Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a18
         (712 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q944H7 Cluster: AT3g07900/F17A17_24; n=6; Arabidopsis t...    39   0.14 
UniRef50_Q0IGB6 Cluster: Putative uncharacterized protein; n=1; ...    36   0.98 
UniRef50_Q4HIX8 Cluster: Flagellar hook protein FlgE; n=1; Campy...    35   2.3  
UniRef50_Q7P2Z8 Cluster: Putative uncharacterized protein FNV194...    34   4.0  
UniRef50_P96665 Cluster: YdeH protein; n=2; Bacillus|Rep: YdeH p...    33   5.2  
UniRef50_A4WKN7 Cluster: Putative uncharacterized protein precur...    33   6.9  
UniRef50_Q55ET2 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  

>UniRef50_Q944H7 Cluster: AT3g07900/F17A17_24; n=6; Arabidopsis
           thaliana|Rep: AT3g07900/F17A17_24 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 313

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 22/81 (27%), Positives = 41/81 (50%)
 Frame = +1

Query: 247 QLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEVPEVKPQHNPDAKEP 426
           +L TA++ + SN +    +  +N  E+ +++  R L +P   R+     +P    +A +P
Sbjct: 123 ELLTAKSSMTSNERKLAGLCPLNAKEVTRLL--RALGAPRDARIYWAGGEPLGGKEALKP 180

Query: 427 INTNVPHVVNNYFIVSPEYLK 489
           + +  PH+ N Y I  P  LK
Sbjct: 181 LTSEFPHLYNKYDIALPLELK 201


>UniRef50_Q0IGB6 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1053

 Score = 35.9 bits (79), Expect = 0.98
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 205 LSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIVKVILSRVLTS 360
           +   Y  +K  P N +    N++  NN Y+P+I+SI+   +  VI  + LTS
Sbjct: 164 MQGLYAMAKERPKNPVIWLSNWLLLNNPYKPMITSIHTEPLYDVIAKQDLTS 215


>UniRef50_Q4HIX8 Cluster: Flagellar hook protein FlgE; n=1;
           Campylobacter lari RM2100|Rep: Flagellar hook protein
           FlgE - Campylobacter lari RM2100
          Length = 814

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 265 NYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEVPEVKPQHNPDAKEPINTNVP 444
           N  A NN     I   N N I+K  +  V    +++     ++ P  NP+A  P N N+P
Sbjct: 389 NRTAFNNNPMAAILGTNANNIMKNNVQVVTAHEYIYSKNGVDIGPNPNPNANPPENANMP 448


>UniRef50_Q7P2Z8 Cluster: Putative uncharacterized protein FNV1941;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV1941 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 637

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 181 YQTNGYTQLSNTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNE 324
           Y  NG  +L NTY   K +   +    +N +  NN Y   ISSIN N+
Sbjct: 228 YDNNGNLELENTYKNGKLVDTKEYDIEKNILNKNNNY---ISSINNNQ 272


>UniRef50_P96665 Cluster: YdeH protein; n=2; Bacillus|Rep: YdeH
           protein - Bacillus subtilis
          Length = 148

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = -3

Query: 545 SGFVSGFLSFTFLKTVSLSFKYSGDTIK*LLTTCGTLVFIGSFASGLC*G 396
           SG    F+ FTFL  + + F      +  L++  GTLV I S A  LC G
Sbjct: 93  SGVYQCFIVFTFLGLIPIGFLIPNGFLTILVSIAGTLVSIASVAVTLCIG 142


>UniRef50_A4WKN7 Cluster: Putative uncharacterized protein
           precursor; n=1; Pyrobaculum arsenaticum DSM 13514|Rep:
           Putative uncharacterized protein precursor - Pyrobaculum
           arsenaticum (strain DSM 13514 / JCM 11321)
          Length = 677

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +1

Query: 256 TAQNYVASNNQYQPLISSINPNEIVKVILSRVLTSPHVHRVEV-PEVKPQHNPDAKEPIN 432
           TA NY AS  + +P++  I   ++   +L    +     RV + P   P + P   + + 
Sbjct: 406 TASNYTASLVEPKPILPPIPTTDVGINVLECTGSQCSERRVVIRPPPSPPYWPPVFDVVI 465

Query: 433 TNVPHVVNNYFIVSPEYLKL 492
           T     +NN F+VSP  L++
Sbjct: 466 TPKGESLNNVFVVSPAELRV 485


>UniRef50_Q55ET2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 281

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
 Frame = +1

Query: 211 NTYTPSKNIPCNQLATAQNYVASNNQYQPLISSINPNEIV---KVILSRVLTSPHVH--- 372
           +T TP  + P +Q  T +N   +  +   +I+   P E +   +VI+++ L +P      
Sbjct: 78  STETPQPSAPIDQPKTTENEQQAEEKEDIVITEKQPIENIVDDEVIITKDLPAPTPKPSK 137

Query: 373 RVEVPEVKPQHNPDAKEPINTNVPHV 450
             +VP+ K + N D      TN P V
Sbjct: 138 EEDVPKAKEEQNNDTTTTTTTNTPTV 163


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,529,237
Number of Sequences: 1657284
Number of extensions: 8159096
Number of successful extensions: 20319
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20278
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)