Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b11
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 361 AVVYISKFLYVACEIL 314
           A+VY S  ++V CE+L
Sbjct: 412 ALVYCSLAIFVLCELL 427


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 509 TIFIGAKNIPRPQLTFKDTIDNSEN 583
           ++F+   ++     T+K T++NS N
Sbjct: 469 SVFVRFTHLQNQDFTYKITVNNSGN 493


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 592 HPQILRIINCILESK 548
           HP I+ +I C+ E +
Sbjct: 510 HPYIVSLIGCVTEGR 524


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,052
Number of Sequences: 336
Number of extensions: 2511
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)