Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b11
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 33 0.12
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 33 0.12
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 31 0.47
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 31 0.62
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 31 0.62
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 31 0.62
AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical ... 31 0.62
U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical pr... 28 5.8
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +2
Query: 128 QEGYRSVNKTIKSSNQLPMSSS---YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPA 298
++G + V TI + L M S D + T PE +I NV N + G+
Sbjct: 862 RDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQ 920
Query: 299 VKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPS 418
+ E + +N+EKL +L+ N D + + LP+
Sbjct: 921 MTRMMEQYANNLEKLVAERTGMLEEANQRADRLLSQLLPA 960
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = +2
Query: 128 QEGYRSVNKTIKSSNQLPMSSS---YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPA 298
++G + V TI + L M S D + T PE +I NV N + G+
Sbjct: 808 RDGSKVVKPTIPQNKVLNMDLSALIQDCWNTTPEMRPSLRRIKLNVETYLN-IKGSLVDQ 866
Query: 299 VKLKCEDFTSNIEKLADVNDSLLDRINISIDTVSGENLPS 418
+ E + +N+EKL +L+ N D + + LP+
Sbjct: 867 MTRMMEQYANNLEKLVAERTGMLEEANQRADRLLSQLLPA 906
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +2
Query: 149 NKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTS 328
+KT +++ MS + L K E + +Q +N+ NE+ + + K +D T
Sbjct: 291 SKTTVAADVAKMSGA--LQKAEEEVVQTIDQTVKNIKSNVNEVKKDVEKNIAEKVDDITK 348
Query: 329 NIEKLADVNDSLLDRINISIDTVS 400
+EK A + D+I ID S
Sbjct: 349 ELEKSAKSLEETTDKIGSKIDNTS 372
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 158 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 334
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 335 E 337
E
Sbjct: 102 E 102
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 158 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 334
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 335 E 337
E
Sbjct: 102 E 102
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 158 IKSSNQLPMSSS-YDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNI 334
++ SN LP + + Y+L+ +YP FN + Q + N++ T+ ++ D S++
Sbjct: 44 VRESNGLPKAGADYELYNSYPTFNTFMKRSEQRLNALMNKV--TKSIGCAMRVPDVGSSV 101
Query: 335 E 337
E
Sbjct: 102 E 102
>AF099919-7|AAC68795.1| 156|Caenorhabditis elegans Hypothetical
protein F40G9.6 protein.
Length = 156
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 254 VAQQSNELIGTEQPAVKLKCEDFTSNIEK-LADVNDSLLDRINISIDTV 397
V Q+ N+L GT+ A+K E+ N+EK + + DS + + D V
Sbjct: 24 VLQEQNQLFGTKLSALKTAIEEIHENVEKIMGNFTDSEKSDVGKTFDNV 72
>U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical
protein F46H5.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 281 GTEQPAVKLKCEDFTSNIEKLADVNDSLLDR 373
G + ++ LKCE+ N+ KL D+N+ ++R
Sbjct: 197 GIKNLSIGLKCENSNENVAKLTDLNNEEIER 227
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 176 LPMSSSYDLFKTYPEFNEISNQISQNVA-QQSNELI 280
LP S Y FK + +SN+I QNVA Q N L+
Sbjct: 18 LPSFSEYAKFKATYHLHPLSNKIDQNVAVVQGNGLL 53
>Z80223-2|CAB02320.1| 344|Caenorhabditis elegans Hypothetical
protein F26D10.8 protein.
Length = 344
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -2
Query: 163 LYCLVNTSISFLCDCRQVWIKLR 95
+Y LV T+ISFL +C VW+ L+
Sbjct: 4 IYQLVCTAISFLLNCFLVWLILK 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,478,205
Number of Sequences: 27780
Number of extensions: 244534
Number of successful extensions: 827
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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