +D K+
Sbjct: 115 EASAETSETKVKEDTDD-VAEKMEEDEECPAPVGQGRTSSTEEPSASDAPAATAKDKKEE 173
Query: 463 LKMAKEAIANLERDLQKMDTK 525
K AKE NL+ + TK
Sbjct: 174 -KEAKENAKNLKETAEAEATK 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,792,330
Number of Sequences: 27780
Number of extensions: 214061
Number of successful extensions: 924
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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