Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b11
(593 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar pr... 60 6e-09
L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein. 60 6e-09
BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10 pr... 60 6e-09
BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10 pr... 60 6e-09
AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10 pr... 60 6e-09
AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10 pr... 60 6e-09
AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen prot... 60 6e-09
AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10 is... 60 6e-09
BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein. 34 0.44
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 34 0.44
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot... 34 0.44
AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein. 33 0.76
U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open read... 32 1.8
BC113950-1|AAI13951.1| 1655|Homo sapiens phospholipase C, eta 1 ... 31 3.1
AK022610-1|BAB14129.1| 466|Homo sapiens protein ( Homo sapiens ... 31 3.1
>X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar
protein protein.
Length = 885
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein.
Length = 860
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10
protein.
Length = 860
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen
protein.
Length = 860
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 29 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 88
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 89 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 148
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 149 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 194
>AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10
isoform 2 variant protein.
Length = 431
Score = 60.1 bits (139), Expect = 6e-09
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 8/166 (4%)
Frame = +2
Query: 104 YPHLAAVTQEGYRSVNKTIKSSNQLPM-SSSYDLFKTYPEFNEISNQISQNVAQQSNELI 280
+P + + SV K+S LP YD ++++P F + Q + ++
Sbjct: 28 FPDADSFVKFALGSVVAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVM 87
Query: 281 GTEQPAVKLKCEDFTSNIEK----LADVNDSLLDRINISIDTVSGENLPSEAFASGLNDN 448
+K + +E L D ND +L+R+ I +D SG N +
Sbjct: 88 QYHGCRSNIKDRSKVTELEDKFDLLVDANDVILERVGILLDEASGVNKNQQPVLPAGLQV 147
Query: 449 PSHNSSPWNKPVISE-KKMGSTIF--IGAKNIPRPQLTFKDTIDNS 577
P S WN+ KK S F + AKNI RPQL F++ IDNS
Sbjct: 148 PKTVVSSWNRKAAEYGKKAKSETFRLLHAKNIIRPQLKFREKIDNS 193
>BC017667-1|AAH17667.1| 683|Homo sapiens NAV3 protein protein.
Length = 683
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 389 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQ 547
D E+ E F SGLN S NSSP P ++ K GS K++ +P+
Sbjct: 414 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPK 466
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 389 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQ 547
D E+ E F SGLN S NSSP P ++ K GS K++ +P+
Sbjct: 414 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPK 466
>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3
protein.
Length = 2282
Score = 33.9 bits (74), Expect = 0.44
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +2
Query: 389 DTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIPRPQ 547
D E+ E F SGLN S NSSP P ++ K GS K++ +P+
Sbjct: 333 DDAFSESGEMEGFNSGLNSGGSTNSSPKVSPKLAPPKAGSKNLSNKKSLLQPK 385
>AB023230-1|BAA76857.1| 1062|Homo sapiens KIAA1013 protein protein.
Length = 1062
Score = 33.1 bits (72), Expect = 0.76
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 2 SSLNKGCRRILISVHFFYLRIKMNSALNPDAPEFYPHLAAVTQEGYRSVNK--TIKSSNQ 175
SSL K + IS H FYL K + A P A +T+ G + +K T+++ +Q
Sbjct: 368 SSLIKSIWVMAISQHQFYLDRKQSKAKIPSARSLDEIAMDLTETGTQRASKLVTLEAKSQ 427
Query: 176 LPMSSSYDLFKTYPEFNEISNQ 241
M+S+ L + + +E+S +
Sbjct: 428 FIMASNGSLISSGSQDSEVSEE 449
>U80761-1|AAB91452.1| 124|Homo sapiens CTG26 alternate open reading
frame protein.
Length = 124
Score = 31.9 bits (69), Expect = 1.8
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 441 LRPL-ANASLGKFSPLTVSMLILILSNKLSFTSASFSMLLVKSSHFSFTAGCSVPISSFD 265
LRPL A AS S VS + + + LSF+++ FS S FSF++ S +
Sbjct: 42 LRPLEATASFSSLSSPEVSSVFSLRRSSLSFSTSGFSSSFSASFSFSFSSFSSWLLRGMG 101
Query: 264 C 262
C
Sbjct: 102 C 102
>BC113950-1|AAI13951.1| 1655|Homo sapiens phospholipase C, eta 1
protein.
Length = 1655
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 374 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIP 538
++I+I+ + G+N + N NP H+SS N + ++ +G I + P
Sbjct: 833 VHITINEIYGKNRQLQGLKGLFNKNPRHSSSENNSHYVRKRSIGDRILRRTASAP 887
>AK022610-1|BAB14129.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ12548 fis, clone NT2RM4000657, weakly similar to
1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE
PHOSPHODIESTERASE DELTA ).
Length = 466
Score = 31.1 bits (67), Expect = 3.1
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 374 INISIDTVSGENLPSEAFASGLNDNPSHNSSPWNKPVISEKKMGSTIFIGAKNIP 538
++I+I+ + G+N + N NP H+SS N + ++ +G I + P
Sbjct: 303 VHITINEIYGKNRQLQGLKGLFNKNPRHSSSENNSHYVRKRSIGDRILRRTASAP 357
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,255,543
Number of Sequences: 237096
Number of extensions: 1558065
Number of successful extensions: 7235
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7234
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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