Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b06
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   4.4  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    22   5.9  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    22   5.9  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   7.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 81   TSQRIHRRRSAFYMYVHTVHGI 16
            + Q +    S  +M VH+VHGI
Sbjct: 1980 SQQLVGSALSVLWMVVHSVHGI 2001


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 62  GVVLHFICTSTRYTELTDA 6
           G+ LH +   TRY  L DA
Sbjct: 130 GLELHLVHHDTRYASLEDA 148


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 58  TPVNSLTCTARGNARPATASSTLR 129
           T V SLT   RGN   AT+   +R
Sbjct: 654 TAVRSLTDFTRGNTNMATSQVQIR 677


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 55  TTPVNSLTCTARGNARPATASSTLRTMLQY 144
           +T V +LT  ARG  +  +   TLR  ++Y
Sbjct: 130 STVVTALTNGARGANKKLSKVDTLRLAVEY 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,150
Number of Sequences: 2352
Number of extensions: 6760
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)