Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b11
(593 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 32 0.055
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.51
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.68
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 27 1.6
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 27 1.6
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 26 3.6
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 26 3.6
SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subuni... 26 4.8
SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual 26 4.8
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 25 6.3
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 25 8.3
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 25 8.3
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.3
>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 32.3 bits (70), Expect = 0.055
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 197 DLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVK 304
DLFKT+ E+ + ++ QN Q N LIG E ++
Sbjct: 60 DLFKTFDEYVNEARRLKQNYGDQINILIGAETEYIR 95
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 0.51
Identities = 28/122 (22%), Positives = 41/122 (33%)
Frame = +2
Query: 176 LPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVN 355
+P S F+T PE E +N Q ++ L ++E D N
Sbjct: 258 IPSSFEESSFQTIPEDFEPQVHDHENQTQLNHHLDNNSS------ISSHNPSLETANDGN 311
Query: 356 DSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNI 535
+ N + T +N P A S N N H ++ GS I I +
Sbjct: 312 QETVSSSNSNYSTTRVDNDPHVASYSPQNSNFDHQAAATTNDAHQNVVRGSAITIAPTPV 371
Query: 536 PR 541
PR
Sbjct: 372 PR 373
>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 190
Score = 28.7 bits (61), Expect = 0.68
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +2
Query: 218 EFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDTV 397
+F +N N+ S E P +K C FTS+I D N + D + + T
Sbjct: 14 DFPTTTNFFLTNILSMSVVFRTVEDPELKSICTTFTSSISAEFDSNTLVCDLVETDLFTE 73
Query: 398 SG 403
G
Sbjct: 74 EG 75
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 128 QEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISN 238
+EG VNK +K S++ SSS D + P+F + N
Sbjct: 21 EEGTWEVNKLMKFSSEEGRSSSDDYMFSSPDFEKAGN 57
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 374 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKP 481
+N S+D +S + PS F + + SH SSP+ P
Sbjct: 314 LNPSVDLLSNHSTPSFIFENSPSAEFSHQSSPYLVP 349
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/68 (25%), Positives = 31/68 (45%)
Frame = +2
Query: 107 PHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGT 286
P+ A + R++ K + S + +SSS ++ K YP ++ + ++ NE G
Sbjct: 95 PYRARFDEVAQRNLRKLLGDSALINLSSSEEIRKKYPSLFS-NSPLRSDMQAVVNEHAGY 153
Query: 287 EQPAVKLK 310
A LK
Sbjct: 154 ANSAASLK 161
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 26.2 bits (55), Expect = 3.6
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = -3
Query: 378 LILSNKLSFTSASFSMLLVKSSHFSFTAGC-SVPISSFDC*ATFWLI*FEISLNSGYVLN 202
LIL + L+F +L KS +S T C S+ + SF F L F S +
Sbjct: 252 LILYDTLTFV---VHLLSQKSLPYSLTTFCASILVLSF-----FQLPLFADHFLSALDVK 303
Query: 201 KSYEELIGS*FDDFIVLLTLLY 136
K Y + +GS FD+ I++++ Y
Sbjct: 304 KKYIDALGSSFDEKIMIISHKY 325
>SPBC27B12.01c |mmm1|SPBC30B4.09c|Mdm10/Mdm12/Mmm1 complex subunit
Mmm1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 344 ADVNDSLLDRINISIDTVSGENLPSEAFAS 433
A++ SL D IN ++DT N P AFA+
Sbjct: 170 AEMLVSLTDNINCTVDTKLLLNFPKPAFAT 199
>SPAC20H4.05c |||adducin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 221
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 281 GTEQPAVKLKCEDFTSNIEKLADVNDSLLDRINISIDT 394
G +P K+K F +N +D++DSL + IN+ DT
Sbjct: 141 GFHKPTDKIKIP-FINNTAHESDLHDSLQEAINLYPDT 177
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +2
Query: 425 FASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNI 535
F + LN N S N S W+ ++E + + +++ ++
Sbjct: 292 FVADLNSNASSNFSLWHNEPLAEPVVQNVLWVNTSSV 328
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 25.0 bits (52), Expect = 8.3
Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 3/128 (2%)
Frame = +2
Query: 140 RSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCED 319
R + + Q S S + E N ++Q + Q + +Q +L +
Sbjct: 13 RKLAMQAEDMQQHQKSQSNQIASCLAEMNTKQEVVNQTIGQLGRSISEVQQQNSQLVLQS 72
Query: 320 FTS---NIEKLADVNDSLLDRINISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVIS 490
+++++A RIN T+S NL EA N N + ++ I
Sbjct: 73 LNQINMSMQQVALGIQDYASRINKLEQTMSDMNLKFEALQKEQNSNTKTLADCTSQMTII 132
Query: 491 EKKMGSTI 514
KK+ + +
Sbjct: 133 TKKLDAEL 140
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 8.3
Identities = 19/93 (20%), Positives = 39/93 (41%)
Frame = +2
Query: 107 PHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGT 286
PH+ +N + +SNQ P +S + ++ + Q ++ A+ S G
Sbjct: 46 PHVDDQRSSLLSLLNAGLNASNQSPSNSGPKYYASHSSSTDALLQAFRDGAKPSGTASGA 105
Query: 287 EQPAVKLKCEDFTSNIEKLADVNDSLLDRINIS 385
+ + + TSN V+ + L+R+ +S
Sbjct: 106 DVKRSDSESTEATSNERPFNPVSAANLERLLMS 138
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 65 KMNSALNPDAPEFYP 109
K ALNP APEF P
Sbjct: 1334 KQKVALNPSAPEFVP 1348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,304,573
Number of Sequences: 5004
Number of extensions: 45703
Number of successful extensions: 179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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