Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b24
(603 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36105.1 68417.m05139 expressed protein 33 0.19
At1g44810.1 68414.m05133 expressed protein contains Pfam profil... 31 0.59
At3g28770.1 68416.m03591 expressed protein 31 0.78
At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1) i... 30 1.0
At1g22260.1 68414.m02782 expressed protein 30 1.0
At1g01690.1 68414.m00087 expressed protein 30 1.0
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal... 30 1.4
At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) simil... 30 1.4
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.4
At1g69070.1 68414.m07903 expressed protein 30 1.4
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 30 1.4
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 29 1.8
At3g62620.1 68416.m07034 sucrose-phosphatase-related contains we... 29 1.8
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 29 2.4
At1g20290.1 68414.m02533 hypothetical protein 29 2.4
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 3.1
At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative simil... 29 3.1
At1g18410.1 68414.m02299 kinesin motor protein-related similar t... 29 3.1
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 4.1
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 28 4.1
At2g22720.3 68415.m02692 expressed protein 28 4.1
At2g22720.2 68415.m02691 expressed protein 28 4.1
At2g22720.1 68415.m02693 expressed protein 28 4.1
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 28 4.1
At5g44900.1 68418.m05505 disease resistance protein (TIR class),... 28 5.5
At1g79150.1 68414.m09229 expressed protein ; expression supporte... 28 5.5
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ... 28 5.5
At5g60030.1 68418.m07527 expressed protein 27 7.2
At5g20610.1 68418.m02448 expressed protein 27 7.2
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 27 7.2
At1g68790.1 68414.m07863 expressed protein 27 7.2
At5g65290.1 68418.m08212 LMBR1 integral membrane family protein ... 27 9.6
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 27 9.6
At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing ... 27 9.6
At5g16180.1 68418.m01891 hypothetical protein contains Pfam doma... 27 9.6
At4g26990.1 68417.m03883 expressed protein 27 9.6
At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containi... 27 9.6
At1g70810.1 68414.m08168 C2 domain-containing protein similar to... 27 9.6
At1g35660.1 68414.m04432 expressed protein 27 9.6
At1g22275.1 68414.m02784 expressed protein 27 9.6
At1g08800.1 68414.m00979 expressed protein weak similarity to SP... 27 9.6
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 32.7 bits (71), Expect = 0.19
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Frame = +1
Query: 307 KRLTSSR-ENCNEKVKVKLCDEEAALTSTGM-GRSTTTEDIDDHLMSE-EDMKQSLKMAK 477
+R+T++ E C+ K KV +C+EE + + S E + +M+E E +K +L +
Sbjct: 109 RRVTAAESETCSHKEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALTASN 168
Query: 478 EAIANL----ERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
+ L R Q ++ + KS Q++ + +V+K
Sbjct: 169 NVLDTLLSSSRRHFQTIEARLVAKSTQLEGEKAQKEVQVQK 209
>At1g44810.1 68414.m05133 expressed protein contains Pfam profile:
PF04504 protein of unknown function, DUF573
Length = 296
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/65 (24%), Positives = 37/65 (56%)
Frame = +1
Query: 403 STTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEV 582
++++ED+D+ + S ED K+ + + + + E +L+ + T++ S + L++G+E
Sbjct: 15 ASSSEDVDEEISSGEDEKEHI--SNSSSSEEENELKDLSTQTL-NSPSTEAPTLDSGSET 71
Query: 583 RKDID 597
D D
Sbjct: 72 NSDSD 76
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 0.78
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +1
Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQK 513
G G S DI+ +L S+ED+K ++ AK A +++ L++
Sbjct: 337 GQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEE 377
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +1
Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 570
G G S I+ +L S+ED+K ++ AK +++ +L + + + +E +E
Sbjct: 279 GQGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENLGEAQGNNGVSTID-NEKEVEG 337
Query: 571 GAEVRKDIDV 600
E +D D+
Sbjct: 338 QGESIEDSDI 347
>At4g00930.1 68417.m00126 COP1-interacting protein 4.1 (CIP4.1)
identical to cDNA CIP4.1 mRNA for COP1-interacting
protein 4.1, GI:13160649
Length = 976
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 364 DEEAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKS 540
+ E + +G S ++ D +++ E + SL+ KEA NLE K KSS +S
Sbjct: 659 EAEENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKRS 714
Query: 541 AQMDEINLEAGAEV 582
+ D +N+ A+V
Sbjct: 715 KKKDSLNIVEEAQV 728
>At1g22260.1 68414.m02782 expressed protein
Length = 857
Score = 30.3 bits (65), Expect = 1.0
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Frame = +1
Query: 283 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE------ 444
L+R + ++ L S+ NEK+ V+L +++ +L S G +T D L SE
Sbjct: 347 LFRVAATKEALESAGNELNEKI-VELQNDKESLISQLSGLRCSTSQTIDKLESEAKGLVS 405
Query: 445 --EDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
D + ++ KE + L ++ + K S ++ + +E+ + K
Sbjct: 406 KHADAESAISQLKEEMETLLESVKTSEDKKQELSLKLSSLEMESKEKCEK 455
>At1g01690.1 68414.m00087 expressed protein
Length = 742
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 151 RERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRE 330
R+++S + E+D+ N + D + ++LH I++K H R +KRL ++
Sbjct: 389 RKKRSPQEEEVDNENNSSEDSRLMGAKNLHLFLSEIMRKL--KHAIRKEKPDKRLLGKKK 446
Query: 331 NCNEKVKVK 357
+ + + K
Sbjct: 447 SFEKSLSTK 455
>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha
catalytic subunit, putative similar to SP|O48653 DNA
polymerase alpha catalytic subunit (EC 2.7.7.7) {Oryza
sativa}; contains Pfam profiles: PF03175 DNA polymerase
type B, organellar and viral, PF00136 DNA polymerase
family B, PF03104 DNA polymerase family B, exonuclease
domain
Length = 1492
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQM-DEINLEAGAEVRKDID 597
+D+ LM EEDMK+S + E + L D+ K D + + ++ E+ ++ + ID
Sbjct: 239 MDNELMKEEDMKESEVIPSETMELLGSDIVKEDGSNKIRKTEVKSELGVKEVFTLNATID 298
Query: 598 V 600
+
Sbjct: 299 M 299
>At5g37190.1 68418.m04465 COP1-interacting protein 4 (CIP4) similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646; supporting cDNA
gi|13160645|dbj|AB036832.1|;
Length = 876
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 370 EAALTSTGMGRSTTTEDIDD-HLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQ 546
E + +G S ++ D +++ E + SL+ KEA NLE K KSS K+ +
Sbjct: 511 EENMEKSGKKSSKRSKKKDSLNIVEEAQVVDSLQQKKEAEENLE----KSGKKSSKKTKK 566
Query: 547 MDEINLEAGAEV 582
D +N+ A+V
Sbjct: 567 KDSLNIVEEAQV 578
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 1.4
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +1
Query: 133 FSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKR 312
F TV E K A HHL D+ S SL ++P ++ K L + +
Sbjct: 162 FDPHTVSELKQFADRFSAHHL----DEACSKYISLWKQRPDLIDMKYSNQLAGVDNVSLQ 217
Query: 313 LTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTED-IDDHLMSEEDMKQSLKMAKEAIA 489
S+R+ N + + ++ A TST T+D +D + + + + +++ +
Sbjct: 218 KDSTRQKQNAVNESEHQIQQCATTSTKRNEEEKTDDSLDVTSSTVKTTQHTRRLSVQDRI 277
Query: 490 NLERDLQKMDTKS 528
NL + QK ++ S
Sbjct: 278 NLFENKQKENSPS 290
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 29.9 bits (64), Expect = 1.4
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Frame = +1
Query: 244 KKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVK----LCDEEAALTSTG-MGRST 408
K + + K+IG + +K + S+ K+ K L D E + G +G S+
Sbjct: 84 KSSVFLDKRIGEQNDELGEFDKGIIRSQRQRQLKLAKKSMYNLSDGEEDVYEDGALGGSS 143
Query: 409 TTEDIDDHLMSEEDMK------QSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 570
+D D L+S+ED++ + K K N E D + + K M+EI +++
Sbjct: 144 VKDDFDSGLLSDEDLQDDDLEASASKRLKHLNRNREVDASGEEERRKSKKEVMEEIIMKS 203
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEK--VKVKLCDEEAALTSTGMGRSTTTED--IDDHLMSEEDMKQ 459
DSD+ + E+ N++ + D+ +L + T E +DD ++EE +K
Sbjct: 407 DSDDNGMVLDRGEDSNQEGMYDQEFEDDGKSLNLRDIDTETQNESEMVDDEDLTEEQIKD 466
Query: 460 SLKMAKEAIANLERDLQKMDT 522
+K KEA A+ E +++T
Sbjct: 467 EIKKIKEAYADDEEFPDEVET 487
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL-- 465
D + +R + ++ E++KV+ E R +I++ L E++K +L
Sbjct: 719 DRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEE-LKKLENLKVALDD 777
Query: 466 -KMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAG 573
MAK ++NLER +K+ ++ DE++L+ G
Sbjct: 778 MSMAKMQLSNLERSWEKVSALKQKVVSRDDELDLQNG 814
>At3g62620.1 68416.m07034 sucrose-phosphatase-related contains weak
similarity to sucrose-phosphatase [Arabidopsis thaliana]
gi|11127757|gb|AAG31075
Length = 358
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/69 (24%), Positives = 36/69 (52%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
DS E+ ++ +N ++ L EEA+ GM ++ ED+D L+ + + + L++
Sbjct: 281 DSILEELNDATVDNSQWTAEIVLEAEEASKNQMGMRITSCLEDLDKQLLMQRILGKDLEV 340
Query: 472 AKEAIANLE 498
++ +LE
Sbjct: 341 LLHSVMHLE 349
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/102 (19%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +1
Query: 262 KKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDI--DDHL 435
KK + Y + E++++ ++ +E + E R+T D D +
Sbjct: 732 KKALAYEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCKAAEIEAKRATELADKARTDAV 791
Query: 436 MSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEIN 561
S+++ +S ++A E +A +ER ++++ K+ DE++
Sbjct: 792 TSQKEKSESQRLAMERLAQIERAERQVENLERQKTDLEDELD 833
>At1g20290.1 68414.m02533 hypothetical protein
Length = 382
Score = 29.1 bits (62), Expect = 2.4
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Frame = +1
Query: 97 EHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQ-NVDDGISNGRSLHAKKPIIVKKKI 273
EH D FK + +S E K A A H LNQ N D SN + +IV KKI
Sbjct: 95 EH-DQFKWKHV-YSHIGSAEEKDGAVAIWLHSLNQRNYPDLRSNECK---RNEVIVYKKI 149
Query: 274 GYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTG--MGRSTTTED 420
G + EEK + +EN N ++ + D+ TS G M TT E+
Sbjct: 150 GEASEENIHEEK--ITVKENTNGNAELFVVDKVNDETSEGTIMEERTTLEE 198
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +1
Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSA 543
D EAAL + + R D + L+S+ K L AKE + E+ + + K
Sbjct: 113 DLEAALVAL-LKREEDLHDAERKLLSD---KNKLNRAKEELEKREKTISEASLKHESLQE 168
Query: 544 QMDEINLEAGAEVRK 588
++ N+E ++ R+
Sbjct: 169 ELKRANVELASQARE 183
>At2g31250.1 68415.m03816 glutamyl-tRNA reductase, putative similar
to HEMA2 [SP|P49294], HEMA1 [SP|P42804]
Length = 524
Score = 28.7 bits (61), Expect = 3.1
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Frame = +1
Query: 58 VIYTIIAA--PAQLGEHLDTFKTLNGDFS----DTTVRERKSTAQAELDHHLNQNVDD-- 213
VI+T ++ P L EH++ D++ D +V + AELD NVDD
Sbjct: 329 VIFTSTSSETPLFLKEHVEILPPCPADYARLFVDISVPRNVGSCVAELDSARVYNVDDLK 388
Query: 214 -GISNGRSLHAKK-----PIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEA 375
++ + A+K PII ++ I + +RDS + + E+++ + ++
Sbjct: 389 EVVAANKEDRARKSMEALPIIREETIEFEGWRDSLQTFPTIRKLRSKTERIRAECVEKLI 448
Query: 376 ALTSTGMGRST 408
+ GM + T
Sbjct: 449 SKHGNGMDKKT 459
>At1g18410.1 68414.m02299 kinesin motor protein-related similar to
kinesin-related protein GB:AAF24855 GI:6692749 from
[Arabidopsis thaliana]
Length = 1140
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +1
Query: 412 TEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 555
T I+D + E M++ +A++A+ R+L+KM ++ ++E
Sbjct: 391 TAGIEDRVKELEQMRKDASVARKALEERVRELEKMGKEADAVKMNLEE 438
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +1
Query: 292 DSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKM 471
DSD+E S ++ E+ +++ E ++ +S + ID+ QSLK+
Sbjct: 437 DSDDESDSNSEKDQEEEQSQLEKARESSSSSSDS---GSERRSIDE----TNATAQSLKI 489
Query: 472 AKEAIANLERDLQKMDTKSSPKS 540
+ ++ E D +K+ +KSS KS
Sbjct: 490 SYSNYSSEEEDNEKLSSKSSCKS 512
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Frame = +1
Query: 106 DTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHL 285
D+ + D V+++ +T + + + ++ S+ AKKP +VK
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKN--AKPA 293
Query: 286 YRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSL 465
+DS + + E+ +EK K + + T S++ E D+ +E+ K
Sbjct: 294 AKDSSSSEEDSDEEESDDEKPPTK---KAKVSSKTSKQESSSDESSDE--SDKEESKDEK 348
Query: 466 KMAKEAIANLER-DLQKMDTKSSPKS 540
K+ +++E D ++ PK+
Sbjct: 349 VTPKKKDSDVEMVDAEQKSNAKQPKT 374
>At2g22720.3 68415.m02692 expressed protein
Length = 569
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 356 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 405
>At2g22720.2 68415.m02691 expressed protein
Length = 672
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 459 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 508
>At2g22720.1 68415.m02693 expressed protein
Length = 340
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = +1
Query: 124 NGDFSDTTVRERKSTAQAELDHHLNQNVDDGISNGRSLHAKKPIIVKKKI 273
NG + + R + A+ +DH + +G+ GRS +P+ K +
Sbjct: 127 NGQLNSRSDSRRSAPAKVPVDHRKQMSSSNGVGPGRSATNARPLPSKSSL 176
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 355 KLCDEEAALTSTGMGRSTTTEDIDDHLMSEED----MKQSLKMAKEAIANLERDLQKMDT 522
K+ E ALTS T + ++D L + ED + + + + A N E +LQK
Sbjct: 861 KVKSEVDALTSKLAETQTALKLVEDALSTAEDNISRLTEENRNVQAAKENAELELQKAVA 920
Query: 523 KSSPKSAQMDEI 558
+S ++++DE+
Sbjct: 921 DASSVASELDEV 932
>At5g44900.1 68418.m05505 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 274
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +1
Query: 175 AELDHHLNQNVDDGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKV 354
A L ++N +DD GR L I + ++ ++ K T+SR +E K+
Sbjct: 40 ALLKENVNVFIDDHELRGRDLDHLFSRIEESRVALTIF-----SKNFTNSRWCLDELAKI 94
Query: 355 KLCDEEAALTSTGMGRSTTTEDI 423
K C ++ +LT + T+D+
Sbjct: 95 KECVDQESLTVIPIFFKMKTDDV 117
>At1g79150.1 68414.m09229 expressed protein ; expression supported
by MPSS
Length = 495
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 424 DDHLMSEEDMKQSLKMAKEAIANLERDLQK---MDTKSSPKSAQMDEINLEAGAE 579
D+H++++ ++ K +K E+DL + + +P++A + E+ E AE
Sbjct: 130 DEHVLNKSQRREKAKKSKREAKKHEKDLPDEILQEEEETPQAAVLAEVKEELSAE 184
>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
similarity to NAD kinase [Homo sapiens]
gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
ATP-NAD kinase
Length = 985
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +1
Query: 247 KPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID 426
K +++ KK+G L ++ E +EN N V+ ++ D A + G ++ +D
Sbjct: 678 KTVLLLKKLGQELMEEAKEAASFLYHQENMNVLVEPEVHDVFARIPGFGFVQTFYIQDTS 737
Query: 427 D 429
D
Sbjct: 738 D 738
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +1
Query: 289 RDSDEEKRLTSSRENC-NEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSE-EDMKQS 462
R +++K+ + E+ +EKVK KL DE+ + + + ++ D+ ++ E E ++
Sbjct: 149 RKKEKKKKKNNKDEDVVDEKVKEKLEDEQKSADRKERKKKKSKKNNDEDVVDEKEKLEDE 208
Query: 463 LKMAKEAIANLERDLQKMDTKSSPK 537
K A+ +D +D K K
Sbjct: 209 QKSAEIKEKKKNKDEDVVDEKEKEK 233
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 364 DEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDL 507
D E+AL S M +T +ED +D + K + KE + + RD+
Sbjct: 503 DLESALKSVEMLEATASEDEEDRKKHGDKDKYFITPMKETVPSCSRDV 550
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/116 (17%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Frame = +1
Query: 259 VKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLM 438
++++ H+ + D+ +RLT E+ +K+++K + G R +ED++
Sbjct: 168 IQERTMRHIQKIVDDHERLTKLLESEKKKLEIKGNELAKPQVHNGTERMKLSEDLEQR-Q 226
Query: 439 SEEDMKQSLKMAK--EAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKDIDV 600
EE ++ +++ + + + +E +++++ + + M + + A+V K++D+
Sbjct: 227 KEELHEKIIRLERQIDQVQAIELEVEQLKGQLN----VMKHMASDGDAQVVKEVDI 278
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 27.5 bits (58), Expect = 7.2
Identities = 23/78 (29%), Positives = 40/78 (51%)
Frame = +1
Query: 355 KLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSP 534
KL EAAL G +D+D L + ++ +++LK A+E ++E + + ++ K
Sbjct: 402 KLAKREAALEKKEEGVKKKEKDLDARLKTVKEKEKALK-AEEKKLHMENE-RLLEDKECL 459
Query: 535 KSAQMDEINLEAGAEVRK 588
+ + DEI E G E K
Sbjct: 460 RKLK-DEIE-EIGTETTK 475
>At5g65290.1 68418.m08212 LMBR1 integral membrane family protein
contains Pfam PF04791: LMBR1-like conserved region
Length = 733
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 439 SEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDE 555
S++DM + A+EAI N +++ K SP S E
Sbjct: 592 SKDDMSRKYGSAREAITNKYAAIREQQNKHSPSSMTKPE 630
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/101 (21%), Positives = 42/101 (41%)
Frame = +1
Query: 289 RDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLK 468
R S + ++ + N++ V E TS + + +D +S ED +
Sbjct: 539 RVSKKSRKARKKKPKGNKEATVHKLSENHPSTSNEASTAKSIPMVDS-TVSTEDGPMDVP 597
Query: 469 MAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRKD 591
K +NLE + + SPKS + + +L +G++ D
Sbjct: 598 PNKPEASNLETETDETQQMHSPKSNNVVD-DLSSGSDDSSD 637
>At5g46870.1 68418.m05775 RNA recognition motif (RRM)-containing
protein similar to unknown protein (pir||C71447)
Length = 295
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 349 KVKLCDEEAALTSTGMGRSTTTEDIDDHLMSEEDMKQSLKMAKEAIANLERDLQKMD-TK 525
K K DE+ LTST R T+ D + E + + E + +++ Q + TK
Sbjct: 133 KAKSLDEKHQLTSTASARVTS---FDKRIGFTEKINTGTTVVSEKVKEVDQKFQVTEKTK 189
Query: 526 SSPKSAQMDEINLEAGAEVRKD 591
S+ +A+ N AG+ + K+
Sbjct: 190 SAIAAAEQTVSN--AGSAIMKN 209
>At5g16180.1 68418.m01891 hypothetical protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 718
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/47 (21%), Positives = 27/47 (57%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEIN 561
+++ + ++S K+A+ + R+++K+D S + QMD+++
Sbjct: 112 VEEKTFKALNRRESGVRGKKAMKKIVRNVEKLDEDSDSEETQMDDLS 158
>At4g26990.1 68417.m03883 expressed protein
Length = 474
Score = 27.1 bits (57), Expect = 9.6
Identities = 36/178 (20%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Frame = +1
Query: 31 METLIVLFAVIYTIIAAPAQLGEHLDTFKTLNGDFSDTTVRERKSTAQAELDHHLNQNVD 210
++TL++L + I IIA L ++ T G ++T E + A + + Q
Sbjct: 83 VDTLVILSSTIVQIIAEGVSLPSNVTTANNEVGSATETLPSEPRLCAANKSTNVSTQG-- 140
Query: 211 DGISNGRSLHAKKPIIVKKKIGY-HLY-RDSDEEKRLTSSRENCNEKVK-VKLCDEEAAL 381
G ++ R A+ I+K+ + +Y +D+ + + +SS ++ +E+VK ++ +
Sbjct: 141 RGFNHKRQAGAQ---ILKRSVQIPEVYQQDNIDIQSSSSSLDSMSERVKPIEEDNLMPEP 197
Query: 382 TSTGMGRSTTTEDIDDHLMSEE-DMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMD 552
S G + D+L+SE + +L++ + +A + PK +++
Sbjct: 198 LSNGFHNAAAKPSSTDNLLSESTPVDDTLELCRGRVAASSTASVPIQAVKKPKEFKLN 255
>At2g16880.1 68415.m01942 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 743
Score = 27.1 bits (57), Expect = 9.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 421 IDDHLMSEEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEA 570
++D +SE D + LK +++RDLQ K+ S +E+N EA
Sbjct: 671 MEDGKLSETD--ELLKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEA 718
>At1g70810.1 68414.m08168 C2 domain-containing protein similar to
zinc finger and C2 domain protein GI:9957238 from
[Arabidopsis thaliana]
Length = 165
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 247 KPIIVKKKIGYHLYRDSDEEKRLTSSRENC 336
KP + K+G D E KR+ +RENC
Sbjct: 91 KPFLEVHKMGLQELPDGTEIKRVVPNRENC 120
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 27.1 bits (57), Expect = 9.6
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 283 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEA--ALTSTGMGRSTTT--ED--IDDHLMSE 444
L +SDEE LT +VK+ +EEA +T T T ED +DH +S
Sbjct: 385 LILNSDEESDLTFESNGVQREVKITDLEEEALDPVTIADHENETVTFSEDKFTEDHSVSN 444
Query: 445 EDMKQSLKMAKEAIANLERDLQKMDTKSS 531
S++ EA +L ++L D+ S
Sbjct: 445 IVPLVSVRPKLEANVSLCKELLHSDSPDS 473
>At1g22275.1 68414.m02784 expressed protein
Length = 856
Score = 27.1 bits (57), Expect = 9.6
Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Frame = +1
Query: 283 LYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTSTGMGRSTTTEDID-------DHLMS 441
L+R + E++ L SS +EK+ D+E+ ++ R + ++ ID ++
Sbjct: 347 LFRVAAEKEALESSGNELSEKIVELQNDKESLISQLSGVRCSASQTIDKLEFEAKGLVLK 406
Query: 442 EEDMKQSLKMAKEAIANLERDLQKMDTKSSPKSAQMDEINLEAGAEVRK 588
+ + + KE I L ++ + K S ++ + +E+ + K
Sbjct: 407 NAETESVISKLKEEIDTLLESVRTSEDKKKELSIKLSSLEIESKDKYEK 455
>At1g08800.1 68414.m00979 expressed protein weak similarity to
SP|Q02455 Myosin-like protein MLP1 {Saccharomyces
cerevisiae}; contains Pfam profile PF04576: Protein of
unknown function, DUF593
Length = 1113
Score = 27.1 bits (57), Expect = 9.6
Identities = 23/115 (20%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = +1
Query: 211 DGISNGRSLHAKKPIIVKKKIGYHLYRDSDEEKRLTSSRENCNEKVKVKLCDEEAALTST 390
+G S G L K+ + +K+ LY++ +EE+ ++ N + +L +E+A+
Sbjct: 885 EGESEGDRL--KRQVDYDRKLLTGLYKELEEERSASAVATNQAMAMITRLQEEKASFQME 942
Query: 391 GMGRSTTTEDIDDHLMSEEDMKQSLKMAKE-AIANLERDLQKMDTKSSPKSAQMD 552
+ E+ ++ M L + +E I +LE +++ ++ K ++D
Sbjct: 943 ALQNLRMMEEQAEYDMEAIQRLNDLLVEREKLIQDLEAEIEYFRDQTPQKKNKLD 997
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,958,788
Number of Sequences: 28952
Number of extensions: 192906
Number of successful extensions: 780
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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