Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b19
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.3  
AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor p...    23   7.5  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   10.0 

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 32  ASPP*TVHASGSSTLVPTRRT 94
           ASPP  +H  GS T    +RT
Sbjct: 879 ASPPAAIHGGGSRTTTVLKRT 899


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 154 CGKSVYAAEERVAGGLKWHKMCFKCGLCQKLLDSTNCSEHEGEL 285
           C KS+Y A E  AG   +H +     +  ++L   N  +  GE+
Sbjct: 543 CDKSIYTAVEVTAGNRLFHHIVESDRVGTQILKEMNKQKLPGEV 586


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 227 HLKHILCHLRPPATRSSAA*TDLPHFGHFGL 135
           HL      + P +  SS   TDLPH  H+ L
Sbjct: 477 HLSRHASSILPSSLVSSPDGTDLPHHTHYQL 507


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -3

Query: 227 HLKHILCHLRPPATRSSAA*TDLPHFGHFGL 135
           HL      + P +  SS   TDLPH  H+ L
Sbjct: 453 HLSRHASSILPSSLVSSPDGTDLPHHTHYQL 483


>AY994091-1|AAX86004.1|   83|Anopheles gambiae hyp6.3 precursor
           protein.
          Length = 83

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = +3

Query: 165 SLRR*GARGWWPQMAQNVLQMWSV 236
           ++++ G RG+WP M ++V ++ ++
Sbjct: 53  AVQKMGGRGFWPIMMKSVKKIMAI 76


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 160 KSVYAAEERVAGGLKWHKMCF 222
           ++V A ++  AGGL W K  F
Sbjct: 522 ETVQANDDLPAGGLAWEKSTF 542


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,282
Number of Sequences: 2352
Number of extensions: 10644
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)