Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b10
(553 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p pro... 222 3e-58
AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA... 222 3e-58
AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-P... 33 0.34
DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.4
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 31 1.4
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 31 1.4
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 31 1.4
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 31 1.4
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 31 1.4
>AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p
protein.
Length = 135
Score = 222 bits (542), Expect = 3e-58
Identities = 101/135 (74%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Frame = +1
Query: 100 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 279
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 280 KIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFEER 456
K+ K+SK+KPF+K +NYNHLMPTRYT D SFEK S KDLKDP KRK RF TRV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120
Query: 457 YKSGKNKWFFQKLRF 501
YK GKNKWFFQKLRF
Sbjct: 121 YKEGKNKWFFQKLRF 135
>AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA
protein.
Length = 135
Score = 222 bits (542), Expect = 3e-58
Identities = 101/135 (74%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Frame = +1
Query: 100 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 279
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 280 KIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFEKFSAKDLKDPAKRKKLRFNTRVRFEER 456
K+ K+SK+KPF+K +NYNHLMPTRYT D SFEK S KDLKDP KRK RF TRV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120
Query: 457 YKSGKNKWFFQKLRF 501
YK GKNKWFFQKLRF
Sbjct: 121 YKEGKNKWFFQKLRF 135
>AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-PA
protein.
Length = 506
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 343 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 429
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKVV 324
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,822,185
Number of Sequences: 53049
Number of extensions: 488773
Number of successful extensions: 1221
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -