Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b14
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.8  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.0  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   5.0  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   5.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 353 NPHSQHEG*TLYVMVCSELLS 291
           NPH QH     +VM  S++LS
Sbjct: 620 NPHQQHLDAWYWVMDWSDMLS 640


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 151 SKVISKNIKQRHCG*IEG*FR*TDFFYIV 65
           SK+++KNIK+ + G  E   +  D FY++
Sbjct: 355 SKLVAKNIKEFYYGNEEPTDKNKDKFYLL 383


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 151 SKVISKNIKQRHCG*IEG*FR*TDFFYIV 65
           SK+++KNIK+ + G  E   +  D FY++
Sbjct: 355 SKLVAKNIKEFYYGNEEPTDKNKDKFYLL 383


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 151 SKVISKNIKQRHCG*IEG*FR*TDFFYIV 65
           SK+++KNIK+ + G  E   +  D FY++
Sbjct: 355 SKLVAKNIKEFYYGNEEPTDKNKDKFYLL 383


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 151 SKVISKNIKQRHCG*IEG*FR*TDFFYIV 65
           SK+++KNIK+ + G  E   +  D FY++
Sbjct: 355 SKLVAKNIKEFYYGNEEPTDKNKDKFYLL 383


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 151 SKVISKNIKQRHCG*IEG*FR*TDFFYIV 65
           SK+++KNIK+ + G  E   +  D FY++
Sbjct: 354 SKLVAKNIKEFYYGNEEPTDKNKDKFYLL 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,715
Number of Sequences: 336
Number of extensions: 2864
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)