Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b11
(593 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing pro... 31 0.77
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 29 1.8
At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase, pu... 29 2.3
At1g34120.3 68414.m04233 inositol polyphosphate 5-phosphatase I ... 29 2.3
At1g34120.2 68414.m04232 inositol polyphosphate 5-phosphatase I ... 29 2.3
At1g34120.1 68414.m04231 inositol polyphosphate 5-phosphatase I ... 29 2.3
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 29 3.1
At1g15150.1 68414.m01811 MATE efflux family protein similar to r... 29 3.1
At1g13800.1 68414.m01620 pentatricopeptide (PPR) repeat-containi... 29 3.1
At3g26220.1 68416.m03271 cytochrome P450 family protein identica... 28 4.1
At2g45570.1 68415.m05667 cytochrome P450 76C2, putative (CYP76C2... 28 4.1
At1g15180.1 68414.m01815 MATE efflux family protein contains Pfa... 28 5.4
At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B... 28 5.4
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 27 7.1
At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transfera... 27 7.1
At3g26830.1 68416.m03356 cytochrome P450 71B15, putative (CYP71B... 27 7.1
At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containi... 27 7.1
At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identica... 27 7.1
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 27 9.4
At4g31480.1 68417.m04472 coatomer beta subunit, putative / beta-... 27 9.4
At1g69470.1 68414.m07982 hypothetical protein 27 9.4
At1g17690.1 68414.m02190 expressed protein 27 9.4
At1g15170.1 68414.m01814 MATE efflux family protein similar to r... 27 9.4
>At5g35910.1 68418.m04312 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein low similarity to SP|Q01780
Polymyositis/scleroderma autoantigen 2 {Homo sapiens};
contains Pfam profiles PF00570: HRDC domain, PF01612:
3'-5' exonuclease
Length = 838
Score = 30.7 bits (66), Expect = 0.77
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +2
Query: 143 SVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDF 322
++++ SS +P S + + + EF ++I+ +Q + IG + V K F
Sbjct: 32 TLSRLSSSSRLIPTSRDFHFYYNFDEFKRPIDEIT-GTSQSTLATIGDSEQ-VWGKSMKF 89
Query: 323 TSNIEK------LADVNDSLLDRINISID 391
+++ L +VND L++R ++S+D
Sbjct: 90 PGDVDDVYAEDWLCNVNDELIERFDVSVD 118
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 29.5 bits (63), Expect = 1.8
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = +2
Query: 83 NPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTY-----PEFNEISNQIS 247
N + P + A T+ G R V + K + +++ K + E +E S Q+S
Sbjct: 105 NAEGQRTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMNEVDEESKQVS 164
Query: 248 QNVAQQSNELIGTEQPAV--KLKCEDFTSNI-EKLA-DVNDSLLDRINISIDTV 397
V + N + E PA+ + E+ ++ + KL D + L D++ ++ TV
Sbjct: 165 YRVVRDENNNVKLECPAINKQFAAEEISAQVLRKLVDDASRFLNDKVTKAVITV 218
>At4g13610.1 68417.m02118 DNA (cytosine-5-)-methyltransferase,
putative similar to cytosine-5 methyltransferase (METII)
[Arabidopsis thaliana] GI:6523846; contains Pfam
profiles PF01426: BAH domain, PF00145: C-5
cytosine-specific DNA methylase
Length = 1404
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 449 PSHNSSPWNKPVISEKKMGSTIFIGAKNIPR-PQLTFKDTI 568
PS +PW +P++ ++G++I KN R +L++ D I
Sbjct: 377 PSEQYAPWFEPILKTVRIGTSILALLKNETRMAKLSYTDVI 417
>At1g34120.3 68414.m04233 inositol polyphosphate 5-phosphatase I
(IP5PI) nearly identical to inositol polyphosphate
5-phosphatase I [Arabidopsis thaliana] GI:10444261
Length = 589
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 221 FNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDS 361
F E S+ ++ N+L E V + ED +NI+ L ND+
Sbjct: 209 FVETSHDACDGISSMDNKLNSVESTDVPIVSEDSLTNIDVLGSTNDN 255
>At1g34120.2 68414.m04232 inositol polyphosphate 5-phosphatase I
(IP5PI) nearly identical to inositol polyphosphate
5-phosphatase I [Arabidopsis thaliana] GI:10444261
Length = 590
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 221 FNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDS 361
F E S+ ++ N+L E V + ED +NI+ L ND+
Sbjct: 209 FVETSHDACDGISSMDNKLNSVESTDVPIVSEDSLTNIDVLGSTNDN 255
>At1g34120.1 68414.m04231 inositol polyphosphate 5-phosphatase I
(IP5PI) nearly identical to inositol polyphosphate
5-phosphatase I [Arabidopsis thaliana] GI:10444261
Length = 586
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 221 FNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDS 361
F E S+ ++ N+L E V + ED +NI+ L ND+
Sbjct: 205 FVETSHDACDGISSMDNKLNSVESTDVPIVSEDSLTNIDVLGSTNDN 251
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 103 KLRCIWIKRGVHFDTQIKEVNRNQNTTAAFVE 8
KLR K +HF TQIKE+N+ NT + E
Sbjct: 608 KLRVFSFK--IHFGTQIKELNKGLNTVNSACE 637
>At1g15150.1 68414.m01811 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 487
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 435 PLANASLGKFSPLTVSMLILILSNKLSFTSASFSMLLVKSSHFSFTAGCSVPISS 271
P+A + +F +SM+++ +LS SASF++ + FSF G S + +
Sbjct: 41 PMAAVVIIQFMIQIISMVMVGHLGRLSLASASFAVSFCNVTGFSFIIGLSCALDT 95
>At1g13800.1 68414.m01620 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 883
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 185 SSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKL 307
S +YDLFK + E N +++ NVA + +G + A++L
Sbjct: 378 SEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIEL 418
>At3g26220.1 68416.m03271 cytochrome P450 family protein identical
to cytochrome P450 monooxygenase (CYP71B3) GB:D78602
[Arabidopsis thaliana] (Plant Mol. Biol. 37 (1), 39-52
(1998))
Length = 501
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 41 VHFFYLRIKMNSALNPDAPEFYPH--LAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTY 214
+ + L IK L+P AP P +A + +GY KTI N + + +L++
Sbjct: 354 LQYLKLVIKETLRLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENP 413
Query: 215 PEFN 226
EFN
Sbjct: 414 EEFN 417
>At2g45570.1 68415.m05667 cytochrome P450 76C2, putative (CYP76C2)
(YLS6) identical to SP|O64637 Cytochrome P450 76C2 (EC
1.14.-.-) {Arabidopsis thaliana}, cDNA YLS6 mRNA for
cytochrome P450 (CYP76C2), partial cds GI:13122289
Length = 512
Score = 28.3 bits (60), Expect = 4.1
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = +2
Query: 68 MNSALNPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNEISNQIS 247
M + NPDA F+P L + +G R KT+K+ ++ LFK + F I +++
Sbjct: 218 MEAVGNPDAANFFPFLGFLDLQGNR---KTLKACSE-------RLFKVFRGF--IDAKLA 265
Query: 248 QNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVND---SLLDRINISIDTVS 400
+ + +N E+ V + D T E + ND LLD DT S
Sbjct: 266 EKSLRDTNSKDVRERDFVDVLL-DLTEGDEAELNTNDIVHLLLDLFGAGTDTNS 318
>At1g15180.1 68414.m01815 MATE efflux family protein contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 482
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = -3
Query: 549 SCGRGMFLAPMNIVDPIFFSEMT-GLFQGDEL*EGLSLRPLANASLGKFSPLTVSMLILI 373
S + L P+ V+ + + ++ GLF + P+A + +F +SM+++
Sbjct: 6 STSKTSLLLPVERVENVTWRDLRDGLFTAELKRLICFAAPMAAVVIAQFMLQIISMVMVG 65
Query: 372 LSNKLSFTSASFSMLLVKSSHFSFTAGCSVPISS 271
LS SAS + + FSF G S + +
Sbjct: 66 HLGNLSLASASLASSFCNVTGFSFIVGLSCALDT 99
>At1g13090.1 68414.m01518 cytochrome P450 71B28, putative (CYP71B28)
Identical to Cytochrome P450 (SP:Q9SAE3) [Arabidopsis
thaliana]; strong similarity to gb|X97864 cytochrome
P450 from Arabidopsis thaliana and is a member of the
PF|00067 Cytochrome P450 family. ESTs gb|N65665,
gb|T14112, gb|T76255, gb|T20906 and gb|AI100027 come
from this gene
Length = 490
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 32 LISVHFFYLRIKMNSALNPDAPEFYPH--LAAVTQEGYRSVNKTIKSSNQLPMSSSYDLF 205
L +H+F L +K L+P AP P L+ V +GY KT N ++ L+
Sbjct: 346 LNQLHYFKLMVKEIFRLHPAAPLLLPRETLSHVKIQGYDIPAKTQIMINAYAIARDPKLW 405
Query: 206 KTYPEFN 226
EFN
Sbjct: 406 TNPDEFN 412
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1610
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +2
Query: 158 IKSSNQLPMSSSYDLFKTYPEFNEISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIE 337
I ++ Q+P++ D+F Y E +++ + Q LI E ++L D T +
Sbjct: 858 ITNNQQVPLTEETDVFDGYTEVTNWESELILYIISQMVSLIRGEDMCLEL-ATDLTGYVT 916
Query: 338 KLADVNDSL 364
+L + SL
Sbjct: 917 QLIPLIKSL 925
>At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 490
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 570 SIVSLKVSCGRGMFLAPMNIVDPIFFSEMTGLFQGDE 460
++ +K S A +NIV+ F S+ TGL +G E
Sbjct: 46 NVAKIKTSLSFSSLFATINIVEVKFLSQQTGLPEGCE 82
>At3g26830.1 68416.m03356 cytochrome P450 71B15, putative (CYP71B15)
Identical to Cytochrome P450 (SP:Q9LW27) [Arabidopsis
thaliana]; similar to cytochrome P450 71B2 GB:O65788
[Arabidopsis thaliana]
Length = 490
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 32 LISVHFFYLRIKMNSALNPDAPEFYPH--LAAVTQEGYRSVNKTIKSSNQLPMSSSYDLF 205
L +H+F L +K L+P P P ++ + +GY KT N M L+
Sbjct: 346 LNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLW 405
Query: 206 KTYPEFN 226
+ EFN
Sbjct: 406 ENADEFN 412
>At3g09650.1 68416.m01144 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 778
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -1
Query: 368 PISCRL-HQQVSLCCL*NPHTSASRPVVQ 285
P+S L H ++LC + P T+A RP+ Q
Sbjct: 27 PVSFTLIHNPINLCSINPPFTNAGRPIFQ 55
>At1g13110.1 68414.m01520 cytochrome P450 71B7 (CYP71B7) identical
to (SP:Q96514) cytochrome P450 71B7 [Arabidopsis
thaliana]; PF|00067 Cytochrome P450 family. ESTs
gb|T44875, gb|T04814, gb|R65111, gb|T44310 and gb|T04541
come from this gene; identical to cDNA cytochrome P450
GI:1523795, ATCYP71B7
Length = 504
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 32 LISVHFFYLRIKMNSALNPDAPEFYPH--LAAVTQEGYRSVNKTIKSSNQLPMSSSYDLF 205
L VH+F L +K L+P AP P ++ V +GY KT N ++ L+
Sbjct: 352 LSQVHYFKLVVKEIFRLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLW 411
Query: 206 KTYPEFN 226
EFN
Sbjct: 412 TNPDEFN 418
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 586
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 369 SNKLSFTSASFSMLLVKSSHFSFTAGCSVPISS 271
S+ LSFTS+ FS + S+HFS ++ + + S
Sbjct: 8 SSSLSFTSSHFSYGSIGSNHFSSSSASNPEVVS 40
>At4g31480.1 68417.m04472 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 971
Score = 27.1 bits (57), Expect = 9.4
Identities = 26/105 (24%), Positives = 41/105 (39%)
Frame = +2
Query: 50 FYLRIKMNSALNPDAPEFYPHLAAVTQEGYRSVNKTIKSSNQLPMSSSYDLFKTYPEFNE 229
F R+K + P P +L R+ I S +LP LF PE E
Sbjct: 142 FLCRMKETEIVEPLTPSVLQNLEHRHPFVRRNAILAIMSIYKLPQGDQ--LFVDAPEMIE 199
Query: 230 ISNQISQNVAQQSNELIGTEQPAVKLKCEDFTSNIEKLADVNDSL 364
Q+ + + N + A + SN++K++D N+SL
Sbjct: 200 KVLSTEQDPSAKRNAFLMLFTCAEERAVNYLLSNVDKVSDWNESL 244
>At1g69470.1 68414.m07982 hypothetical protein
Length = 140
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 4/26 (15%)
Frame = +2
Query: 83 NPDAPEFYPHLAA----VTQEGYRSV 148
NPDAP+ Y H+AA +T YR+V
Sbjct: 36 NPDAPQAYAHVAAYRILLTAANYRTV 61
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Frame = +2
Query: 17 GCRRILISVH--FFYLRIKMNSALN------PDAPEFYPHLAAVTQEGYRSVNKT 157
G R+I++ +FY R K+ N P+ EFYP + + +EG + T
Sbjct: 666 GSRKIMLYTERAYFYKRYKIRGIKNLILYSLPERKEFYPEIMNMLEEGSHDMMST 720
>At1g15170.1 68414.m01814 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 481
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -3
Query: 435 PLANASLGKFSPLTVSMLILILSNKLSFTSASFSMLLVKSSHFSFTAGCSVPISS 271
P+A + +F VSM+++ LS SAS + + FSF G S + +
Sbjct: 44 PMAAVVIAQFMLQIVSMMMVGHLGNLSLASASLASSFCNVTGFSFIIGLSCALDT 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,623,563
Number of Sequences: 28952
Number of extensions: 223667
Number of successful extensions: 743
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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