Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b09
         (553 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-4|AAF60758.2|  194|Caenorhabditis elegans Hypothetical ...    81   5e-16
Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical pr...    28   3.9  
U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z92831-5|CAJ58498.1|  247|Caenorhabditis elegans Hypothetical pr...    23   6.3  
Z71177-5|CAA94871.2|  531|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF038615-5|AAB94142.1|  934|Caenorhabditis elegans Hypothetical ...    27   9.0  

>AC024810-4|AAF60758.2|  194|Caenorhabditis elegans Hypothetical
           protein Y54E10A.7 protein.
          Length = 194

 Score = 81.0 bits (191), Expect = 5e-16
 Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
 Frame = +3

Query: 147 RIDKLRKTVTGLIKFERIELNINRGDEARQYAERLISEAIRHGDCHKPTMDMANFWLLEK 326
           R++ LR+ VT  ++ ER EL  NR  EAR Y ERLI   +  G   + T +M  +WL EK
Sbjct: 36  RLEVLRRIVTRTVREERAELKWNRAVEARPYLERLIQLGVERGPLDEYTAEMMEWWLPEK 95

Query: 327 QLVHKLFKVLVPRFENSTVSYTKMIKAPK------AQNTEHTNKI----VLELRGNPYPD 476
            L+ K+ +V+VPRF++    +T + + P        QN     K     VLE+ GNP+P 
Sbjct: 96  DLITKMHEVIVPRFQDRDSPFTSLFRLPPQRLQQFIQNKREVWKRYDIGVLEIDGNPFPQ 155

Query: 477 LIVKQPNNRLWIQNVLL 527
           +   + +    I +VLL
Sbjct: 156 IQADRVDQSESILDVLL 172


>Z70203-1|CAA94104.1|  456|Caenorhabditis elegans Hypothetical
           protein C05G5.1 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = -1

Query: 247 LSAYWRASSPRLIFNSILSNFINPVTVLRNLSILP-----SGPLRFFN 119
           L+AYW A + R I N+ LS+  NP+ +    S+ P     + P  FFN
Sbjct: 137 LAAYWFADNERAIANT-LSSMSNPIGIAVMYSLAPVFVNKTTPDNFFN 183


>U97006-3|AAC47966.1|  470|Caenorhabditis elegans Hypothetical
           protein C13F10.6 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 22/105 (20%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = +3

Query: 24  NKVKEIKITMNQAEVSKLVSKLRMNIKPEHRRLKNLKGPEGRIDKLRKTVTGLIKFERIE 203
           N++ E +I   +  V +++  +    K     ++N +     +D+       L + E +E
Sbjct: 104 NRIVEFEIRCRRFTV-QILDNIEKFPKLNRIIVRNARNFSFELDEESGDAAVLDRIESLE 162

Query: 204 LNINRGDEAR-QYAERLISEAIRHGDCHKPTMDMANFWLLEKQLV 335
           L+++R      +  +RLI+  ++H  CH       N W +E+ +V
Sbjct: 163 LHLDRQWCTEIERMKRLINPNLKHFCCHVNPSLSKNSWFIEEIMV 207


>Z92831-5|CAJ58498.1|  247|Caenorhabditis elegans Hypothetical
           protein F22G12.8 protein.
          Length = 247

 Score = 23.4 bits (48), Expect(2) = 6.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 141 EGRIDKLRKTVTGLIKFERIELNINRGDEARQYAERLIS 257
           +  +D L +T  G++K   IEL IN+  +  +  E  +S
Sbjct: 67  KSELDNLVETTEGIMKSNGIELIINKEIDQTKIREIALS 105



 Score = 22.6 bits (46), Expect(2) = 6.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 294 MDMANFWLLEKQLVHKLFKVLVPRF 368
           MD A  WL E  + +K  KVL+  F
Sbjct: 146 MDYAKDWLDEHMICYKEEKVLLATF 170


>Z71177-5|CAA94871.2|  531|Caenorhabditis elegans Hypothetical
           protein AC3.8 protein.
          Length = 531

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 16/55 (29%), Positives = 31/55 (56%)
 Frame = -2

Query: 543 HILQHRAIHFESIIYYLVV*QLSLDMDYLAVLIQFYLYVQYSEL*VL*SFLYKKL 379
           H L+  ++H+  I YY+        +D  A++I F+L + Y  L ++  F+Y+K+
Sbjct: 478 HALEPYSVHYNFIKYYM--------LDAYAIIIIFFLSILY-VLNLIIKFVYRKI 523


>AF038615-5|AAB94142.1|  934|Caenorhabditis elegans Hypothetical
           protein R02D3.1 protein.
          Length = 934

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -1

Query: 262 ASDISLSAYWRASSPRLIFNSILSNFINPV 173
           AS I    YW A SPRLI      N + PV
Sbjct: 309 ASVIINGVYWDAQSPRLITIPDAKNLLTPV 338


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,916,970
Number of Sequences: 27780
Number of extensions: 239621
Number of successful extensions: 616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)