Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a23
         (271 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.21 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   1.5  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           21   8.0  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           21   8.0  
EF519526-1|ABP73589.1|  250|Anopheles gambiae APL2 protein.            21   8.0  
EF519523-1|ABP73586.1|  250|Anopheles gambiae APL2 protein.            21   8.0  
EF519522-1|ABP73585.1|  250|Anopheles gambiae APL2 protein.            21   8.0  
EF519521-1|ABP73584.1|  250|Anopheles gambiae APL2 protein.            21   8.0  
EF519519-1|ABP73582.1|  250|Anopheles gambiae APL2 protein.            21   8.0  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 168 KLNDDFGTGPDEDLSFPSLFS 106
           +L DDF TGPD + + P++FS
Sbjct: 609 ELRDDFPTGPDPNFN-PNIFS 628


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +1

Query: 67  MNVLSDALKSIHNAEKRGKRQVLIRPCSKV 156
           +N+L+ +      A+KR + Q L+R C K+
Sbjct: 602 LNLLNRSTDHALLAQKRQEHQRLVRECDKI 631


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 143 GLMRTCLFPRFSALCIDFKASL 78
           G++RT   P++    IDF  SL
Sbjct: 118 GVLRTVEHPQYDGNTIDFDFSL 139


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 143 GLMRTCLFPRFSALCIDFKASL 78
           G++RT   P++    IDF  SL
Sbjct: 118 GVLRTVEHPQYDGNTIDFDFSL 139


>EF519526-1|ABP73589.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 154 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           V  K +T+ +    I EF+     R GK+V+
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVL 229


>EF519523-1|ABP73586.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 154 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           V  K +T+ +    I EF+     R GK+V+
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVL 229


>EF519522-1|ABP73585.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 154 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           V  K +T+ +    I EF+     R GK+V+
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVL 229


>EF519521-1|ABP73584.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 154 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           V  K +T+ +    I EF+     R GK+V+
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVL 229


>EF519519-1|ABP73582.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 154 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 246
           V  K +T+ +    I EF+     R GK+V+
Sbjct: 199 VFXKLITLDLSFNRIREFDFRSAXRFGKLVL 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,590
Number of Sequences: 2352
Number of extensions: 2831
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 15293985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)