Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11a23
(271 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 140 5e-34
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 140 5e-34
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 140 5e-34
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 140 5e-34
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 140 5e-34
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 140 5e-34
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 140 5e-34
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 139 1e-33
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 106 1e-23
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 40 0.001
BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein. 27 8.1
AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens ... 27 8.1
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 140 bits (340), Expect = 5e-34
Identities = 66/70 (94%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 139 bits (337), Expect = 1e-33
Identities = 65/70 (92%), Positives = 70/70 (100%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGKI 61
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 62 VVNLTGRLNK 71
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 106 bits (255), Expect = 1e-23
Identities = 54/70 (77%), Positives = 59/70 (84%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKI 240
VRMNVL+DALKSI+NAEKRGKR+ L+ LTVMMKHGYIGEFEI+DDHRAGKI
Sbjct: 2 VRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGKI 60
Query: 241 VVNLTGRLNK 270
VVNLTGRLNK
Sbjct: 61 VVNLTGRLNK 70
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 61 VRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 168
V MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 2 VHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>BC028423-1|AAH28423.1| 1022|Homo sapiens PMFBP1 protein protein.
Length = 1022
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 246 YNNLASSVIINDFKLSDVTVLHHHC*KLNDD 154
Y +L I + + SD+ +LHHHC KL +D
Sbjct: 108 YYSLRQYQSILEKQTSDLVLLHHHC-KLKED 137
>AK093285-1|BAC04121.1| 797|Homo sapiens protein ( Homo sapiens
cDNA FLJ35966 fis, clone TESTI2012628, moderately
similar to Mus musculus STAP mRNA for sperm tail
associated protein. ).
Length = 797
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 246 YNNLASSVIINDFKLSDVTVLHHHC*KLNDD 154
Y +L I + + SD+ +LHHHC KL +D
Sbjct: 108 YYSLRQYQSILEKQTSDLVLLHHHC-KLKED 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,959,168
Number of Sequences: 237096
Number of extensions: 368565
Number of successful extensions: 415
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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