Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a21
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.4  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 407 PEEKAKIELNPKDILYKAVENCKPLLQLQPIKRGGI 514
           P+E+A   L   DIL   V   K +L ++ ++ G +
Sbjct: 267 PQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 302


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 407 PEEKAKIELNPKDILYKAVENCKPLLQLQPIKRGGI 514
           P+E+A   L   DIL   V   K +L ++ ++ G +
Sbjct: 182 PQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 217


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 407 PEEKAKIELNPKDILYKAVENCKPLLQLQPIKRGGI 514
           P+E+A   L   DIL   V   K +L ++ ++ G +
Sbjct: 501 PQEEACFRLLMNDILRPYVPEFKGVLDVKDVEEGNV 536


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +2

Query: 329 LARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQP 496
           +A Q+  + +E   R +    H A+    +  ++      +++A+  C+P + L+P
Sbjct: 66  IAVQIDGQTYEGKGRTKKMAKHAAAELALRNIVQFRNTPEVHQAINTCQPSIPLEP 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,283
Number of Sequences: 438
Number of extensions: 3832
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)