Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11b02
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02530.1 68416.m00241 chaperonin, putative similar to SWISS-P... 203 9e-53
At5g16070.1 68418.m01878 chaperonin, putative similar to SWISS-P... 202 2e-52
At3g18190.1 68416.m02314 chaperonin, putative similar to SWISS-P... 117 8e-27
At5g26360.1 68418.m03151 chaperonin, putative similar to SWISS-P... 99 2e-21
At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit / TCP... 93 1e-19
At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit, pu... 90 1e-18
At3g03960.1 68416.m00415 chaperonin, putative similar to SWISS-P... 78 6e-15
At3g11830.1 68416.m01450 chaperonin, putative similar to SWISS-P... 75 6e-14
At5g20890.1 68418.m02481 chaperonin, putative similar to SWISS-P... 74 7e-14
At5g56500.1 68418.m07051 chaperonin, putative similar to SWISS-P... 47 1e-05
At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit, pu... 46 2e-05
At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta su... 45 4e-05
At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta su... 45 4e-05
At3g13470.1 68416.m01695 chaperonin, putative similar SWISS-PROT... 42 3e-04
At1g26230.1 68414.m03200 chaperonin, putative similar to SWISS-P... 38 0.008
At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to... 36 0.018
At2g33210.1 68415.m04069 chaperonin, putative similar to SWISS-P... 35 0.042
At3g59120.1 68416.m06591 DC1 domain-containing protein contains ... 34 0.096
At3g13860.1 68416.m01751 chaperonin, putative similar to SWISS-P... 33 0.13
At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit, pu... 30 1.6
At1g20740.1 68414.m02598 expressed protein ; expression supporte... 29 2.1
At3g45530.1 68416.m04917 DC1 domain-containing protein contains ... 29 3.6
At1g02080.1 68414.m00130 transcriptional regulator-related conta... 29 3.6
At5g40780.2 68418.m04951 lysine and histidine specific transport... 27 8.4
At5g40780.1 68418.m04950 lysine and histidine specific transport... 27 8.4
>At3g02530.1 68416.m00241 chaperonin, putative similar to
SWISS-PROT:P80317- T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 203 bits (495), Expect = 9e-53
Identities = 102/198 (51%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Frame = +3
Query: 78 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 257
++ +LNP AE + AL + I+AAKG+QDV+K+NLGPKGT+KMLV G+GDIK+TKDGN
Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61
Query: 258 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 437
LL EMQIQ+PTA +IAR V+ IGEL+KQ++ I EG+HPR++ +G
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121
Query: 438 FDIARNKSLEVLESMKIPI----EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLT 605
F+IA+ +L+ L++ K P+ E +E L VART+L+TK++ LAD LTD V++VL
Sbjct: 122 FEIAKRATLQFLDTFKTPVVMGDEPDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181
Query: 606 IRTPGKPVDLHMVEIMEM 659
IR P +P+DL MVEIM M
Sbjct: 182 IRKPQEPIDLFMVEIMHM 199
>At5g16070.1 68418.m01878 chaperonin, putative similar to
SWISS-PROT:P80317 T-complex protein 1, zeta subunit
(TCP-1-zeta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 535
Score = 202 bits (493), Expect = 2e-52
Identities = 101/198 (51%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Frame = +3
Query: 78 AISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNV 257
++ +LNP AE + AL + I+AAKG+QDV+K+NLGPKGT+KMLV G+GDIK+TKDGN
Sbjct: 2 SVRVLNPNAEVLNKSAALHMTINAAKGLQDVLKSNLGPKGTIKMLVGGSGDIKLTKDGNT 61
Query: 258 LLHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEG 437
LL EMQIQ+PTA +IAR V+ IGEL+KQ++ I EG+HPR++ +G
Sbjct: 62 LLKEMQIQNPTAIMIARTAVAQDDISGDGTTSTVIFIGELMKQSERCIDEGMHPRVLVDG 121
Query: 438 FDIARNKSLEVLESMKIPI----EIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLT 605
F+IA+ +L+ L++ K P+ E+ +E L VART+L+TK++ LAD LTD V++VL
Sbjct: 122 FEIAKRATLQFLDNFKTPVVMGDEVDKEILKMVARTTLRTKLYEGLADQLTDIVVNSVLC 181
Query: 606 IRTPGKPVDLHMVEIMEM 659
IR P + +DL MVEIM M
Sbjct: 182 IRKPEEAIDLFMVEIMHM 199
>At3g18190.1 68416.m02314 chaperonin, putative similar to
SWISS-PROT:P50991- T-complex protein 1, delta subunit
(TCP-1-delta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 536
Score = 117 bits (281), Expect = 8e-27
Identities = 58/176 (32%), Positives = 104/176 (59%), Gaps = 3/176 (1%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
NI++A+ + D ++T+LGPKG KM+ + G++ IT DG +L++M++ P A ++
Sbjct: 33 NINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKMLVELSK 92
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 497
V++ G LLK+ ++ G+HP +I++ A K++++L +M +P+E
Sbjct: 93 SQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAMAVPVE 152
Query: 498 IA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKP--VDLHMVEIME 656
+ R++LV A TSL +KV + +L VDAVL++ P KP VDL ++I++
Sbjct: 153 LTDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDPEKPEIVDLRDIKIVK 208
>At5g26360.1 68418.m03151 chaperonin, putative similar to
SWISS-PROT:P50143- T-complex protein 1, gamma subunit
(TCP-1-gamma) [Xenopus laevis]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 555
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 1/158 (0%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
NI A+K + D+++T LGP+ +KML+ G I +T DGN +L E+ + HP A +
Sbjct: 24 NIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 497
++L GE+L A+ F+ + HP +I + A S+ VL+ + + I+
Sbjct: 84 TQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVICRAYIKALEDSIAVLDKIAMSID 143
Query: 498 I-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI 608
I R ++ + ++ + TK D++ D +DA T+
Sbjct: 144 INDRSQVLGLVKSCIGTKFTSQFGDLIADLAIDATTTV 181
>At3g20050.1 68416.m02536 T-complex protein 1 alpha subunit /
TCP-1-alpha / chaperonin (CCT1) identical to
SWISS-PROT:P28769- T-complex protein 1, alpha subunit
(TCP-1-alpha) [Arabidopsis thaliana]
Length = 545
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/160 (28%), Positives = 88/160 (55%), Gaps = 2/160 (1%)
Frame = +3
Query: 138 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 317
N+ A + + +++KT+LGP G KMLV GD+ IT DG +L ++++HP A ++
Sbjct: 24 NVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAE 83
Query: 318 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKI-PI 494
V++ ELLK+A+ + +HP I G+ +A +S + +E + +
Sbjct: 84 LQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKV 143
Query: 495 E-IARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 611
E + + L++ A+TS+ +K+ +D + V+AVL+++
Sbjct: 144 EKLGKVPLINCAKTSMSSKLISGDSDFFANLVVEAVLSVK 183
>At1g24510.1 68414.m03086 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 535
Score = 89.8 bits (213), Expect = 1e-18
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Frame = +3
Query: 114 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTA 293
R A NI+A K + +++++LGPKG KML GDI IT DG +L +M + + A
Sbjct: 25 RGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGPDGDITITNDGATILEQMDVDNQIA 84
Query: 294 SLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL 473
L+ V++ G LL+QA+ + G+HP I EG+++A ++E L
Sbjct: 85 KLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHL 144
Query: 474 E--SMKIPIEIAR-ENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHM 641
E + K ++ E LV T+L +K+ L + V AVL + + V+L +
Sbjct: 145 ERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDL 204
Query: 642 VEI 650
+++
Sbjct: 205 IKV 207
>At3g03960.1 68416.m00415 chaperonin, putative similar to
SWISS-PROT:P42932- T-complex protein 1, theta subunit
(TCP-1-theta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 549
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/120 (31%), Positives = 64/120 (53%)
Frame = +3
Query: 123 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLI 302
+A+ NI A K + + +T+LGP G KM+++ + +T D +++E++IQHP A L+
Sbjct: 27 EAVIKNIEACKELSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEIQHPAAKLL 86
Query: 303 ARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM 482
+ GELL+ A+ I GLHP I G+ A +K++E+LE +
Sbjct: 87 VLAAKAQQEEIGDGANLTISFAGELLQNAEELIRMGLHPSEIISGYTKAVSKAVEILEQL 146
>At3g11830.1 68416.m01450 chaperonin, putative similar to
SWISS-PROT:P80313 T-complex protein 1, eta subunit
(TCP-1-eta) [Mus musculus]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 557
Score = 74.5 bits (175), Expect = 6e-14
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 5/181 (2%)
Frame = +3
Query: 81 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 260
I LL + ++ L NI+A + DV++T LGP+G K++ G + I+ DG +
Sbjct: 9 IILLKEGTDTSQGKAQLVSNINACTAVGDVVRTTLGPRGMDKLIHDDKGSVTISNDGATI 68
Query: 261 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 440
+ + I HP A ++ VLL E LK+A FI +G+H + + +
Sbjct: 69 MKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIEDGVHAQNLIRSY 128
Query: 441 DIARNKSLEVLESMKIPIE--IAREN---LVDVARTSLKTKVHPSLADVLTDACVDAVLT 605
A ++ ++ + + IE E L A T+L +K+ + VDAV+
Sbjct: 129 RTASTLAIAKVKELAVSIEGKSVEEKKGLLAKCAATTLSSKLIGGEKEFFATMVVDAVMA 188
Query: 606 I 608
I
Sbjct: 189 I 189
>At5g20890.1 68418.m02481 chaperonin, putative similar to
SWISS-PROT:P78371- T-complex protein 1, beta subunit
(TCP-1-beta) [Homo sapiens]; contains Pfam:PF00118
domain, TCP-1/cpn60 chaperonin family
Length = 527
Score = 74.1 bits (174), Expect = 7e-14
Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Frame = +3
Query: 114 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVS-GAGD-IKITKDGNVLLHEMQIQHP 287
+ +A + A I D++K+ LGPKG K+L S G G + +T DG +L + I +P
Sbjct: 15 KGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNP 74
Query: 288 TASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF----DIARN 455
A ++ V+L GELL++A+ ++ +HP I G+ + ARN
Sbjct: 75 AAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARN 134
Query: 456 KSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIR 611
L+ + K E R +L+ +A T+L +K+ + + VDAV ++
Sbjct: 135 ALLKRVIDNKDNAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRLK 186
>At5g56500.1 68418.m07051 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 597
Score = 46.8 bits (106), Expect = 1e-05
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 8/174 (4%)
Frame = +3
Query: 159 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 326
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAASKTN 133
Query: 327 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 506
V+L L+ + ++ G +P +IT G + K+L V E K+ E+
Sbjct: 134 DLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIE-KTTKAL-VAELKKMSKEVED 191
Query: 507 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 656
L DVA S +V +A+ + V+T+ GK + L++VE M+
Sbjct: 192 SELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE-EGKSAENSLYVVEGMQ 244
>At1g24510.2 68414.m03085 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative identical to SWISS-PROT:O04450- T-complex
protein 1, epsilon subunit (TCP-1-epsilon) [Arabidopsis
thaliana]; strong similarity to SP|P54411 T-complex
protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon)
(TCP-K36) {Avena sativa}; contains Pfam:PF00118 domain,
TCP-1/cpn60 chaperonin family
Length = 459
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +3
Query: 357 VLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLE--SMKIPIEIAR-ENLVDVA 527
V++ G LL+QA+ + G+HP I EG+++A ++E LE + K ++ E LV
Sbjct: 30 VVMAGALLEQAERQLDRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTC 89
Query: 528 RTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEI 650
T+L +K+ L + V AVL + + V+L ++++
Sbjct: 90 MTTLSSKIVNRCKRSLAEIAVKAVLAVADLERRDVNLDLIKV 131
>At1g55490.2 68414.m06348 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 45.2 bits (102), Expect = 4e-05
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 8/174 (4%)
Frame = +3
Query: 159 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 326
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 327 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 506
V+L + + ++ G +P +IT G I + V E K+ E+
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRG--IEKTAKALVTELKKMSKEVED 195
Query: 507 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 656
L DVA S ++ +A+ ++ V+T+ GK + L++VE M+
Sbjct: 196 SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLE-EGKSAENNLYVVEGMQ 248
>At1g55490.1 68414.m06347 RuBisCO subunit binding-protein beta
subunit, chloroplast / 60 kDa chaperonin beta subunit /
CPN-60 beta identical to SWISS-PROT:P21240- RuBisCO
subunit binding-protein beta subunit, chloroplast
precursor (60 kDa chaperonin beta subunit, CPN-60 beta)
[Arabidopsis thaliana]
Length = 600
Score = 45.2 bits (102), Expect = 4e-05
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 8/174 (4%)
Frame = +3
Query: 159 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 326
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 78 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 137
Query: 327 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 506
V+L + + ++ G +P +IT G I + V E K+ E+
Sbjct: 138 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRG--IEKTAKALVTELKKMSKEVED 195
Query: 507 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 656
L DVA S ++ +A+ ++ V+T+ GK + L++VE M+
Sbjct: 196 SELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLE-EGKSAENNLYVVEGMQ 248
>At3g13470.1 68416.m01695 chaperonin, putative similar
SWISS-PROT:P21240- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Arabidopsis thaliana]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 596
Score = 42.3 bits (95), Expect = 3e-04
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Frame = +3
Query: 159 IQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARXXXXXX 326
+ D++ LGPKG +L S G +I DG + E++++ P A L+ +
Sbjct: 74 LADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTN 133
Query: 327 XXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEIAR 506
V+L + + ++ G +P +IT G + + L+ M E+
Sbjct: 134 DLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVNELKLMS--KEVED 191
Query: 507 ENLVDVARTSL--KTKVHPSLADVLTDACVDAVLTIRTPGKPVD--LHMVEIME 656
L DVA S +V +A+ ++ V+T+ GK + L++VE M+
Sbjct: 192 SELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLE-EGKSAENNLYVVEGMQ 244
>At1g26230.1 68414.m03200 chaperonin, putative similar to
SWISS-PROT:P08927- RuBisCO subunit binding-protein beta
subunit, chloroplast precursor (60 kDa chaperonin beta
subunit, CPN-60 beta) [Pisum sativum]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 611
Score = 37.5 bits (83), Expect = 0.008
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Frame = +3
Query: 144 SAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPT----ASLIARX 311
+ A + ++ LGPKG +L + G +I DG +L E++++ P L+ +
Sbjct: 57 AGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQA 116
Query: 312 XXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIP 491
++L L+ + IS G +P + G + K+L VLE +
Sbjct: 117 GAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIE-KTTKAL-VLELKSMS 174
Query: 492 IEIARENLVDVARTS 536
EI L VA S
Sbjct: 175 REIEDHELAHVAAVS 189
>At3g23990.1 68416.m03013 chaperonin (CPN60) (HSP60) identical to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana]
Length = 577
Score = 36.3 bits (80), Expect = 0.018
Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Frame = +3
Query: 105 EFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ--- 275
E +A A+ + + + D +K +GPKG ++ G K+TKDG + ++
Sbjct: 35 EIKFGVEARALMLKGVEDLADAVKVTMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKD 94
Query: 276 -IQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIAR 452
I++ ASL+ + +L + + ++ G++ + G +A
Sbjct: 95 KIKNVGASLVKQVANATNDVAGDGTTCATVLTRAIFAEGCKSVAAGMNAMDLRRGISMAV 154
Query: 453 NKSLEVLESMKIPIEIARE-NLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPV 629
+ + L+S I + E V + + ++ +A + + V+TI+ GK +
Sbjct: 155 DAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQ-DGKTL 213
Query: 630 --DLHMVEIMEM 659
+L +VE M++
Sbjct: 214 FNELEVVEGMKL 225
>At2g33210.1 68415.m04069 chaperonin, putative similar to
SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial
precursor (HSP60-2) [Cucurbita maxima]; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 585
Score = 35.1 bits (77), Expect = 0.042
Identities = 38/187 (20%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Frame = +3
Query: 123 QALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQ----IQHPT 290
+A A+ + + + D +K +GPKG ++ G K+TKDG + ++ I++
Sbjct: 42 EARALMLRGVEDLADAVKVTMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRIKNVG 101
Query: 291 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEV 470
ASL+ + +L + + ++ G++ + G +A + +
Sbjct: 102 ASLVKQVANATNDVAGDGTTCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTN 161
Query: 471 LESMKIPIEIARENLVDVARTSLK--TKVHPSLADVLTDACVDAVLTIRTPGKPV--DLH 638
L+S I + E + V S ++ +A + + V+TI+ GK + +L
Sbjct: 162 LQSRARMISTS-EEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQ-DGKTLFNELE 219
Query: 639 MVEIMEM 659
+VE M++
Sbjct: 220 VVEGMKI 226
>At3g59120.1 68416.m06591 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 602
Score = 33.9 bits (74), Expect = 0.096
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -1
Query: 636 ADQQVCLEFEW*VPHQRKHQLAHLPSLG 553
+ + +CL ++ PH +KH+ HLPS+G
Sbjct: 565 SSRPICLTCQYHCPHHKKHEKTHLPSIG 592
>At3g13860.1 68416.m01751 chaperonin, putative similar to
SWISS-PROT:P29197- chaperonin CPN60, mitochondrial
precursor (HSP60) [Arabidopsis thaliana] ; contains
Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
Length = 572
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 126 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQ 281
A A + + + +K +GPKG ++ S G KITKDG + + Q
Sbjct: 42 ARAAMLQGVSEVAEAVKVTMGPKGRNVIIESSYGGPKITKDGVTVAKSISFQ 93
>At1g67760.1 68414.m07732 T-complex protein 1 epsilon subunit,
putative / TCP-1-epsilon, putative / chaperonin,
putative similar to chaperonin containing TCP-1 (CCT)
epsilon subunit [Tetrahymena pyriformis] GI:15824416,
SP|P80316 T-complex protein 1, epsilon subunit
(TCP-1-epsilon) (CCT-epsilon) {Mus musculus}
Length = 142
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 114 RAAQALAVNISAAKGIQDVMKTNLGPKGTMK 206
+ A NISA K + +++++LGPKG K
Sbjct: 25 KGIDAQKANISAGKAVARILRSSLGPKGMEK 55
>At1g20740.1 68414.m02598 expressed protein ; expression supported
by MPSS
Length = 266
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +3
Query: 438 FDIARNKSLEVLESMKIPIEIARENLVDVARTSLKTKVHPSLADVLTDA 584
F+ A +++LE LES + P + A+ + D R H +AD+ +++
Sbjct: 85 FNGAESRTLEFLESNESPEDFAKSSAADYIRNKNTAAFHLIVADIASNS 133
>At3g45530.1 68416.m04917 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 692
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 170 YILNSFSCGYIYSKCLCSTSELGF 99
+I+ S+ G +Y C C +S+LG+
Sbjct: 630 FIMKSYDGGEVYCSCYCVSSQLGY 653
>At1g02080.1 68414.m00130 transcriptional regulator-related contains
Pfam PF04054: CCR4-Not complex component, Not1; contains
TIGRFAM TIGR01612: reticulocyte binding protein; similar
to General negative regulator of transcription subunit 1
(SP:P25655) {Saccharomyces cerevisiae}; Location of ESTs
gb|T44328 and gb|AA395265
Length = 2378
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 469 TSNDLLRAMSKPSVMILGCKPSLMNMSACLSSSP 368
TS+ L+ + K + IL C P L N A SS+P
Sbjct: 628 TSSQLVEEIEKVNAAILDCNPKLQNGEAKDSSAP 661
>At5g40780.2 68418.m04951 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 445
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 66 NEMAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPK---GTMKMLVSGAGDIK 236
N ++ +SL A + + +A SA+KG+Q+ ++ K GT+ SG GD+
Sbjct: 178 NSISGVSLA--AAVMSLSYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVA 235
Query: 237 ITKDGNVLLHEMQIQHPT 290
G+ ++ E+Q P+
Sbjct: 236 FAYAGHNVVLEIQATIPS 253
>At5g40780.1 68418.m04950 lysine and histidine specific transporter,
putative strong similarity to lysine and histidine
specific transporter GI:2576361 from [Arabidopsis
thaliana]; contains Pfam profile PF01490: Transmembrane
amino acid transporter protein
Length = 446
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 66 NEMAAISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPK---GTMKMLVSGAGDIK 236
N ++ +SL A + + +A SA+KG+Q+ ++ K GT+ SG GD+
Sbjct: 179 NSISGVSLA--AAVMSLSYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVA 236
Query: 237 ITKDGNVLLHEMQIQHPT 290
G+ ++ E+Q P+
Sbjct: 237 FAYAGHNVVLEIQATIPS 254
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,482,047
Number of Sequences: 28952
Number of extensions: 256065
Number of successful extensions: 657
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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