Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11b04
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.73 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.73 
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    25   2.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.0  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   3.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   9.0  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +3

Query: 357 NPDSSDFGYTKTVQIHSYLSTSNCF---RKDGAA---TSCGQA*CVTNN*YHWY 500
           +PD +D  +    Q+H  +S  N F   R+ G A    SCG+   VTN  +H++
Sbjct: 493 SPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKE--VTNRWHHFH 544


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +3

Query: 357 NPDSSDFGYTKTVQIHSYLSTSNCF---RKDGAA---TSCGQA*CVTNN*YHWY 500
           +PD +D  +    Q+H  +S  N F   R+ G A    SCG+   VTN  +H++
Sbjct: 469 SPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKE--VTNRWHHFH 520


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 175 NEVLSPATQNTLNAAKKIG 231
           ++++SP+ QN L  AKK+G
Sbjct: 5   SDIVSPSCQNVLLVAKKLG 23


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +1

Query: 475  SPITDIIGIKDANTFVRTIYAGNAILTLEAK--DPIKVI-TVRGTA 603
            +PI D +G+K +      IY   +I+   AK  DP+ ++ TV+  A
Sbjct: 940  NPILDTLGVKISEPETCEIYTKRSIIRTIAKIYDPLGIVDTVKAKA 985


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 581 SSLFVAQHSLQSHWREGLQQLIKHL 655
           ++ F+ +  L   W EGLQ  +K+L
Sbjct: 381 TATFLTRGGLWLSWEEGLQHFLKYL 405


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
 Frame = +1

Query: 406  HILAPATAFGKTVLPRVAAKLDVSPITDIIG-IKDANTFVRTIYAGNAILTLEAKDPIKV 582
            H   PA  F   VL  + A LD + I  +   I++  T ++TI     +++L+ +     
Sbjct: 1145 HSFQPAPFF---VLDEIDAALDNTNIGKVASYIREKTTNLQTI-----VISLKEEFYCHA 1196

Query: 583  ITVRGTA-FPAEPLEGGSAAIDKAPEGDYKTD 675
              + G   +PAE L   +   D    GDY+ D
Sbjct: 1197 DVLIGICPYPAECLVSQTLIFDLEKYGDYRQD 1228


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -3

Query: 146 CKRRSCPDKNKCLLLGANILI 84
           CKR  CP+   C+ +  + +I
Sbjct: 773 CKRCPCPNNGACMQMAGDTVI 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,888
Number of Sequences: 2352
Number of extensions: 15431
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)