Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b02
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 223 1e-59
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 103 2e-23
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 100 4e-22
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 92 7e-20
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 87 2e-18
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 81 1e-16
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 81 2e-16
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 81 2e-16
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 32 0.064
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 28 1.0
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 27 1.8
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 26 4.2
SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1 |Schiz... 25 7.3
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 7.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 7.3
SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr ... 25 9.7
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 25 9.7
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 25 9.7
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 25 9.7
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 223 bits (546), Expect = 1e-59
Identities = 111/193 (57%), Positives = 143/193 (74%)
Frame = +3
Query: 81 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 260
+SLLNPKAE + AQAL VNISAA G+QDV+K+NLGP GT KMLV GAG IK+TKDG VL
Sbjct: 2 LSLLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVL 61
Query: 261 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 440
L EMQIQ+PTAS IA+ LL+GELLKQA+++I EGLHP +I++GF
Sbjct: 62 LTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGF 121
Query: 441 DIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG 620
++A+N++L L+S K E+ RE L++VA+TSL TK+ + + L A VDA+LTIR P
Sbjct: 122 NLAKNEALTFLDSFKTDFEVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPD 181
Query: 621 KPVDLHMVEIMEM 659
+P+DLHMVEIM+M
Sbjct: 182 EPIDLHMVEIMKM 194
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 103 bits (248), Expect = 2e-23
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
NI AA+ + D ++T+LGPKG KM+ +G G++ +T DG +L + + HP A ++
Sbjct: 24 NIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSA 83
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 497
V+L G +L A+ + +G+HP +I E F A +++ ++ + IE
Sbjct: 84 AQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE 143
Query: 498 IA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GKPVDLHMVEIME 656
++ RE+L+ A TSL +K+ +++L VDAVL + P VDL + I++
Sbjct: 144 LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVK 199
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 99.5 bits (237), Expect = 4e-22
Identities = 54/179 (30%), Positives = 102/179 (56%), Gaps = 4/179 (2%)
Frame = +3
Query: 126 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 305
A+ +I A K + ++++T+LGP+G K+L+S G+I +T DG +L +M+++H A L+
Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 306 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMK 485
+ V+L G LL+QA+ I +G+HP I +G++ A +++ L+++
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAIS 154
Query: 486 IPIEIARENLVDV---ARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEI 650
++ + EN ++ A+TSL +KV D + VDAVL++ K VD ++++
Sbjct: 155 DVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKV 213
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 91.9 bits (218), Expect = 7e-20
Identities = 44/161 (27%), Positives = 91/161 (56%), Gaps = 2/161 (1%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
N+ A I +V+K++LGP G KMLV GD+ +T DG +L + ++HP ++
Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQ 85
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL-ESMKIPI 494
V++ ELL++A+ + +HP I G+ +A ++++ + + + +
Sbjct: 86 QQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSV 145
Query: 495 E-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRT 614
+ + +E+L++VA+TS+ +K+ + +D + VDA+L+++T
Sbjct: 146 DSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKT 186
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 87.0 bits (206), Expect = 2e-18
Identities = 42/158 (26%), Positives = 80/158 (50%), Gaps = 1/158 (0%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
NI AAK + DV++T LGP+ +KML+ G + +T DG+ +L E+++ HP A +
Sbjct: 24 NIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELAR 83
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 497
++L GE+L A + +HP ++ F A +L +++ + +P+
Sbjct: 84 TQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVN 143
Query: 498 I-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 608
+ + + RT + TK+ +D++ + AV T+
Sbjct: 144 VDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTV 181
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 81.4 bits (192), Expect = 1e-16
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Frame = +3
Query: 129 LAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 308
L NI+A +QD ++T LGP G K++V G++ I+ DG ++ + I HP A +
Sbjct: 26 LLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVD 85
Query: 309 XXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKI 488
V+ GELL++A F+ +G+ +I G+ A ++ ++ + I
Sbjct: 86 IARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAI 145
Query: 489 PIEIA-----RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 608
++++ R+ L A T++ +K+ S + T VDAVLT+
Sbjct: 146 HLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL 190
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 80.6 bits (190), Expect = 2e-16
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Frame = +3
Query: 114 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGA-GDIKITKDGNVLLHEMQIQHPT 290
R A + A + D++K+ LGPKG K+L S + GDI +T DG +L + + +
Sbjct: 17 RGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAA 76
Query: 291 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEV 470
A ++ + ELL+QA+I ++ +HP++I +G+ IA +++
Sbjct: 77 AKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDA 136
Query: 471 LESMKI-----PIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDL 635
L + I P + R +L ++ART+L +K+ + VDAVL ++ ++
Sbjct: 137 LRASSIDNSSDPAKF-RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGSTNLDNI 195
Query: 636 HMVEIM 653
+++I+
Sbjct: 196 QIIKIL 201
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 80.6 bits (190), Expect = 2e-16
Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 7/183 (3%)
Frame = +3
Query: 126 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 305
A+ N +A + + ++ +T+LGP G K++V+ +T D ++ E+++ HP A L+
Sbjct: 27 AVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVV 86
Query: 306 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM- 482
V+ GELL +A+ I GL P I +G+++A + ++EVLE +
Sbjct: 87 DATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEIC 146
Query: 483 --KIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGK-PVD-LHMV 644
KI + + L+ RT + +K + + D L+D A+LT+ + P K VD + +V
Sbjct: 147 ADKIETVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVDNIRVV 205
Query: 645 EIM 653
+IM
Sbjct: 206 KIM 208
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 32.3 bits (70), Expect = 0.064
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 6/153 (3%)
Frame = +3
Query: 171 MKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR----XXXXXXXXXX 338
+ LGPKG ++ G KITKDG + + ++ +L AR
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 339 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIARENLV 518
+L + + ++ G +P + G +A + +E L++ K I + E +
Sbjct: 118 DGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTS-EEIS 176
Query: 519 DVARTSLK--TKVHPSLADVLTDACVDAVLTIR 611
VA S T + LA + + V+T++
Sbjct: 177 QVATISANGDTHIGELLAKAMERVGKEGVITVK 209
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 393 IFISEGLHPRIITEGFDIARNKSLEVLESMKI 488
+F+ E + I EGF IAR K +E LE +K+
Sbjct: 437 VFLLEEIVELCIAEGFLIARAKRVESLERVKV 468
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 597 PHQRKHQLAHLPSLGGP*F*VKY 529
PHQR H A L GGP F + Y
Sbjct: 63 PHQRAHNAAALARSGGPGFSMNY 85
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 73 ISFNTFSVSINHEETLSYKPI 11
ISFN+FS S+N EE + P+
Sbjct: 203 ISFNSFSNSLNSEEDVCVSPM 223
>SPAC22H10.12c |gdi1|sec19|GDP dissociation inhibitor Gdi1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 25.4 bits (53), Expect = 7.3
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 15 GLYERVSS*LIETENVLNEMA-AISLLNPKAE-FARAAQ 125
G Y + S ++ET N L+E+A + LL P E F+R +
Sbjct: 347 GYYLAIISTIVETANPLSEIAPGLKLLGPVVESFSRVQE 385
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/43 (25%), Positives = 27/43 (62%)
Frame = +3
Query: 453 NKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTD 581
++SL++L+ + ++ ++ VD+ART ++ S ++V+ D
Sbjct: 270 SESLDLLDDFNYQVTVSNKSFVDIARTEYFITIY-SDSNVILD 311
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.4 bits (53), Expect = 7.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -2
Query: 242 GDLYVPSTRNQHFHRAFRTKVSFHYILNSFSC 147
G + S RN+ FHR F+ ++++ + C
Sbjct: 187 GYAFANSKRNRDFHRIFKVLPPEDHLIDDYGC 218
>SPBC713.06 |adl1|lig3|DNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 774
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 408 GLHPRIITEGFDIARNKSLE-VLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDA 584
G P +I E +A S + ++E + I+ + ++D + S + + ++AD+ D
Sbjct: 461 GRFPDVI-EVAQLALKHSCDFIIEGELVAIDKSNGQILDFQKLSTRERKKVTVADITIDV 519
Query: 585 CV 590
CV
Sbjct: 520 CV 521
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 191 RTKVSFHYILNSFSCGYIYSKCLCS 117
RT +S+H LN+ Y +C+CS
Sbjct: 211 RTDLSYHKKLNTLFTAYWDLQCMCS 235
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +3
Query: 33 SS*LIETENVLNEMAAISL-----LNPKAEFARAAQALAVNI 143
SS IE E+V+ AA+SL LNPK A + Q ++I
Sbjct: 447 SSSFIEEEHVIWYFAAVSLSLLQLLNPKTRLAGSLQLFCLSI 488
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.0 bits (52), Expect = 9.7
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 492 IEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVE 647
I I L D++ T K VHPS++ L A + L +++ G + ++VE
Sbjct: 7 ILITPSPLSDISTTINKPNVHPSMS--LLKALPECRLVVKSKGDKNNANVVE 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,574,122
Number of Sequences: 5004
Number of extensions: 48308
Number of successful extensions: 129
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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