Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b11
         (593 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    28   0.20 
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   4.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   7.4  
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    23   9.8  
AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding pr...    23   9.8  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.3 bits (60), Expect = 0.20
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +2

Query: 137 YRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQ-ISQNVAQQSNELIGTEQPAVKLKC 313
           Y  +  T  +S +L          T    N+IS + I  +VA+ + EL+G E     L C
Sbjct: 548 YSVITDTDTTSKKLLQKGQLQTRTTMIPLNKISGRKIDPSVARFAEELVGKENVTTALSC 607

Query: 314 EDFTSNIEK 340
             +   +++
Sbjct: 608 ISYDPEVDQ 616


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 16/74 (21%), Positives = 30/74 (40%)
 Frame = +2

Query: 71  NSALNPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQ 250
           +++L   A  F   L   +     S++ + ++S+    SSS       P    +  Q  Q
Sbjct: 19  SASLRSSAANFAAWLRGNSGSPLSSISSSSRNSSSCNNSSSSGTHSDRPVAGMLQQQQQQ 78

Query: 251 NVAQQSNELIGTEQ 292
               Q   ++GT+Q
Sbjct: 79  QRQPQRQAVVGTQQ 92


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 107 PHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKT 211
           P  AA    G RSV     +SN + ++SSY  +++
Sbjct: 494 PPPAASPAFGDRSVRAVSSASNSVSVNSSYSSYQS 528


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -2

Query: 154 LVNTSISFLCDCRQVWIKLRCIWIKRGVHFD 62
           L + +   + DC +V   +RC  ++ G++ D
Sbjct: 150 LTSLTKGIITDCPEVQCLIRCAAVRTGLYTD 180


>AY146743-1|AAO12103.1|  192|Anopheles gambiae odorant-binding
           protein AgamOBP11 protein.
          Length = 192

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -2

Query: 100 LRCIWIKRGVHFDTQIKEVNRN 35
           LRC+ IK GV+ D +  +++R+
Sbjct: 96  LRCVAIKLGVYCDEKGADLDRH 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 558,291
Number of Sequences: 2352
Number of extensions: 10090
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)