Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11a17
         (756 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)              109   2e-24
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)                     31   1.0  
SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0)                26   1.6  
SB_25162| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.3  
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)                 25   3.6  
SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)                29   5.4  
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_36225| Best HMM Match : Acetyltransf_1 (HMM E-Value=9)              28   9.4  

>SB_25798| Best HMM Match : FA_desaturase (HMM E-Value=0)
          Length = 268

 Score =  109 bits (263), Expect = 2e-24
 Identities = 54/147 (36%), Positives = 85/147 (57%)
 Frame = +2

Query: 314 MTTGAHRLWAHRTYKASTELRIVLMLLQTLAGVGPIYNWVRHHRLHHAHFATENDPFDYN 493
           +T GAHRLWAHRT+KA   LR+V+ML+ ++A    I+ W R HR+HH +  T+ DP +  
Sbjct: 20  VTIGAHRLWAHRTFKAKWPLRLVIMLMNSMAAQNDIFEWSRDHRVHHKYSETDADPHNAK 79

Query: 494 QGFAYAHIFTRMRKLSPYQEKLKESIDMSDLENDSVVMFQKTLYWFMYATXXXXXXXXXX 673
           +GF ++H+   M++  P   +  + ID+SDL  DSVVMFQ+  ++   +           
Sbjct: 80  RGFFFSHVGWLMQRKHPDVIRKGKGIDLSDLYADSVVMFQRR-HYKKISMLMCVLIPTLV 138

Query: 674 XEYWEDSVLSSVFVIGFLRYFILLHAS 754
              W +S+ ++ F    LRY I L+ +
Sbjct: 139 PSLWGESLWNAYFTSFALRYVITLNVT 165


>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
          Length = 1656

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +2

Query: 437  HHRLHHAHFATENDPFDYNQGFAYAHIFTRMRKLSPYQEKLKE 565
            HHR HH H   E   + Y     Y H+   M K       LKE
Sbjct: 1389 HHRRHHHHSRPEVPDYSYGHTKYYLHLKKLMEKYMDKTTNLKE 1431


>SB_45869| Best HMM Match : ANF_receptor (HMM E-Value=0)
          Length = 939

 Score = 26.2 bits (55), Expect(2) = 1.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 358 FVSTVRPKSMSSGRHCEY 305
           ++ST RP S  +GR C+Y
Sbjct: 778 YISTCRPNSQLAGRVCQY 795



 Score = 22.6 bits (46), Expect(2) = 1.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 508 VCETLIVVKWIIL 470
           +CE ++V+ W++L
Sbjct: 751 LCEVIVVILWVVL 763


>SB_25162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 435

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +2

Query: 356 KASTELRIVLMLLQTLAGVGPIYNWVRHHRL-HHAHFATENDPFDYNQGFAYAHIFTRMR 532
           K S+ LRI L +L  L+G+  I  +V H R   H  F  + + F Y + FAY   F  + 
Sbjct: 214 KGSSALRI-LSVLCILSGLRIIERFVYHERFGDHERFG-DLERFVYLERFAYLERFVYIE 271

Query: 533 KLSPYQEKLKESIDMSDLE 589
           + +  +E  K   D ++L+
Sbjct: 272 RFAFLEEYCKNG-DFTNLD 289


>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
          Length = 839

 Score = 25.4 bits (53), Expect(2) = 3.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 377 IVLMLLQTLAGVGPIYNWVRHHRLHHAH 460
           I+++++       P ++ + HHR HH H
Sbjct: 555 IIIVIIIIAISTHPHHHHLHHHRHHHRH 582



 Score = 22.2 bits (45), Expect(2) = 3.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 434 RHHRLHHAHF 463
           RHH  HH H+
Sbjct: 581 RHHHYHHHHY 590


>SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)
          Length = 759

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +2

Query: 527 MRKLSPYQEKLKESIDMSDLEND 595
           +RK++PY++KLK    +S L ND
Sbjct: 261 IRKINPYRDKLKRKAMVSKLRND 283


>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1560

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +1

Query: 283  NNIDISRHTRNDDRSSSTLGAPYLQSKHRIAHCSNAASDFS 405
            NN+ + RH R D R      A Y   +HR+  C N  S+FS
Sbjct: 1360 NNL-LHRHARGDARGH----ACYCGHEHRLRECGNKDSNFS 1395


>SB_36225| Best HMM Match : Acetyltransf_1 (HMM E-Value=9)
          Length = 336

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 296 FPAILAMTTGAHRLWAHRTYKASTELRIVLMLLQTLAGVGPIYNWVRHHRL 448
           +P ++   TG + LW    YK+     +V ++ + LA V P   W R +R+
Sbjct: 134 YPTLVIRGTGLYELWKTGRYKSYPPNTLVDLIARILALVPP---WTRVYRV 181


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,927,752
Number of Sequences: 59808
Number of extensions: 431549
Number of successful extensions: 1001
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)