Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a24
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 129 3e-31
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 65 1e-11
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 57 3e-09
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 55 1e-08
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 50 3e-07
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 41 2e-04
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 34 0.023
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 30 0.28
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 29 0.49
SPBC3H7.15 |hhp1||serine/threonine protein kinase Hhp1|Schizosac... 29 0.64
SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces ... 29 0.64
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 29 0.85
SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3 |Schizosac... 28 1.1
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 28 1.5
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 28 1.5
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 28 1.5
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 27 2.0
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.0
SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase Pef1|... 27 2.0
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.0
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 27 2.6
SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces... 27 2.6
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.6
SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 27 3.4
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 27 3.4
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 3.4
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 27 3.4
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.5
SPAC12G12.05c |taf9||transcription initiation factor Taf9|Schizo... 26 4.5
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 4.5
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 26 4.5
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 26 6.0
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 25 7.9
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 25 7.9
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 7.9
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 25 7.9
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 129 bits (312), Expect = 3e-31
Identities = 62/112 (55%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Frame = +3
Query: 369 QEDSADYCKGGYHPVKIGDLFLNR-YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSA 545
+E++ DY GGYHPV IG+ F +R Y V RKLGWGHFSTVWL +D KR VALKVV+SA
Sbjct: 56 EENAEDYHYGGYHPVYIGEEFHHRRYVVERKLGWGHFSTVWLAYDRAAKRRVALKVVRSA 115
Query: 546 PHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFE 701
H+ ET++DEI+IL+ +R+ D + + LL+ F G NG HVCMVFE
Sbjct: 116 EHYRETSIDEIRILQKIREGDEKHLGKKHIISLLDYFVHRGPNGAHVCMVFE 167
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 64.9 bits (151), Expect = 1e-11
Identities = 36/99 (36%), Positives = 54/99 (54%)
Frame = +3
Query: 399 GYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEI 578
G++ V F NRY V R LG G F V C+D R A+KV ++ P + E +L E+
Sbjct: 348 GHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIEL 407
Query: 579 KILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMV 695
++L+ + SDPT+ NK +QL + F H+C+V
Sbjct: 408 RVLQTIAHSDPTN--ENKCIQLRDYFDYR----KHICIV 440
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 56.8 bits (131), Expect = 3e-09
Identities = 38/114 (33%), Positives = 57/114 (50%)
Frame = +3
Query: 360 DEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVK 539
DE E D G Y ++ GD L RY + +G G F V C D + VA+KV+K
Sbjct: 492 DECNEALFDDDNGDYKAIQ-GDHLLYRYEIIDTVGKGSFGQVLKCIDHKRGQVVAIKVIK 550
Query: 540 SAPHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFE 701
+ F L E+ IL+ + ++DP D +N ++ L+ F G H+C+V E
Sbjct: 551 NRQKFHGQTLVEVGILKRLCEADPAD--KNNVIRYLSHFDFRG----HLCIVTE 598
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 54.8 bits (126), Expect = 1e-08
Identities = 31/93 (33%), Positives = 48/93 (51%)
Frame = +3
Query: 339 DEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRF 518
D++ ++D+ + + G + V +GD RY V LG G F V C D +
Sbjct: 665 DKRRSADENTSSNFGFDDERGDYKVVLGDHIAYRYEVVDFLGKGSFGQVLRCIDYETGKL 724
Query: 519 VALKVVKSAPHFTETALDEIKILRAVRDSDPTD 617
VALK++++ F AL E KIL+ +R+ DP D
Sbjct: 725 VALKIIRNKKRFHMQALVETKILQKIREWDPLD 757
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 50.0 bits (114), Expect = 3e-07
Identities = 28/88 (31%), Positives = 48/88 (54%)
Frame = +3
Query: 438 RYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTD 617
+Y + LG G F V C DL ++ VA+KV+K+ P F + E+ IL + + +
Sbjct: 129 KYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQCVMEVSILELLNNKYDPE 188
Query: 618 PKRNKTVQLLNDFKITGVNGTHVCMVFE 701
KR+ ++L + F ++ H+C+VFE
Sbjct: 189 DKRH-LIRLYDQF----MHKNHLCLVFE 211
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 40.7 bits (91), Expect = 2e-04
Identities = 32/112 (28%), Positives = 57/112 (50%)
Frame = +3
Query: 366 EQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSA 545
+ +D+ D +G Y V + +L +RY V LG G FSTV D + A+K++++
Sbjct: 135 DMQDNWDDIEGYYKVVLMEELD-SRYIVQSNLGKGMFSTVVSALDRNRNQTFAIKIIRNN 193
Query: 546 PHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFE 701
+ L E+ IL ++ +D + K Q + ++ ++ H+CMVFE
Sbjct: 194 EVMYKEGLKEVSILERLQAAD----REGK--QHIIHYERHFMHKNHLCMVFE 239
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 33.9 bits (74), Expect = 0.023
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 417 IGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV---KSAPHFTETALDEIKIL 587
+G L YH+ KLG G F V+ D + ALK + F TA+ EIKIL
Sbjct: 28 VGCSHLTDYHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILMHTEKEGFPITAIREIKIL 87
Query: 588 RAVR 599
++++
Sbjct: 88 KSIK 91
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 30.3 bits (65), Expect = 0.28
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3
Query: 435 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEI 578
N Y + RKLG G F VW + V +A+K + ET +D+I
Sbjct: 7 NSYTLLRKLGSGSFGVVWKARENVSGDIIAIKQID-----LETGIDDI 49
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 29.5 bits (63), Expect = 0.49
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 411 VKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV--VKSAPHFTETALDEIKI 584
+KIG N+Y + RK+G G F ++L + V+ VA+K+ +K+ H E I
Sbjct: 6 IKIG----NKYRIGRKIGSGSFGQIYLGLNTVNGEQVAVKLEPLKARHHQLEYEFRVYNI 61
Query: 585 LR 590
L+
Sbjct: 62 LK 63
>SPBC3H7.15 |hhp1||serine/threonine protein kinase
Hhp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 365
Score = 29.1 bits (62), Expect = 0.64
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 435 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV 533
N+Y + RK+G G F ++L ++V VA+K+
Sbjct: 9 NKYRIGRKIGSGSFGDIYLGTNVVSGEEVAIKL 41
>SPCC1259.13 |chk1|rad27|Chk1 protein kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 496
Score = 29.1 bits (62), Expect = 0.64
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 441 YHVTRKLGWGHFSTVWLCWD 500
YH+ R++G G F++V LC+D
Sbjct: 10 YHIGREIGTGAFASVRLCYD 29
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 28.7 bits (61), Expect = 0.85
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 459 LGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIK 581
LG G+F V L V+K+F A+KV+K L+ +K
Sbjct: 670 LGKGNFGKVMLAEYKVNKKFYAIKVLKKEAILKNEELESLK 710
>SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1
Query: 638 YGFVSLRIGGIAVSHCSQYFNFVQSRLRKM 549
YGF+ I IAVSHCS + +QS L+++
Sbjct: 210 YGFLMTVIAFIAVSHCSVGHSELQSFLQEL 239
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 441 YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV-KSAPHFTETALDEIKILRAVRD 602
+ ++G G + +VWL K VALK++ KS H +DEI+ + RD
Sbjct: 208 FQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLH----KMDEIRHVLTERD 258
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 438 RYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVK 539
RY + + LG G F+ V+L ++ +++ ALK +K
Sbjct: 31 RYRIQKLLGEGGFAFVYLVQNVSNEKLYALKKIK 64
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLG 464
+ S SN ++E++ED D ++ED D + ++ GD + Y+V+R G
Sbjct: 1701 DAARSDSNNSMEDEED------DVDEEDKEDKNRTVMRSIESGDSIQDVYNVSRIFG 1751
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 27.5 bits (58), Expect = 2.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 212 NFVSFFLRLYGEYSSIYIRFRTH 144
NF +F L EY ++Y++F +H
Sbjct: 756 NFTDWFASLGSEYENVYVKFISH 778
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 306 SSSNETIEEDED--EQYTSDDEEQEDSAD 386
SS +E+ E DED E+ DD+E D D
Sbjct: 238 SSGSESYERDEDVDEEEEEDDDENNDEGD 266
>SPCC16C4.11 |pef1||Pho85/PhoA-like cyclin-dependent kinase
Pef1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 288
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +3
Query: 441 YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVK-SAPHFT-ETALDEIKILRAVR 599
Y KLG G ++ V+ + V VALKV++ A T TA+ EI +++ +R
Sbjct: 3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDADEGTPSTAIREISLMKELR 57
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSA 383
E ++ EE+EDE+ +DEE ED +
Sbjct: 101 EENEEEADANEEEEEDEEDDEEDEEDEDES 130
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 306 SSSNETIEEDEDEQYTSDDEEQEDSADYCKGG 401
+ +NE EEDE+ DDEE E+ D GG
Sbjct: 107 ADANEEEEEDEE-----DDEEDEEDEDESGGG 133
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 306 SSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTR 455
+S N ++ED+ +S+DEE E+ G Y P +I + ++ TR
Sbjct: 138 ASENNVVKEDDKSSISSEDEE-EELRSAKDGIYRPPRIRAVTMDSEKRTR 186
>SPAC2C4.14c |ppk11||PAK-related kinase Ppk11|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 312
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 435 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV--KSAPHFTETALDEIKIL 587
++Y + +G G F +V+ D+ + VALKVV + ET EI L
Sbjct: 4 HQYRDLQLIGQGSFGSVFRAQDVESSKIVALKVVDLDATKDQIETLTQEINFL 56
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 300 THSSSNETI--EEDEDEQYTSDDEEQEDSADYCKGG 401
T+ S E + EED+ E S+DEE ++S D + G
Sbjct: 341 TYDSEAEWVADEEDDGEDLESEDEEVDNSDDIVEDG 376
>SPBC8D2.19 |mde3||serine/threonine protein kinase
Mde3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 559
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 426 LFLNRYHVTRKLGWGHFSTVWL 491
+F +RY V +KLG G F TV+L
Sbjct: 16 IFEDRYLVKQKLGDGSFGTVYL 37
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 26.6 bits (56), Expect = 3.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 303 HSSSNETIEEDEDEQYTSDDEEQE 374
+SS + I+ED + +YT+D+ E+E
Sbjct: 11 NSSEDSDIQEDAELEYTADNPEKE 34
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 3.4
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 308 TMRWF*TILVL-VTQTVSLANS-PVFFLAIFLFTNFVSFFLRLYGEYSSIYIRFRTHLVV 135
T+ WF I +T + N+ + F IF FVSF + G YS + F+ V+
Sbjct: 53 TLGWFSVICAFSITGSGLEVNTMSIPFYLIFGIFAFVSFTTQYLGIYSFSFQPFQLLNVI 112
Query: 134 IISLSPI 114
I SLS +
Sbjct: 113 IASLSMV 119
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 456 KLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRD 602
KLG G + +VWL +A+K++K + T L+E+K + RD
Sbjct: 167 KLGQGGYGSVWLAKKRNTHELLAMKMMKKS---TLQQLNEVKHILNERD 212
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 26.2 bits (55), Expect = 4.5
Identities = 8/18 (44%), Positives = 17/18 (94%)
Frame = +3
Query: 327 EEDEDEQYTSDDEEQEDS 380
+++EDE+ ++D+E++EDS
Sbjct: 232 DDEEDEEGSADEEDEEDS 249
>SPAC12G12.05c |taf9||transcription initiation factor
Taf9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 163
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADY 389
+P SNET + E+ +SD +ED D+
Sbjct: 127 QPNWIVSNETQQNQPKEENSSDSRMEEDKLDF 158
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +3
Query: 306 SSSNETIEED--EDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLN 437
+S ET EE+ E+E ++EE+E+ +Y K+GDL L+
Sbjct: 346 TSRIETQEEEIKEEEMEGEEEEEEEEVPNYESENELEDKVGDLSLS 391
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQED 377
E + S E EE+E+E+ +DDE +E+
Sbjct: 306 EESASEEEEEEEEEEEEENEADDETREN 333
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 25.8 bits (54), Expect = 6.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = -3
Query: 381 HYPPAPRRRWCIAHLRLPQLFRWKNYALVLDDSGSGYADRF 259
H R W ++HL P FR+ + ++ +AD F
Sbjct: 217 HISSRKRSNWILSHLETPTPFRYSHDQKIMIFDRLSWADSF 257
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 SSSNETIEEDEDEQYTSDDEEQEDSAD 386
SSSN + ED+ +SD E + S D
Sbjct: 272 SSSNSSDSEDDSSSDSSDSESESSSED 298
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 441 YHVTRKLGWGHFSTVWLCWDLV-DKRFVALKVVK 539
Y+V RK+G G F +V+L K VA+K +K
Sbjct: 36 YNVVRKVGDGTFGSVYLATTKTPSKEVVAIKSMK 69
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.4 bits (53), Expect = 7.9
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 471 HFSTVWLCWDLVDKRFVA-LKVVKSAPHFTETALDEIKILRAVRDSD 608
H S+ WLC+ L+D A + +++ TE D + + R+ SD
Sbjct: 600 HVSSDWLCYALIDDITDAFVPLIRGIETETEAIEDSVLVGRSEDSSD 646
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 312 SNETIEEDEDEQYTSDDEEQEDS 380
S+ +EEDED+ +S +EE DS
Sbjct: 348 SDLDVEEDEDDVESSSNEEVSDS 370
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,709,983
Number of Sequences: 5004
Number of extensions: 54597
Number of successful extensions: 309
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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