Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b14
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p pro...    29   7.1  
AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p pro...    29   7.1  
AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA...    29   7.1  

>BT025042-1|ABE73213.1| 2313|Drosophila melanogaster LD27386p protein.
          Length = 2313

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = +2

Query: 167  NVSRQPLHNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQ-----STPSRKVFT 331
            N+ R    + ++     SAG  KP++  KK   ++S +    K ++     STP+R+V  
Sbjct: 937  NLERNSSPSSDSAQANTSAGKLKPSKVKKKINPRRSTICEAAKDLRSSSSSSTPTREVAA 996

Query: 332  PRAVNVGSLIYTDEDGDKGCT 394
               V+  S   +  +G K  T
Sbjct: 997  SSPVSTSSDSSSKRNGSKRTT 1017


>AY050232-1|AAK84931.1| 1443|Drosophila melanogaster SD01656p
           protein.
          Length = 1443

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = +2

Query: 167 NVSRQPLHNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQ-----STPSRKVFT 331
           N+ R    + ++     SAG  KP++  KK   ++S +    K ++     STP+R+V  
Sbjct: 67  NLERNSSPSSDSAQANTSAGKLKPSKVKKKINPRRSTICEAAKDLRSSSSSSTPTREVAA 126

Query: 332 PRAVNVGSLIYTDEDGDKGCT 394
              V+  S   +  +G K  T
Sbjct: 127 SSPVSTSSDSSSKRNGSKRTT 147


>AE014298-1909|AAF48273.2| 2362|Drosophila melanogaster CG1716-PA
            protein.
          Length = 2362

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = +2

Query: 167  NVSRQPLHNIENMGKVVSAGPTKPNEPTKKGETKKSFLSNTGKAIQ-----STPSRKVFT 331
            N+ R    + ++     SAG  KP++  KK   ++S +    K ++     STP+R+V  
Sbjct: 986  NLERNSSPSSDSAQANTSAGKLKPSKVKKKINPRRSTICEAAKDLRSSSSSSTPTREVAA 1045

Query: 332  PRAVNVGSLIYTDEDGDKGCT 394
               V+  S   +  +G K  T
Sbjct: 1046 SSPVSTSSDSSSKRNGSKRTT 1066


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,642,717
Number of Sequences: 53049
Number of extensions: 506323
Number of successful extensions: 1354
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)