Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b09
(553 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 28 0.047
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 2.3
AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochr... 22 3.1
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 4.1
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 22 4.1
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.5
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 9.5
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 28.3 bits (60), Expect = 0.047
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 429 HTNKIVLELRGNPYPDLIV 485
HT +VL+ GNP PD+I+
Sbjct: 311 HTPNVVLDEEGNPCPDIII 329
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.6 bits (46), Expect = 2.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 84 KLRMNIKPEHRRLKNLKGPEGRIDKLRKTVTGLIKFERIELNINR 218
K + NIK RR+ + E I + + G++ E + LNI+R
Sbjct: 345 KRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISR 389
>AF264720-1|AAF75272.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenaseCYP4Q1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 487 LTIKSGYGLPRSSNTILFVCSV 422
L GY LP+ SN I+ + V
Sbjct: 73 LITTGGYTLPKESNAIIHIYDV 94
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 54 NQAEVSKLVSKLRMNIKPEHRRLKNLKGP 140
NQ ++K+R + R KNLK P
Sbjct: 242 NQQRTGTELTKMRPKRQSSRRHRKNLKDP 270
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1
Query: 100 IFIRSFETSLET 65
+FIR FETS E+
Sbjct: 110 VFIRKFETSFES 121
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 466 GLPRSSNTILFVC 428
G+P NTI++ C
Sbjct: 181 GMPGKKNTIVYAC 193
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 466 GLPRSSNTILFVC 428
G+P NTI++ C
Sbjct: 181 GMPGKKNTIVYAC 193
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 466 GLPRSSNTILFVC 428
G+P NTI++ C
Sbjct: 181 GMPGKKNTIVYAC 193
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 466 GLPRSSNTILFVC 428
G+P NTI++ C
Sbjct: 181 GMPGKKNTIVYAC 193
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 466 GLPRSSNTILFVC 428
G+P NTI++ C
Sbjct: 181 GMPGKKNTIVYAC 193
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/36 (22%), Positives = 18/36 (50%)
Frame = +1
Query: 250 LYQKLSVMVTVTNQLWTWPIFGFLKNSLFINYSKFW 357
LY+ L+ M+ + N ++ W + L + + S +
Sbjct: 209 LYRILTTMMEMVNDIFGWTLILILAKCITSSLSSLY 244
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,533
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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