Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a18
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.53 
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   1.2  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   1.2  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   1.2  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   1.2  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   2.2  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.4 bits (53), Expect = 0.53
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 447 VWHISVYWFLCVRIVL 400
           +W +S+YW+L ++I L
Sbjct: 6   IWLVSLYWYLILQIAL 21


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 83  SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 83  SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 83  SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 83  SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 113


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 346


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 305 SSLSNNYNYNNYNNNYKPLYYNINYIEQIPV 335


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 NQLATAQNYVASNNQYQPLISSINPNEIVKV 336
           + L+   NY   NN Y+PL  +IN  E + V
Sbjct: 316 SSLSNNYNYNNYNNNYKPLHYNINYIEQIPV 346


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,443
Number of Sequences: 438
Number of extensions: 2825
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)