Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a24
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 173 9e-44
SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08) 49 3e-06
SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10) 47 1e-05
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 34 0.13
SB_14881| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39) 33 0.22
SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36) 31 0.68
SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4) 31 1.2
SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 30 2.1
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 30 2.1
SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_33329| Best HMM Match : Mak16 (HMM E-Value=0.15) 29 2.8
SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79) 29 3.6
SB_50105| Best HMM Match : fn3 (HMM E-Value=1.5e-28) 29 3.6
SB_31067| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 29 4.8
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 29 4.8
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 4.8
SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10) 29 4.8
SB_19059| Best HMM Match : Arm (HMM E-Value=0.044) 29 4.8
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 4.8
SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_48343| Best HMM Match : CBF (HMM E-Value=1.3) 28 8.4
SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_39476| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7) 28 8.4
SB_54157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 173 bits (422), Expect = 9e-44
Identities = 74/120 (61%), Positives = 92/120 (76%)
Frame = +3
Query: 327 EEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLV 506
E+D + SDDEEQED DYCKGGYHPV++GDLF NRY V RKLGWGHFSTVWL WD+
Sbjct: 21 EDDYEVDENSDDEEQEDPNDYCKGGYHPVQLGDLFNNRYSVIRKLGWGHFSTVWLAWDVS 80
Query: 507 DKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHV 686
+ ++VALK+VKSA H+TETA+DE+K+LR V +DP VQL +DFKI G+NG+ +
Sbjct: 81 ENKYVALKIVKSASHYTETAIDEMKLLRTVHTADPKHHGHKHVVQLTDDFKIVGINGSRI 140
>SB_10690| Best HMM Match : Pkinase (HMM E-Value=6.4e-08)
Length = 865
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)
Frame = +3
Query: 399 GYHPVKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLV-DKRFVALKVVKSAPHFTETALDE 575
GY+ V+IG+L RY+V G G FS V D + V +K++++ +T L E
Sbjct: 649 GYYRVRIGELLDKRYNVYGFSGSGVFSNVVRARDQARGSQEVVVKIIRNNEMMHKTGLKE 708
Query: 576 IKILRAVRDSDPTDPKRNKTVQLLNDFKITGVNGTHVCMVFE 701
++ L+ + D+DP D + ++L F + H+C+VFE
Sbjct: 709 LEFLKKLNDADPDD--KYHCLRLYRHF----FHKNHLCLVFE 744
>SB_25257| Best HMM Match : Pkinase (HMM E-Value=4e-10)
Length = 892
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +3
Query: 411 VKIGDLFLNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILR 590
VK G+ + +RY + +G G F V +D +K +A+K++K+ F A E+K+L
Sbjct: 378 VKAGEKWFDRYEIESLIGKGSFGQVCKAYDHQEKEHIAVKIIKNKKPFLNQAQIEVKLLE 437
Query: 591 AVRDSDP 611
+ +DP
Sbjct: 438 LMNKNDP 444
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/89 (29%), Positives = 39/89 (43%)
Frame = +3
Query: 435 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPT 614
+RY V LG G F V CW VA+K++K P + EI IL +
Sbjct: 96 SRYEVLEFLGRGTFGQVVKCWKKGTNELVAIKILKDHPSYARQGQIEISILAKL---SAE 152
Query: 615 DPKRNKTVQLLNDFKITGVNGTHVCMVFE 701
+ + V+ + F+ + H C+VFE
Sbjct: 153 NSEAYNFVRAIECFQ----HKNHTCLVFE 177
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 432 LNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALK---VVKSAPHFTETALDEIKIL 587
+ Y R +G G + TV+LC LVD V +K V + ++AL+E+K+L
Sbjct: 1 MQNYEKVRIVGRGAYGTVYLCRRLVDNFLVIIKQIPVEEMTKEERQSALNEVKVL 55
>SB_14881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 420 GDLFLNRYHVTRKLGWGHFSTVWLCWDL 503
G ++ NRY V R+LG G F TV+L DL
Sbjct: 19 GRVYANRYRVVRRLGSGSFGTVFLVEDL 46
>SB_54232| Best HMM Match : Pkinase (HMM E-Value=1.1e-39)
Length = 1123
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = +3
Query: 432 LNRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKVVKSAPHFTE---TALDEIKILRAVR 599
+NRY +G G F + WL KR ALK + + +E AL+E+KIL ++
Sbjct: 1 MNRYQKIDIIGKGTFGSAWLVESRQSKRLYALKELNATAMPSEDRHLALNEVKILSTLK 59
>SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADY 389
E + S EEDE+E+ DD+ +DS+DY
Sbjct: 344 EDCQNKSGNNDEEDEEEESDDDDDNDDDSSDY 375
>SB_26437| Best HMM Match : Pkinase (HMM E-Value=3.6e-36)
Length = 436
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 435 NRYHVTRKLGWGHFSTVWLCWDLVDKRFVALKV 533
N+Y + LG G FS V+ +DLV+ R+VA K+
Sbjct: 166 NQYLLLSLLGKGGFSEVYKGYDLVNHRYVACKI 198
>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 31.1 bits (67), Expect = 0.90
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQED 377
E SS E +DEDE + DDEE+E+
Sbjct: 157 ESAEGSSEEEEMDDEDEDHDDDDEEEEE 184
>SB_32414| Best HMM Match : Osteopontin (HMM E-Value=2.4)
Length = 777
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 386
E T E IE E+ SDDEE+++SAD
Sbjct: 460 EKTSEKDEEDIESTISEKKDSDDEEEQESAD 490
>SB_23611| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 321 TIEEDEDEQYTSDDEEQEDSADY 389
T E+D+DE+ DDE+ ED DY
Sbjct: 18 TREDDDDEEEEDDDEDFEDEDDY 40
>SB_59616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 297 PTHSSSNETIEEDEDEQYTSDDEE 368
PT+ S +E E +DE+Y S DEE
Sbjct: 2201 PTYDSGDEQEESSDDEEYESADEE 2224
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 386
E +SS+E EED DE DD++++D +
Sbjct: 189 EAEEASSDEDEEEDSDEDDDEDDDDEDDEEE 219
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 441 YHVTRKLGWGHFSTVWLCWDLVDKRFVALKVV-KSAPHFTETAL-DEIKILRAVR 599
Y+ +KLG G+F+ V C D + ++ A+K++ K E + DEI I+R R
Sbjct: 447 YNFGQKLGDGNFAIVRQCKDKITQKEFAIKIIDKRKIRGKEKMIDDEIAIMRRCR 501
>SB_38330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 228 REEEHGAIXXXXXXXXXXXXXXEPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 386
REEE + E E EE+E+E+ ++EE+ED D
Sbjct: 128 REEEEEEVEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDD 180
>SB_6594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQY-TSDDEEQEDSADYCKGGYHPVKI 419
EP +S T +ED+D+Q S DEE +++D + Y PV +
Sbjct: 248 EPLKASEVFTDDEDDDDQESKSSDEESYEASDEEQAEYAPVPV 290
>SB_33329| Best HMM Match : Mak16 (HMM E-Value=0.15)
Length = 265
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 327 EEDEDEQYTSDDEEQEDSADYCKGG 401
++DE+E+ DDEE+ED + +GG
Sbjct: 113 DDDEEEEEDDDDEEEEDDDEDGEGG 137
>SB_28255| Best HMM Match : Curto_V2 (HMM E-Value=0.79)
Length = 364
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 303 HSSSNETIEEDEDEQYTSDDEEQEDSADY 389
+ +E E D+D+ DD++ +DS+DY
Sbjct: 326 NDEEDEEEESDDDDDDDDDDDDDDDSSDY 354
>SB_50105| Best HMM Match : fn3 (HMM E-Value=1.5e-28)
Length = 721
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 315 NETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRYHV 449
N+ ++D+D+ +DD++ +D D GG P+ +F+ Y +
Sbjct: 498 NDDDDDDDDDDADNDDDDDDDDYD-DDGGLLPLDTDTIFVTWYSI 541
>SB_31067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 29.1 bits (62), Expect = 3.6
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +3
Query: 300 THSSSNETIEEDEDEQYTSDDEEQEDSAD 386
T++++N+ + +D+D+ DD++ +D D
Sbjct: 7 TNNNNNDNVNDDDDDDDDDDDDDDDDDDD 35
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/28 (28%), Positives = 18/28 (64%)
Frame = +3
Query: 303 HSSSNETIEEDEDEQYTSDDEEQEDSAD 386
+ N+ +D+D++Y DDE++E+ +
Sbjct: 139 NGEDNDDSNDDDDDEYLDDDEDEEEEEE 166
>SB_26321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 336 EDEQYTS--DDEEQEDSADYCKGGYHPVKIG 422
+D++Y S DD E ED ++ KG Y+ + G
Sbjct: 49 DDDEYRSIDDDGEDEDGSNKAKGAYYQIPYG 79
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 372 PAPRRRWCIAHLRLPQLFRWKNYALVLDD 286
PAP W + +++LPQ ++ Y++ DD
Sbjct: 769 PAPTVTWYLGNVKLPQNAKYPGYSVTRDD 797
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 327 EEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDL 428
++DE+E+ +DD++ +D D Y+ GDL
Sbjct: 223 DDDEEEEDDADDDDDDDDDDDDNDDYNETNNGDL 256
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 386
E E + EDEDE+ DEE+E+ D
Sbjct: 1803 EEMDDEEGEEMMEDEDEEADKGDEEEEEEGD 1833
>SB_37671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 330 EDEDEQYTSDDEEQEDSADYCKGGYHPVKIGD 425
+D+DEQ+ DE ++D D+ H K GD
Sbjct: 388 DDKDEQHDDKDEHRDDKDDHHDEDEHDEKKGD 419
>SB_33267| Best HMM Match : F5_F8_type_C (HMM E-Value=3.4e-10)
Length = 1292
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 309 SSNETIEEDEDEQYTSD-----DEEQEDSADYCKGGYHPVKIGDLFLNRYHVTRKLGWGH 473
+S + EDE D DE+ S H ++ ++ +N +H + + H
Sbjct: 1041 TSKRCVPEDEPALGVEDRNRIRDEQMAASTHAPYADAHQARLNNVHVNGHHYSSWIAQTH 1100
Query: 474 FSTVWLCWDLVDKRFVALKVVKSAPHFTE 560
+ WL DLV+ VA + + F +
Sbjct: 1101 DTNQWLKIDLVNVTKVACVATQGSQEFQD 1129
>SB_19059| Best HMM Match : Arm (HMM E-Value=0.044)
Length = 603
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 495 WDLVDKRFVALKVVKSAPHFTETALDEIKILRAV-RDSDPTDPKRNKTV-QLLNDFKITG 668
W+++DKR + K SA +A +IL+ V + D DPK + +L+ K+TG
Sbjct: 221 WNVLDKRGMIGKSSGSA-----SARRRGEILKTVFKFLDINDPKLILRLGRLILSMKVTG 275
Query: 669 VNGTHVCMV 695
N T++CMV
Sbjct: 276 NNITNICMV 284
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 294 EPTHS--SSNETIEEDEDEQYTSDDEEQEDS--ADYCKGGYHPVKIGDLF-LNRYHVTRK 458
+P H S +E ++ +D+ +TSDD+ S AD G Y +I F +H+ RK
Sbjct: 545 DPDHIPLSKSEYLDGLKDDVFTSDDDSDVSSIIADSTSGEYDEPEISSPFHFTHFHLKRK 604
>SB_36720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 327 EEDEDEQYTSDDEEQEDSADYCKGGYH 407
++D+D+ +D++ +D D+ K YH
Sbjct: 120 DDDDDDDEEDEDDDDDDDDDFYKSQYH 146
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 11/64 (17%)
Frame = +3
Query: 303 HSSSNETIEEDEDEQYTSDDEEQEDS-----------ADYCKGGYHPVKIGDLFLNRYHV 449
H + TI++D +Q S+ E +DS AD+ KG Y V+ G NR V
Sbjct: 248 HGQFDSTIDQDLVKQILSESSESKDSRKSVDLRRSETADWIKGSYRTVESGSYSGNRMSV 307
Query: 450 TRKL 461
L
Sbjct: 308 HEDL 311
>SB_48343| Best HMM Match : CBF (HMM E-Value=1.3)
Length = 669
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSAD 386
E H + +++D+DE DD+E +D D
Sbjct: 160 EERHHHRHSNVDDDDDECDDDDDDEDDDDDD 190
>SB_40374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 342 EQYTSDDEEQEDSADYCKGGYHPVKIGD 425
+ Y DD+ +D Y GGY IGD
Sbjct: 54 DDYDDDDDNDDDDDGYDDGGYDDDDIGD 81
>SB_39476| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 315 NETIEEDEDEQYTSDDEEQEDSADYCKGGYH 407
N +ED D + T+D E+ EDS G H
Sbjct: 272 NNLDDEDSDAEETADQEDSEDSLSRLMKGKH 302
>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1735
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/49 (24%), Positives = 28/49 (57%)
Frame = +3
Query: 297 PTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYHPVKIGDLFLNRY 443
P +++N+ +++ED+ T DD++ +D+ D P I ++ ++ Y
Sbjct: 464 PRETNNNKAAKDNEDDDVT-DDDDSDDANDIGVQPTVPYNISNMAIHAY 511
>SB_26436| Best HMM Match : Somatomedin_B (HMM E-Value=3.7)
Length = 233
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 312 SNETIEEDEDEQYTSDDEEQEDSADY 389
S E+ ++DE+E+ ++EE+ED Y
Sbjct: 9 SYESDDDDEEEEEEEEEEEEEDDVTY 34
>SB_54157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 306 SSSNETIEEDEDEQYTSDDEEQEDSAD 386
SSS + +D+D+ Y D+++ +D D
Sbjct: 75 SSSGMLMNDDDDDDYNDDEDDNDDDDD 101
>SB_50147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +3
Query: 294 EPTHSSSNETIEEDEDEQYTSDDEEQEDSADYCKGGYH 407
+PT S + + + D D +Y ++E++ D + K +H
Sbjct: 424 QPTTSPATKAPKHDSDAKYNEEEEDEWDPFGFFKNFWH 461
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/59 (37%), Positives = 28/59 (47%)
Frame = +3
Query: 486 WLCWDLVDKRFVALKVVKSAPHFTETALDEIKILRAVRDSDPTDPKRNKTVQLLNDFKI 662
WLC DL+ R V L + PHF E L + K RD + V+LLN F+I
Sbjct: 835 WLC-DLM-ARIVTLPIAN--PHFKEGILSKDKFEFIFRDETFPYEYYTQFVRLLNRFQI 889
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,183,110
Number of Sequences: 59808
Number of extensions: 403015
Number of successful extensions: 4660
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3743
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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