Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b10
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0470 - 10700092-10700505 149 1e-36
10_08_0951 - 21769342-21769752 149 2e-36
02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 39 0.003
08_02_1046 - 23919990-23920183,23920251-23920479,23920624-239210... 32 0.35
01_01_0249 + 2047793-2048561,2049861-2049896,2050068-2051012,205... 31 0.61
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 30 1.4
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042 30 1.4
01_01_0235 - 1964981-1964997,1965545-1966325 30 1.4
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379... 29 3.3
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 28 4.3
05_04_0110 + 18058821-18058900,18059119-18059182,18059351-180594... 28 4.3
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 4.3
12_02_0502 - 19746100-19746185,19746745-19750474 28 5.7
08_02_1498 + 27553449-27553730,27553834-27553946,27554063-275541... 28 5.7
06_03_0860 + 25484826-25485758,25486155-25486406 28 5.7
05_06_0119 + 25742277-25742434,25742976-25743061,25743146-257432... 28 5.7
12_02_0674 - 21745321-21746223,21746229-21747608 27 7.5
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 27 7.5
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 27 7.5
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 27 7.5
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 27 7.5
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 27 7.5
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 27 7.5
10_02_0059 + 4785858-4786988 27 10.0
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 27 10.0
09_02_0555 - 10588685-10592038 27 10.0
08_01_0649 + 5607234-5608397,5609358-5609513,5609598-5609796,561... 27 10.0
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 27 10.0
03_02_1029 - 13488535-13493037 27 10.0
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 27 10.0
>02_02_0470 - 10700092-10700505
Length = 137
Score = 149 bits (361), Expect = 1e-36
Identities = 68/137 (49%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Frame = +1
Query: 100 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 279
M K +KPGK V++L GRYAGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 280 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRFE 450
K K+S++K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+ + R E
Sbjct: 61 KTAKKSRVKCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLE 120
Query: 451 ERYKSGKNKWFFQKLRF 501
ER+K+GKN+WFF KLRF
Sbjct: 121 ERFKTGKNRWFFTKLRF 137
>10_08_0951 - 21769342-21769752
Length = 136
Score = 149 bits (360), Expect = 2e-36
Identities = 65/136 (47%), Positives = 98/136 (72%), Gaps = 2/136 (1%)
Frame = +1
Query: 100 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 279
M K +KPGK V++L GR+AGRKA++V+ ++EGT D+PYGH VAG+ +YP+KV ++
Sbjct: 1 MVKFLKPGKAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAK 60
Query: 280 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFEE 453
K K+S++K F+K+VN+ HLMPTRYT+D ++ +A + KK+ + + R E+
Sbjct: 61 KTAKKSRVKCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLED 120
Query: 454 RYKSGKNKWFFQKLRF 501
R+K+GKN+WFF KLRF
Sbjct: 121 RFKTGKNRWFFTKLRF 136
>02_04_0433 -
22891261-22891509,22892181-22892301,22892405-22892496,
22892692-22892755,22892855-22892920,22893102-22893193,
22893991-22894050,22894181-22894270,22894484-22894613,
22895066-22895157,22895299-22895373,22895663-22895754,
22896496-22896586,22897541-22897574,22897745-22897791,
22899110-22899209,22899300-22899436,22900837-22901015,
22901146-22901188,22901264-22901297,22901839-22901948,
22902043-22902224,22903062-22903168,22903266-22903480
Length = 833
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = +1
Query: 79 KRTNPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 195
++ NP+K+ + PG V+++L+GRY G++ + +K G
Sbjct: 64 RKANPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSG 102
>08_02_1046 -
23919990-23920183,23920251-23920479,23920624-23921057,
23921426-23921567,23922163-23922255,23923132-23923245,
23924181-23924266,23924458-23924506,23924717-23924783,
23925550-23925665,23925698-23925821,23926465-23926553,
23926810-23927061
Length = 662
Score = 31.9 bits (69), Expect = 0.35
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +3
Query: 150 VRGSQGYRSQELRRRYLRQAVRACFRRWYRQVPPESAQ--EDGKE*NPQEVQDKAFRE 317
V G+ G + ++RR+L QA+ + +R R PP +A E + P +++ AF E
Sbjct: 24 VAGAGGRKRGRVQRRHLTQALESFWRHAPRPAPPAAAARGEANRSWQPPPLENPAFEE 81
>01_01_0249 +
2047793-2048561,2049861-2049896,2050068-2051012,
2051215-2051264
Length = 599
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -1
Query: 352 NVLASSDYS-LQPSRKALSWTSCGFYSFPSSCALSGGTCRYQRRKHARTAC 203
N+ A ++YS L L W GF +C SGG CRY A AC
Sbjct: 194 NLTAGTNYSPLFKKGFVLEWQKNGFGDC-DACNASGGQCRYNNDSAAAFAC 243
>06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 135 GLKWPVRGSQGYRSQELRRRYLRQAVRACFRRWYRQ--VPPE-SAQEDGKE*N-PQEVQD 302
G KW + + RS E +R ++ +A+R R + ++ +PP DG E N +EV D
Sbjct: 1000 GNKWDMCTKEHSRSNEFKRLFVPEAIRKLIRPYDKELSIPPVFPGVHDGNEVNSKEEVND 1059
Query: 303 KA 308
+
Sbjct: 1060 SS 1061
>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
Length = 819
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 411 FCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYL 298
F + F+ C ++ EV T W +I YNLH ++L
Sbjct: 378 FIKEFKA-CINDYEEEVEFFTAWEAMISKYNLHNNVWL 414
>01_01_0235 - 1964981-1964997,1965545-1966325
Length = 265
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 352 NVLASSDYSLQPSRK-ALSWTSCGFYSFPSSCALSGGTCRYQRRKHARTAC 203
N+ A ++YS Q + L W GF +C SGG CRY A AC
Sbjct: 198 NLTAGTNYSPQFKKGFVLEWQKNGFGDC-DACNGSGGQCRYINDSAAAFAC 247
>04_04_0211 -
23636377-23636532,23636624-23636805,23637853-23637959,
23637997-23638280
Length = 242
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 100 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 195
M + PG V+++L+GR+ G++ + +K G
Sbjct: 94 MRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 125
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKLKSTV*RV 345
RSFL AG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>05_04_0110 +
18058821-18058900,18059119-18059182,18059351-18059437,
18059521-18059598,18060105-18060201,18060817-18060860,
18061071-18061257,18061324-18061406
Length = 239
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 358 LYNVLASSDYSLQPSRKALSWT 293
+YN L SSD S + SRK WT
Sbjct: 46 IYNALTSSDQSSKESRKMALWT 67
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 235 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 399
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 347 HVIQLTSALKNSAQKT*KTLQNVRSCVSTREYVLK 451
H++ S L N + + + LQNVR+C E LK
Sbjct: 729 HMLSALSTLTNLKRLSLRNLQNVRNCKDAMEIKLK 763
>08_02_1498 +
27553449-27553730,27553834-27553946,27554063-27554129,
27554310-27554402,27554516-27554659,27554860-27554954,
27555120-27555412,27555514-27555632,27555742-27556094,
27556177-27556286,27556403-27556512,27556802-27557671
Length = 882
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +1
Query: 139 LSGRYAGRKAIVVKNYDEGTSD-KPYGHAFVAGIDRYPRKVHKRMGKNKI 285
L R AG + ++ + GT D G V G+D R+VH G +
Sbjct: 599 LEHRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSEQGMGAV 648
>06_03_0860 + 25484826-25485758,25486155-25486406
Length = 394
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 188 TKVPPTSRTGMLSSLVSTGTPGKCTRGWER 277
T PP+ R + SSL+ TP KC+ G E+
Sbjct: 130 TPRPPSVRPVVASSLLPYTTPAKCSTGGEQ 159
>05_06_0119 +
25742277-25742434,25742976-25743061,25743146-25743223,
25743919-25744031,25744094-25744171,25744941-25744949,
25744981-25745082,25745165-25745714,25745941-25746146,
25746868-25747031,25747157-25747310
Length = 565
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -2
Query: 279 ILSHPLVHFPGVPVDTSDESMPVRLVGGTFVVILDYDSLATRVPAT*DQHYFTRLHYLTH 100
ILS P+++ GV V ++P+RL+ G FV ++ P T F L Y H
Sbjct: 98 ILSLPMLYLQGV-VLFPGATLPLRLIQGRFVAAVEKALRQVDAPCTIGVFNFQVLMYKRH 156
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 176 SRITTKVPPTSRTGMLSSLVS--TGTPGKC 259
S T+K+P T RT +LSS S TP C
Sbjct: 534 STATSKIPSTPRTSLLSSSTSKIPSTPSTC 563
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKLKSTV*RV 345
RSFL AG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKLKSTV*RV 345
RSFL AG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 387 CAEFFKAEVNCITCWHQVIIVYNLHERLYL 298
C ++ E +T W +I +NLH+ ++L
Sbjct: 436 CINLYEEETEFLTSWDAMINKHNLHDNVWL 465
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 414 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 253
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 414 TFCRVFQVFCAEFFKAEVNCITCWHQVIIVYNLHERLYLGPLVDFILSHPLVHF 253
TF + F + E + WH++I YNL + +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_02_0059 + 4785858-4786988
Length = 376
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>08_01_0649 +
5607234-5608397,5609358-5609513,5609598-5609796,
5612419-5613608,5614505-5614660,5614742-5615041
Length = 1054
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +1
Query: 181 NYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTV 360
++DE HA G + + G + I P +K++ HL TR+T
Sbjct: 613 SHDEDDVSAWIAHAVRRGAEEIDLSARRHHGYPVPDYKHFISPKIKILKLTHLGTTRFTA 672
Query: 361 D 363
D
Sbjct: 673 D 673
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 425 RSFLRFAGSFRSFALNFSKL 366
RSFL AG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 27.1 bits (57), Expect = 10.0
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +1
Query: 250 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF 429
R H R+ N + S+ ++ N PT F + KD P +R R
Sbjct: 292 RSKHGRLDDNLTDENSERLWKMEPFNSEDRFPTPIVEQFDTRDYGFKDRYSPEQRTSTRT 351
Query: 430 NTR 438
NTR
Sbjct: 352 NTR 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,279,126
Number of Sequences: 37544
Number of extensions: 294049
Number of successful extensions: 875
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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