Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a23
(271 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 140 4e-33
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 134 4e-31
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 122 1e-27
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 119 1e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 117 6e-26
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 116 8e-26
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 7e-17
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 83 9e-16
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 78 4e-14
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 73 1e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 68 4e-11
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 65 3e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 64 4e-10
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 56 2e-07
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 52 3e-06
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 7e-04
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.014
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 36 0.13
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.31
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 0.41
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1; Os... 31 5.0
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 31 5.0
UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1; Bdellovi... 31 6.6
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 30 8.8
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 30 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 140 bits (340), Expect = 4e-33
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 134 bits (324), Expect = 4e-31
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GKI
Sbjct: 125 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGKI 184
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 185 VVNLTGRLNK 194
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 122 bits (295), Expect = 1e-27
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +1
Query: 79 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 258
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 259 RLNK 270
RLNK
Sbjct: 234 RLNK 237
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 119 bits (286), Expect = 1e-26
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GKI
Sbjct: 2 VRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKI 61
Query: 241 VVNLTGRLNK 270
VV L GRLNK
Sbjct: 62 VVELNGRLNK 71
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 117 bits (281), Expect = 6e-26
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK+
Sbjct: 2 VRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGKM 60
Query: 241 VVNLTGRLNK 270
VV LT RLNK
Sbjct: 61 VVYLTDRLNK 70
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 116 bits (280), Expect = 8e-26
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
V MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRAGK+
Sbjct: 100 VEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRAGKM 159
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 160 VVNLTGRLNK 169
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 56.8 bits (131), Expect(2) = 7e-17
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +1
Query: 91 KSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 189
+S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 44 ESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 50.8 bits (116), Expect(2) = 7e-17
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1
Query: 190 GYIGEFEIVDDHRAGKIVVNLTGRLNK 270
GYI EFE +DDHRAGKIVV L GR+NK
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINK 133
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 83.4 bits (197), Expect = 9e-16
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +1
Query: 67 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
+N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGKI+V
Sbjct: 4 INPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIV 63
Query: 247 NLTGRLNK 270
L GR+NK
Sbjct: 64 QLLGRINK 71
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.8 bits (183), Expect = 4e-14
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +1
Query: 67 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG V
Sbjct: 4 LDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRV 63
Query: 247 NLTGRLNK 270
L GR+NK
Sbjct: 64 QLLGRINK 71
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.3 bits (172), Expect = 1e-12
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +1
Query: 73 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 252
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 253 TGRLN 267
GR+N
Sbjct: 65 QGRVN 69
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.1 bits (159), Expect = 4e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
V ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 2 VLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIY 61
Query: 241 VVNLTGRLNK 270
V L GR+NK
Sbjct: 62 SVTLVGRINK 71
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 64.9 bits (151), Expect = 3e-10
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = +1
Query: 76 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 255
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 256 GRLNK 270
GRLN+
Sbjct: 65 GRLNR 69
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 64.5 bits (150), Expect = 4e-10
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +1
Query: 67 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 247 NLTGRLN 267
L+G +N
Sbjct: 63 ELSGNIN 69
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 55.6 bits (128), Expect = 2e-07
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +1
Query: 70 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK V+
Sbjct: 5 NILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGKFSVH 64
Query: 250 LTGRLNK 270
L ++ K
Sbjct: 65 LLAKITK 71
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 52.0 bits (119), Expect = 3e-06
Identities = 25/64 (39%), Positives = 35/64 (54%)
Frame = +1
Query: 79 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 258
++AL + NAE G + P S +I L V+ GY+ FE VDD +AGK V L G
Sbjct: 25 TNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKG 84
Query: 259 RLNK 270
+N+
Sbjct: 85 AINE 88
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.0 bits (99), Expect = 7e-04
Identities = 18/67 (26%), Positives = 37/67 (55%)
Frame = +1
Query: 70 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 250 LTGRLNK 270
L+ N+
Sbjct: 64 LSEYFNE 70
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.014
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 196 IGEFEIVDDHRAGKIVVNLTGRLNK 270
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 166 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNK 270
F+TV MK G+FEIVD+ G+I V+L G LNK
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.31
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 70 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 213
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 0.41
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 76 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 207
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 1.2
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 61 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 231
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_A4GJ62 Cluster: Putative uncharacterized protein; n=1;
uncultured Nitrospinaceae bacterium|Rep: Putative
uncharacterized protein - uncultured Nitrospinaceae
bacterium
Length = 284
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 109 EKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHR 228
E+ GK ++ +K V F T KH Y EFE++D R
Sbjct: 76 EEHGKYFSVLEASTKGFVGFFTAYRKHYYKTEFEVIDKGR 115
>UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1;
Ostreococcus tauri|Rep: Mitochondrion, complete genome -
Ostreococcus tauri
Length = 124
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 67 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYI 198
M +L+ S+ N + ++Q++ P SK LTV++ HGYI
Sbjct: 1 MKLLTQMFTSLRNGQM-SRKQIVHMPYSKFCWNVLTVLLFHGYI 43
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza
sativa|Rep: Os01g0153200 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1139
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 214 VDDHRAGKIVVNLTGRLNK 270
VDDH++G+I++ GRLNK
Sbjct: 912 VDDHKSGEIILEFDGRLNK 930
>UniRef50_Q6MJ26 Cluster: 30S ribosomal protein S8; n=1;
Bdellovibrio bacteriovorus|Rep: 30S ribosomal protein S8
- Bdellovibrio bacteriovorus
Length = 129
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 67 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
M+ +S L I NA K + + P SKV +++ G+I F++ D + G + V
Sbjct: 1 MDTISQFLTMIRNAGA-AKHEKVDMPASKVRAGIAQILVNEGFIRSFKVAKDSKQGIMRV 59
Query: 247 NL 252
L
Sbjct: 60 YL 61
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1
Query: 70 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 249
++++D+L I NA R + +K++V L V + G+I ++++D + GK +N
Sbjct: 4 DIIADSLTRIRNAAMRRLDYTTLY-YAKIVVSILEVFLAKGFIESYKVID--KDGKQSIN 60
Query: 250 L 252
+
Sbjct: 61 V 61
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 76 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 252
+S+ + + NA++ + V I P SK+ ++++ GYI F +DD + G + V L
Sbjct: 8 VSNYMAQLRNAQEAEQTYVDI-PASKLKRAMTQILLEKGYIKNFVNIDDEKQGLLRVYL 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,961,715
Number of Sequences: 1657284
Number of extensions: 2783215
Number of successful extensions: 5341
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5340
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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